RPSBLAST alignment for GI: 254780193 and conserved domain: TIGR03719
>gnl|CDD|163431 TIGR03719, ABC_ABC_ChvD, ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown. Length = 552
Score = 44.9 bits (107), Expect = 6e-05
Identities = 53/203 (26%), Positives = 81/203 (39%), Gaps = 52/203 (25%)
Query: 293 VSFVYPGKSKRSILKNVNFTVQPGETIALVGDSGAGKTSIFSLILRFYDPCSGSVEIEGI 352
VS V P K + ILK+++ + PG I ++G +GAGK S +LR + G+
Sbjct: 10 VSKVVPPK--KEILKDISLSFFPGAKIGVLGLNGAGK----STLLRI---------MAGV 54
Query: 353 DLRLLSLEEIRRF----IAWVPQHPIM-IAASVYDNIAIGCPHATRK------------- 394
D E R + ++PQ P + +V +N+ G
Sbjct: 55 DKEFNG--EARPAPGIKVGYLPQEPQLDPTKTVRENVEEGVAEIKDALDRFNEISAKFAE 112
Query: 395 -------------EIQNAAMLAQAHEFIGCLENGYDTIL---GDGAV-HLSTGQIQRIAI 437
E+Q A A + LE D + D V LS G+ +R+A+
Sbjct: 113 PDADMDALLAEQAELQEIIDAADAWDLDRKLEIAMDALRCPPWDADVTKLSGGERRRVAL 172
Query: 438 ARAILKDSPILLLDEMGSALDIE 460
R +L +LLLDE + LD E
Sbjct: 173 CRLLLSKPDMLLLDEPTNHLDAE 195