RPSBLAST alignment for GI: 254780193 and conserved domain: cd03247

>gnl|CDD|73006 cd03247, ABCC_cytochrome_bd, The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.. Length = 178
 Score =  130 bits (329), Expect = 8e-31
 Identities = 56/219 (25%), Positives = 108/219 (49%), Gaps = 41/219 (18%)

Query: 288 VSFRSVSFVYPGKSKRSILKNVNFTVQPGETIALVGDSGAGKTSIFSLILRFYDPCSGSV 347
           +S  +VSF YP + ++ +LKN++  ++ GE IAL+G SG+GK+++  L+     P  G +
Sbjct: 1   LSINNVSFSYPEQEQQ-VLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEI 59

Query: 348 EIEGIDLRLLSLEEIRRFIAWVPQHPIMIAASVYDNIAIGCPHATRKEIQNAAMLAQAHE 407
            ++G+ +  L  + +   I+ + Q P +   ++ +N+                       
Sbjct: 60  TLDGVPVSDLE-KALSSLISVLNQRPYLFDTTLRNNLGR--------------------- 97

Query: 408 FIGCLENGYDTILGDGAVHLSTGQIQRIAIARAILKDSPILLLDEMGSALDIENEQKIWK 467
                               S G+ QR+A+AR +L+D+PI+LLDE    LD   E+++  
Sbjct: 98  ------------------RFSGGERQRLALARILLQDAPIVLLDEPTVGLDPITERQLLS 139

Query: 468 VLREQRRGRTTIFASHRLSAIQDADMVFVLHDQVIVEKG 506
           ++ E  + +T I+ +H L+ I+  D +  L +  I+ +G
Sbjct: 140 LIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178