RPSBLAST alignment for GI: 254780193 and conserved domain: COG4988
>gnl|CDD|34593 COG4988, CydD, ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]. Length = 559
Score = 245 bits (626), Expect = 3e-65
Identities = 142/531 (26%), Positives = 260/531 (48%), Gaps = 18/531 (3%)
Query: 2 TSVFLDKRDVSLYLWGMFVLLLLAVASSLRYYCATM---LGERMILFMQRDVIAKIIKLS 58
T + + SL + +L+ L + + L + + ++ +++ V+ K+ KL
Sbjct: 28 TKLIEGQLFQSLLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDKLAKLG 87
Query: 59 PSFFNSRGHGEIFSILVKDTERIKAIIGIGMSIVLRSLLMGFGAMCMMFVISIKLSLIVV 118
P+F + G ++ ++ E+++ + + S ++ + +F + +LI++
Sbjct: 88 PAFIAQKPAGSAATLALEGIEQLEPYYARYLPQMFLSAIVPLLILIAIFFFNWAAALILL 147
Query: 119 ---SIVTLFLMVMIKFSRKKTNTLYADEKKLLNIFSDMIKSVMVLQSFNAGK-EAIRLYD 174
++ LF++++ ++ + ++ +L F D ++ + L++F + R+
Sbjct: 148 ITAPLIPLFMILVGLAAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTEATEERIRK 207
Query: 175 IQSQ--KTYKGFLRSALIRTCIACFVI-FFVSCGIFIV-FLIGAHYVATAEMPRGKLAEF 230
K LR A + + V+ FF I +V IG + ++
Sbjct: 208 DSEDFRKATMSVLRIAFLSS----AVLEFFAYLSIALVAVYIGFRLLGEGDLTLFAGLFV 263
Query: 231 VVYAFIFFASIRSCLGFIGGISQAIASLRRLRELIVCKLDISSPISSRTFPSPVLGSVSF 290
++ A FF +R F + A+ +L L+ + + +S
Sbjct: 264 LILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEKAEVANEPPIEISL 323
Query: 291 RSVSFVYPGKSKRSILKNVNFTVQPGETIALVGDSGAGKTSIFSLILRFYDPCSGSVEIE 350
++SF YP L ++N T++ G+ ALVG SGAGK+++ +L+L F P G + +
Sbjct: 324 ENLSFRYPDGKPA--LSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVN 381
Query: 351 GIDLRLLSLEEIRRFIAWVPQHPIMIAASVYDNIAIGCPHATRKEIQNAAMLAQAHEFIG 410
GIDLR LS E R+ I+WV Q+P + A ++ +NI + P A+ +EI A A EF+
Sbjct: 382 GIDLRDLSPEAWRKQISWVSQNPYLFAGTIRENILLARPDASDEEIIAALDQAGLLEFVP 441
Query: 411 CLENGYDTILGDGAVHLSTGQIQRIAIARAILKDSPILLLDEMGSALDIENEQKIWKVLR 470
+G DT++G+G LS GQ QR+A+ARA+L + +LLLDE + LD E EQ I + L+
Sbjct: 442 -KPDGLDTVIGEGGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQ 500
Query: 471 EQRRGRTTIFASHRLSAIQDADMVFVLHDQVIVEKGVHEELLKKSGFYAHY 521
E + +T + +HRL DAD + VL + +VE+G HEEL +K G YA+
Sbjct: 501 ELAKQKTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELSEKQGLYANL 551