RPSBLAST alignment for GI: 254780193 and conserved domain: TIGR00956

 Score = 45.5 bits (108), Expect = 4e-05
 Identities = 55/212 (25%), Positives = 90/212 (42%), Gaps = 42/212 (19%)

Query: 300 KSKRSILKNVNFTVQPGETIALVGDSGAGKTSIFSLILRFYDPCSGSVEIEGIDLRLLSL 359
           K KR IL NV+  V+PG   AL+G SGAGKT++ +++    +  +  V   G   RL++ 
Sbjct: 773 KEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVL---AERVTTGVITGGD--RLVNG 827

Query: 360 EEI----RRFIAWVPQHPIMIAASVYDNIAIGCPHATRKEIQNAAMLAQAHEFIGCLENG 415
             +    +R I +V Q  + +  S             R+ ++ +A L Q        +  
Sbjct: 828 RPLDSSFQRSIGYVQQQDLHLPTS-----------TVRESLRFSAYLRQPKSVSKSEKME 876

Query: 416 Y--------------DTILGDGAVHLSTGQIQRIAIA-RAILKDSPILLLDEMGSALDIE 460
           Y              D ++G     L+  Q +R+ I    + K   +L LDE  S LD  
Sbjct: 877 YVEEVIKLLEMESYADAVVGVPGEGLNVEQRKRLTIGVELVAKPKLLLFLDEPTSGLD-- 934

Query: 461 NEQKIWKVLREQRR----GRTTIFASHRLSAI 488
             Q  W + +  R+    G+  +   H+ SAI
Sbjct: 935 -SQTAWSICKLMRKLADHGQAILCTIHQPSAI 965