RPSBLAST alignment for GI: 254780193 and conserved domain: TIGR02203

>gnl|CDD|131258 TIGR02203, MsbA_lipidA, lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes. Length = 571
 Score =  272 bits (697), Expect = 2e-73
 Identities = 158/533 (29%), Positives = 269/533 (50%), Gaps = 20/533 (3%)

Query: 8   KRDVSLYLWGMFVLLLLAV----ASSLRYYCATMLGERMILFMQRDVIAKIIKLSPSFFN 63
            RD S+  W   V++ LAV     S +  Y  + +  +++  ++  +  K++ L  SFF+
Sbjct: 47  GRDRSVLWWVPLVVIGLAVLRGICSFVSTYLLSWVSNKVVRDIRVRMFEKLLGLPVSFFD 106

Query: 64  SRGHGEIFSILVKDTERIKAIIGIGMSIVLRSLLMGFGAMCMMFVISIKLSLIVVSIVTL 123
            +  G + S +  D+E++ +       +++R  L   G   ++   S +L+LIVV ++ +
Sbjct: 107 RQPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTLIVVVMLPV 166

Query: 124 FLMVMIKFSR------KKTNTLYADEKKLLNIFSDMIKSVMVLQSFNAGKEAIRLYDIQS 177
             ++M + S+      K+          +  +  + ++   V++ F       R +D  S
Sbjct: 167 LSILMRRVSKRLRRISKEIQNSMGQ---VTTVAEETLQGYRVVKLFGGQAYETRRFDAVS 223

Query: 178 QKTYKGFLRSALIRTCIACFVIFFVSCGIFIVFLIGAHYVATAEMPRGKLAEFVVYAFIF 237
            +  +  ++     +  +       S  + +V  I         +  G    F+      
Sbjct: 224 NRNRRLAMKMTSAGSISSPITQLIASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIAL 283

Query: 238 FASIRSCLGFIGGISQAIASLRRLRELIVCKLDISSPISSRTFPSP-VLGSVSFRSVSFV 296
              ++S       + + +A+   L  L    LD      + T       G V FR+V+F 
Sbjct: 284 IRPLKSLTNVNAPMQRGLAAAESLFTL----LDSPPEKDTGTRAIERARGDVEFRNVTFR 339

Query: 297 YPGKSKRSILKNVNFTVQPGETIALVGDSGAGKTSIFSLILRFYDPCSGSVEIEGIDLRL 356
           YPG+  R  L +++  ++PGET+ALVG SG+GK+++ +LI RFY+P SG + ++G DL  
Sbjct: 340 YPGRD-RPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHDLAD 398

Query: 357 LSLEEIRRFIAWVPQHPIMIAASVYDNIAIGCP-HATRKEIQNAAMLAQAHEFIGCLENG 415
            +L  +RR +A V Q  ++   ++ +NIA G    A R EI+ A   A A +F+  L  G
Sbjct: 399 YTLASLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLG 458

Query: 416 YDTILGDGAVHLSTGQIQRIAIARAILKDSPILLLDEMGSALDIENEQKIWKVLREQRRG 475
            DT +G+  V LS GQ QR+AIARA+LKD+PIL+LDE  SALD E+E+ +   L    +G
Sbjct: 459 LDTPIGENGVLLSGGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLMQG 518

Query: 476 RTTIFASHRLSAIQDADMVFVLHDQVIVEKGVHEELLKKSGFYAHYHILGMSQ 528
           RTT+  +HRLS I+ AD + V+ D  IVE+G H ELL ++G YA  H +   +
Sbjct: 519 RTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHNELLARNGLYAQLHNMQFRE 571