RPSBLAST alignment for GI: 254780193 and conserved domain: cd03294
>gnl|CDD|73053 cd03294, ABC_Pro_Gly_Bertaine, This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 269
Score = 111 bits (279), Expect = 5e-25
Identities = 79/247 (31%), Positives = 125/247 (50%), Gaps = 24/247 (9%)
Query: 284 VLGSVSFRSVSFVYPGKSKRSILK---------NVNFTVQPGETIALVGDSGAGKTSIFS 334
+ G ++ + GKSK ILK +V+ V+ GE ++G SG+GK+++
Sbjct: 9 IFGKNPQKAFKLLAKGKSKEEILKKTGQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLR 68
Query: 335 LILRFYDPCSGSVEIEGIDLRLLS---LEEIRR-FIAWVPQH-PIMIAASVYDNIAIGCP 389
I R +P SG V I+G D+ +S L E+RR I+ V Q ++ +V +N+A G
Sbjct: 69 CINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKKISMVFQSFALLPHRTVLENVAFGLE 128
Query: 390 HATRKEIQNAAMLAQAHEFIGCLENGYDTILGDGAVHLSTGQIQRIAIARAILKDSPILL 449
+ A+A E +G LE + LS G QR+ +ARA+ D ILL
Sbjct: 129 VQGVPRAEREERAAEALELVG-LEGWEHKYPDE----LSGGMQQRVGLARALAVDPDILL 183
Query: 450 LDEMGSALD--IENEQKIWKVLREQR-RGRTTIFASHRLS-AIQDADMVFVLHDQVIVEK 505
+DE SALD I E + ++LR Q +T +F +H L A++ D + ++ D +V+
Sbjct: 184 MDEAFSALDPLIRREMQD-ELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQV 242
Query: 506 GVHEELL 512
G EE+L
Sbjct: 243 GTPEEIL 249