RPSBLAST alignment of GI: 254780191 and protein with PDBid: 1yfs
>1yfs_A Alanyl-tRNA synthetase; alpha-beta fold, helix-loop-helix motif, amino acid binding, ligase; 2.08A {Aquifex aeolicus} SCOP: a.203.1.1 d.104.1.1 PDB: 1yfr_A* 1riq_A 1yft_A 1ygb_A 3htz_A Length = 465
Score = 491 bits (1265), Expect = e-139
Identities = 213/468 (45%), Positives = 300/468 (64%), Gaps = 15/468 (3%)
Query: 1 MS-NVSSIRTTFLEFFQKNGHELLPSSSLIPCNDPTLMFTNSGMVPFKNIFTGQEKPVYQ 59
MS + IR FL FF+K GH + S+ L+P NDPTL+F N+GMVPFKN+F G EK Y+
Sbjct: 1 MSLSAHEIRELFLSFFEKKGHTRVKSAPLVPENDPTLLFVNAGMVPFKNVFLGLEKRPYK 60
Query: 60 AVTTVQKCVRAGGKHNDLDNVGRTNRHHTFFEMLGNFSFGGYFKERAIQLAWDLLTKEFD 119
T+ QKC+R GKHNDL+ VG T+RHHTFFEMLGNFSFG YFK+ AI+ AW+ +T+
Sbjct: 61 RATSCQKCLRVSGKHNDLEQVGYTSRHHTFFEMLGNFSFGDYFKKEAIEYAWEFVTEVLK 120
Query: 120 LDQRRLYITVYDEDEEAFKLWKKISGLSADKIIRITTNDNFWSMAETGPCGPCSEIFFDQ 179
L + +LY++VY +DEEA+++W + G+ +++I R+ DNFW M + GPCGP SEI+ D+
Sbjct: 121 LPKEKLYVSVYKDDEEAYRIWNEHIGIPSERIWRLGEEDNFWQMGDVGPCGPSSEIYVDR 180
Query: 180 GECIPGGLPGSSEEGERYIEIWNLVFMQFEQQNKQERFILPKMSIDTGMGLERMATVLQE 239
GE G ERY+EIWNLVFMQ+ + LP +IDTGMGLER+A+VLQ
Sbjct: 181 GEEYEG--------DERYLEIWNLVFMQYNRDENGVLTPLPHPNIDTGMGLERIASVLQG 232
Query: 240 KTNNYDIDLFKHLIQASEQVTGMKYEGNNI--VNHRVIVDHLRSSSFLIADGILPANEGR 297
K +N++ID+ LIQ E+V+G KY V RVI DHLR+ +F I+DG++P+NEGR
Sbjct: 233 KNSNFEIDIIFPLIQFGEEVSGKKYGEKFETDVALRVIADHLRAITFAISDGVIPSNEGR 292
Query: 298 GYVLRRIMRRAMCYARLLGYTEPLMMHLLPALCTEMGSAYPELIQAKLLIEETLRSEDER 357
GYV+RRI+RRAM + LG P + + + M YPEL ++ ++ ++ E++R
Sbjct: 293 GYVIRRILRRAMRFGYKLGIENPFLYKGVDLVVDIMKEPYPELELSREFVKGIVKGEEKR 352
Query: 358 FGKTLDRGLVLLDGVLSHLGKD--EILNGDVAFKLYDTHGLPLDIMQDILCARGLAGIDI 415
F KTL G+ + V+ ++ + L+G F YDT+G P+D++ +I +GL GID+
Sbjct: 353 FIKTLKAGMEYIQEVIQKALEEGRKTLSGKEVFTAYDTYGFPVDLIDEIAREKGL-GIDL 411
Query: 416 ISFNQALEEQRSRARAHSLGLGSGTTEKIWFSLKEKYGATQFIGYDLL 463
F LEEQR RAR H + + ++ LKE + F+G L
Sbjct: 412 EGFQCELEEQRERARKHFKV-EAKKVKPVYSHLKELGKTSAFVGAAAL 458