HHsearch results for GI: 254780191 and protein with PDBid: 3dsq_A

>3dsq_A Pyrrolysyl-tRNA synthetase; homodimer, aminoacyl-tRNA synthetase, ligase; 2.10A {Desulfitobacterium hafniense} PDB: 2znj_A 2zni_A
Probab=93.15  E-value=0.19  Score=28.53  Aligned_cols=101  Identities=16%  Similarity=0.250  Sum_probs=54.5

Q ss_pred             HHHHHHHHHHHHHHCCCEECCCCCCC----------CCCCCCHH--EEECCCCCCCCCC-----------CCCCCCCCCC
Q ss_conf             78999999999997898891166756----------67787100--2301434755400-----------5887999998
Q gi|254780191|r    4 VSSIRTTFLEFFQKNGHELLPSSSLI----------PCNDPTLM--FTNSGMVPFKNIF-----------TGQEKPVYQA   60 (898)
Q Consensus         4 ~~eiR~~fl~fF~~~~H~~~~s~slv----------p~~d~~ll--ft~Agm~~fk~~f-----------~G~~~p~~~r   60 (898)
                      .++|.+...+||.++|...|..-.++          |.++|--.  |..-+-..++|..           .+..++| .|
T Consensus        73 ~~~l~~~ir~~~~~~Gf~eV~tP~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Lrp~~~p~~~~~~~~~~~~~~~p-~r  151 (288)
T 3dsq_A           73 LLELEEKLAKALHQQGFVQVVTPTIITKSALAKMTIGEDHPLFSQVFWLDGKKCLRPMLAPNLYTLWRELERLWDKP-IR  151 (288)
T ss_dssp             HHHHHHHHHHHHHTTTCEECCCCSEEEHHHHHTTSSCC--CCTTTSCEEETTEEECSCSHHHHHHHHHHHTTTSCSC-EE
T ss_pred             HHHHHHHHHHHHHHCCCEEEECCCEEEHHHHHCCCCCCCCCCCCCEEECCCCEECCCCCCHHHHHHHHHHHHCCCCC-EE
T ss_conf             99999999999998879899875265221553457654433022047637420134357717889999863014798-48


Q ss_pred             CCCCCCCEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHCC-CC--HHHHHHHHHHHH
Q ss_conf             5111543224898786343464885001788854223147-53--788999899861
Q gi|254780191|r   61 VTTVQKCVRAGGKHNDLDNVGRTNRHHTFFEMLGNFSFGG-YF--KERAIQLAWDLL  114 (898)
Q Consensus        61 ~~~~QkCiR~ggkhnDld~VG~t~rH~TfFEMlGn~Sfgd-Yf--K~eai~~awe~l  114 (898)
                      +..+-+|.|.     +  ..|  .+|.--|-|++=+.+|. .-  -.+.+.++-++|
T Consensus       152 ~~~ig~vfR~-----E--~~~--~~h~~eFtQ~e~~~~~~~~~~~~~~l~~l~~~~l  199 (288)
T 3dsq_A          152 IFEIGTCYRK-----E--SQG--AQHLNEFTMLNLTELGTPLEERHQRLEDMARWVL  199 (288)
T ss_dssp             EEEEEEEECS-----C--CSS--SCCCSEEEEEEEEEETCCGGGHHHHHHHHHHHHH
T ss_pred             EEEECEEECC-----C--CCC--CCCCCCEEECCEEEECCCHHHHHHHHHHHHHHHH
T ss_conf             9996625556-----8--688--8867827773158986988999999999999999