RPSBLAST alignment for GI: 254780193 and conserved domain: cd03223
>gnl|CDD|72982 cd03223, ABCD_peroxisomal_ALDP, Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asymptomatic).. Length = 166
Score = 76.7 bits (189), Expect = 1e-14
Identities = 51/212 (24%), Positives = 91/212 (42%), Gaps = 50/212 (23%)
Query: 288 VSFRSVSFVYPGKSKRSILKNVNFTVQPGETIALVGDSGAGKTSIFSLILRFYDPCSGSV 347
+ ++S P R +LK+++F ++PG+ + + G SG GK+S+F + + SG +
Sbjct: 1 IELENLSLATP--DGRVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRI 58
Query: 348 EIEGIDLRLLSLEEIRRFIAWVPQHPIMIAASVYDNIAIGCPHATRKEIQNAAMLAQAHE 407
+ + ++PQ P + ++ + + P
Sbjct: 59 GMPE-----------GEDLLFLPQRPYLPLGTLREQLIY--P------------------ 87
Query: 408 FIGCLENGYDTILGDGAVHLSTGQIQRIAIARAILKDSPILLLDEMGSALDIENEQKIWK 467
+D +L S G+ QR+A AR +L + LDE SALD E+E ++++
Sbjct: 88 --------WDDVL-------SGGEQQRLAFARLLLHKPKFVFLDEATSALDEESEDRLYQ 132
Query: 468 VLREQRRGRTTIFASHRLSAIQDADMVFVLHD 499
+L+E G T I HR S + D V L
Sbjct: 133 LLKE--LGITVISVGHRPSLWKFHDRVLDLDG 162