RPSBLAST alignment for GI: 254780193 and conserved domain: TIGR03375

>gnl|CDD|163239 TIGR03375, type_I_sec_LssB, type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export. Length = 694
 Score =  218 bits (557), Expect = 3e-57
 Identities = 101/264 (38%), Positives = 159/264 (60%), Gaps = 4/264 (1%)

Query: 252 SQAIASLRRLRELIVCKLDISSPISSRTFPSPVL-GSVSFRSVSFVYPGKSKRSILKNVN 310
            QA  +L+ L EL+  +L +  P  +R    P L G + FR+VSF YPG  +   L NV+
Sbjct: 429 QQAKTALQSLDELM--QLPVERPEGTRFLHRPRLQGEIEFRNVSFAYPG-QETPALDNVS 485

Query: 311 FTVQPGETIALVGDSGAGKTSIFSLILRFYDPCSGSVEIEGIDLRLLSLEEIRRFIAWVP 370
            T++PGE +A++G  G+GK+++  L+L  Y P  GSV ++G+D+R +   ++RR I +VP
Sbjct: 486 LTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDGVDIRQIDPADLRRNIGYVP 545

Query: 371 QHPIMIAASVYDNIAIGCPHATRKEIQNAAMLAQAHEFIGCLENGYDTILGDGAVHLSTG 430
           Q P +   ++ DNIA+G P+A  +EI  AA LA   EF+    +G D  +G+    LS G
Sbjct: 546 QDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGG 605

Query: 431 QIQRIAIARAILKDSPILLLDEMGSALDIENEQKIWKVLREQRRGRTTIFASHRLSAIQD 490
           Q Q +A+ARA+L+D PILLLDE  SA+D  +E++    L+    G+T +  +HR S +  
Sbjct: 606 QRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDL 665

Query: 491 ADMVFVLHDQVIVEKGVHEELLKK 514
            D + V+ +  IV  G  +++L+ 
Sbjct: 666 VDRIIVMDNGRIVADGPKDQVLEA 689