HHsearch alignment of GI: 254780194 and MMDB domain: 3bbo_1_

>3bbo_1 (1:) Ribosomal protein L31; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Arabidopsis thaliana}
Probab=99.86  E-value=1.7e-25  Score=171.97  Aligned_cols=68  Identities=32%  Similarity=0.334  Sum_probs=60.8

Q ss_pred             CCCCCCCCCEEEEEE-ECCCCEEEEEEEECCCCCEEEEEECCCCCCCEECCCEEEEEC-CCHHHHHHHHHHCCCC
Q ss_conf             988788984079999-879997998876547688699985487789711681789721-3648999977602678
Q gi|254780194|r    1 MKKNIHPETHLITVV-MTDGTQYQTRSTWKEEGAVMKLDIDPLSHFAWIGGRQKITDR-GGQVSRFKKRFAGLSI   73 (74)
Q Consensus         1 MKk~IHP~y~~v~v~-~t~g~~~~t~sT~g~~~~~~~vdi~s~~HP~fytgkq~~~dt-~GrveKF~kkfg~~~~   73 (74)
                      ||++|||+|++++++ |+||++|.++||.    |+|+|||||.||| ||||+|+.+++ +||||||++|||++..
T Consensus        49 mKk~IHP~y~~~~~v~~s~g~~f~~~ST~----~~i~idv~s~~HP-fytG~~~~~~~~aGRv~kF~kRf~~~~~  118 (144)
T 3bbo_1           49 RKKELHPEFHEDAKVYCNGELVMTTGGTK----KEYVVDVWSGNHP-FYLGNRSALMVDADQVEKFRKRFAGLSE  118 (144)
T ss_dssp             -CTTTCCCCCHHHHHCSSSCTTTSCSSCS----CSSSCCSSCCCCC-SSSSSSSCCCCCCCCCCCSSCCCCCCSS
T ss_pred             CCCCCCCCCCCCEEEECCCCCEEEEEECC----CCEEEEECCCCCC-EEECCEEEEECCCCHHHHHHHHHCCCCH
T ss_conf             45777989825539987999789972457----7368877389875-0767704885355339999988615001