RPSBLAST alignment for GI: 254780193 and conserved domain: cd03240

>gnl|CDD|72999 cd03240, ABC_Rad50, The catalytic domains of Rad50 are similar to the ATP-binding cassette of ABC transporters, but are not associated with membrane-spanning domains. The conserved ATP-binding motifs common to Rad50 and the ABC transporter family include the Walker A and Walker B motifs, the Q loop, a histidine residue in the switch region, a D-loop, and a conserved LSGG sequence. This conserved sequence, LSGG, is the most specific and characteristic motif of this family and is thus known as the ABC signature sequence.. Length = 204
 Score = 39.8 bits (93), Expect = 0.002
 Identities = 44/202 (21%), Positives = 72/202 (35%), Gaps = 27/202 (13%)

Query: 303 RSILKNVNFTVQPGETIALVGDSGAGKTSIFSLILRFYDPCSGSVEIEGIDLRLLSLEEI 362
           RS  +          T+ +VG +GAGKT+I                IE +   L      
Sbjct: 10  RSFHERSEIEFFSPLTL-IVGQNGAGKTTI----------------IEALKYALTGELPP 52

Query: 363 RRFIAWVPQHPIMIAASVYDNIAIGCPHATRKEIQNAAMLAQAHEFIGCLENGYDTILGD 422
                      I         + +   +A  K+      LA     I C +   +  L D
Sbjct: 53  NSKGGAHDPKLIREGEVRAQ-VKLAFENANGKKYTITRSLAILENVIFCHQGESNWPLLD 111

Query: 423 GAVHLSTGQ------IQRIAIARAILKDSPILLLDEMGSALDIEN-EQKIWKVLREQRR- 474
                S G+      I R+A+A     +  IL LDE  + LD EN E+ + +++ E++  
Sbjct: 112 MRGRCSGGEKVLASLIIRLALAETFGSNCGILALDEPTTNLDEENIEESLAEIIEERKSQ 171

Query: 475 -GRTTIFASHRLSAIQDADMVF 495
                I  +H    +  AD ++
Sbjct: 172 KNFQLIVITHDEELVDAADHIY 193