HHsearch results for GI: 254780191 and protein with PDBid: 3dsq_A
>3dsq_A Pyrrolysyl-tRNA synthetase; homodimer, aminoacyl-tRNA synthetase, ligase; 2.10A {Desulfitobacterium hafniense} PDB: 2znj_A 2zni_A
Probab=93.15 E-value=0.19 Score=28.53 Aligned_cols=101 Identities=16% Similarity=0.250 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHHCCCEECCCCCCC----------CCCCCCHH--EEECCCCCCCCCC-----------CCCCCCCCCC
Q ss_conf 78999999999997898891166756----------67787100--2301434755400-----------5887999998
Q gi|254780191|r 4 VSSIRTTFLEFFQKNGHELLPSSSLI----------PCNDPTLM--FTNSGMVPFKNIF-----------TGQEKPVYQA 60 (898)
Q Consensus 4 ~~eiR~~fl~fF~~~~H~~~~s~slv----------p~~d~~ll--ft~Agm~~fk~~f-----------~G~~~p~~~r 60 (898)
.++|.+...+||.++|...|..-.++ |.++|--. |..-+-..++|.. .+..++| .|
T Consensus 73 ~~~l~~~ir~~~~~~Gf~eV~tP~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Lrp~~~p~~~~~~~~~~~~~~~p-~r 151 (288)
T 3dsq_A 73 LLELEEKLAKALHQQGFVQVVTPTIITKSALAKMTIGEDHPLFSQVFWLDGKKCLRPMLAPNLYTLWRELERLWDKP-IR 151 (288)
T ss_dssp HHHHHHHHHHHHHTTTCEECCCCSEEEHHHHHTTSSCC--CCTTTSCEEETTEEECSCSHHHHHHHHHHHTTTSCSC-EE
T ss_pred HHHHHHHHHHHHHHCCCEEEECCCEEEHHHHHCCCCCCCCCCCCCEEECCCCEECCCCCCHHHHHHHHHHHHCCCCC-EE
T ss_conf 99999999999998879899875265221553457654433022047637420134357717889999863014798-48
Q ss_pred CCCCCCCEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHCC-CC--HHHHHHHHHHHH
Q ss_conf 5111543224898786343464885001788854223147-53--788999899861
Q gi|254780191|r 61 VTTVQKCVRAGGKHNDLDNVGRTNRHHTFFEMLGNFSFGG-YF--KERAIQLAWDLL 114 (898)
Q Consensus 61 ~~~~QkCiR~ggkhnDld~VG~t~rH~TfFEMlGn~Sfgd-Yf--K~eai~~awe~l 114 (898)
+..+-+|.|. + ..| .+|.--|-|++=+.+|. .- -.+.+.++-++|
T Consensus 152 ~~~ig~vfR~-----E--~~~--~~h~~eFtQ~e~~~~~~~~~~~~~~l~~l~~~~l 199 (288)
T 3dsq_A 152 IFEIGTCYRK-----E--SQG--AQHLNEFTMLNLTELGTPLEERHQRLEDMARWVL 199 (288)
T ss_dssp EEEEEEEECS-----C--CSS--SCCCSEEEEEEEEEETCCGGGHHHHHHHHHHHHH
T ss_pred EEEECEEECC-----C--CCC--CCCCCCEEECCEEEECCCHHHHHHHHHHHHHHHH
T ss_conf 9996625556-----8--688--8867827773158986988999999999999999