HHsearch results for GI: 254780191 and protein with PDBid: 3a5y_A
>3a5y_A GENX, putative lysyl-tRNA synthetase; aminoacyl-tRNA synthetase paralog, translation, lysyl- synthetase, lysyladenylate analog; HET: KAA; 1.90A {Escherichia coli} PDB: 3a5z_A* 3g1z_A*
Probab=91.74 E-value=0.11 Score=30.24 Aligned_cols=95 Identities=19% Similarity=0.224 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHCCCEECCCCCCCCCCCCCHHEEECCCCCCC------------CCCCCCCC---------CCCCCCCC
Q ss_conf 8999999999997898891166756677871002301434755------------40058879---------99998511
Q gi|254780191|r 5 SSIRTTFLEFFQKNGHELLPSSSLIPCNDPTLMFTNSGMVPFK------------NIFTGQEK---------PVYQAVTT 63 (898)
Q Consensus 5 ~eiR~~fl~fF~~~~H~~~~s~slvp~~d~~llft~Agm~~fk------------~~f~G~~~---------p~~~r~~~ 63 (898)
++|-+..-+||.++|-.-|..--|++...+ .|...+|+ +.+|-+.+ ....|+-.
T Consensus 40 s~i~~~iR~ff~~~gF~EV~TPiL~~~~~~-----ga~~~pf~~~~~~~~~~~~~~~yL~~SpQl~lq~l~~~g~~rVf~ 114 (345)
T 3a5y_A 40 AAIMAEIRRFFADRGVLEVETPCMSQATVT-----DIHLVPFETRFVGPGHSQGMNLWLMTSPEYHMKRLLVAGCGPVFQ 114 (345)
T ss_dssp HHHHHHHHHHHHHTTCEECCCCSEESSCCC-----CTTCCCCEEEECCSTTSCCEEEEECSCSHHHHHHHHHTTCCSEEE
T ss_pred HHHHHHHHHHHHHCCCEEEECCCCCCCCCC-----CCCCCCEEEEECCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCEE
T ss_conf 999999999998889789879864788987-----645661688723666667857775548799999999679987279
Q ss_pred CCCCEECCCCCCCHHHCCCCCCCHHHHHHHHH-HHHCCCCHHHHHHHHHHHHH
Q ss_conf 15432248987863434648850017888542-23147537889998998613
Q gi|254780191|r 64 VQKCVRAGGKHNDLDNVGRTNRHHTFFEMLGN-FSFGGYFKERAIQLAWDLLT 115 (898)
Q Consensus 64 ~QkCiR~ggkhnDld~VG~t~rH~TfFEMlGn-~SfgdYfK~eai~~awe~lt 115 (898)
.-||.|+. + .+.||++=|-||== .+|.|| ++.+...=+++.
T Consensus 115 I~p~FR~E----~-----~~~~H~~EFtmlE~e~a~~d~--~dlm~~~E~li~ 156 (345)
T 3a5y_A 115 LCRSFRNE----E-----MGRYHNPEFTMLEWYRPHYDM--YRLMNEVDDLLQ 156 (345)
T ss_dssp EEEEECCC----C-----CBTTBCSEEEEEEEEEETCCH--HHHHHHHHHHHH
T ss_pred EECCCCCC----C-----CCCCCCCCEEEEEEEECCCCH--HHHHHHHHHHHH
T ss_conf 83453269----9-----898857634553443247999--999999999999