RPSBLAST alignment for GI: 254780193 and conserved domain: TIGR00960

>gnl|CDD|130034 TIGR00960, 3a0501s02, Type II (General) Secretory Pathway (IISP) Family protein. Length = 216
 Score =  108 bits (271), Expect = 4e-24
 Identities = 75/213 (35%), Positives = 105/213 (49%), Gaps = 21/213 (9%)

Query: 288 VSFRSVSFVYPGKSKRSILKNVNFTVQPGETIALVGDSGAGKTSIFSLILRFYDPCSGSV 347
           + F  VS  YPG   +  L N+NF +  GE + LVG SGAGK++   LIL    P  G +
Sbjct: 2   IRFEQVSKAYPG-GHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKI 60

Query: 348 EIEGIDLRLLSLEEI---RRFIAWVPQ-HPIMIAASVYDNIA-----IGCPHATRKEIQN 398
              G DL  L   EI   RR I  V Q H ++   +VYDN+A     IG P    ++   
Sbjct: 61  RFNGQDLTRLRGREIPFLRRHIGMVFQDHRLLSDRTVYDNVAFPLRIIGVP---PRDANE 117

Query: 399 AAMLAQAHEFIGCLENGYDTILGDGAVHLSTGQIQRIAIARAILKDSPILLLDEMGSALD 458
               A   E +G     +        + LS G+ QR+AIARAI+   P+LL DE    LD
Sbjct: 118 RVSAAL--EKVGLEGKAHAL-----PMQLSGGEQQRVAIARAIVHKPPLLLADEPTGNLD 170

Query: 459 IENEQKIWKVLRE-QRRGRTTIFASHRLSAIQD 490
            E  + I ++  E  RRG T + A+H ++ ++ 
Sbjct: 171 PELSRDIMRLFEEFNRRGTTVLVATHDINLVET 203