HHsearch alignment for GI: 254780195 and conserved domain: KOG1224
>KOG1224 consensus.
Probab=98.85 E-value=3.4e-08 Score=79.74 Aligned_cols=198 Identities=23% Similarity=0.345 Sum_probs=105.6
Q ss_pred CCEEEEEEHHHCCCCHHHH-HHHHHHHHHH-HHHCCCCCEEEECCCCCCCCCHHHHHC---CCCEEEECCCCCCC-CCHH
Q ss_conf 4379999520014813468-8888888887-873672416772256567234456621---69839973777865-5016
Q gi|254780195|r 290 NEVKVAIVGKYIHLKDAYR-SLIEALRHSG-VSNYTKVQLSWIDAETLEKEDPVKHFY---GVHGILVPGGFGKR-GSEG 363 (544)
Q Consensus 290 ~~V~IaiVGKY~~l~DaY~-Si~EAL~hA~-~~~~~kv~i~wIdse~le~~~~~~~L~---~~dGIlVPGGFG~R-GieG 363 (544)
T Consensus 13 ~rl~~LlID~Y----DSyTfNiy~ll~~~~~vp~V~~vh~~~~~~d~------~~~l~q~~~FDaIVVgPGPG~P~~a~d 82 (767)
T KOG1224 13 PRLRTLLIDNY----DSYTFNIYQLLSTINGVPPVVIVHDEWTWEDA------YHYLYQDVAFDAIVVGPGPGSPMCAAD 82 (767)
T ss_pred HHEEEEEEECC----CCHHHHHHHHHHHHCCCCCEEEEECCCCCHHH------HHHHHHCCCCCEEEECCCCCCCCCHHH
T ss_conf 12028887124----54121399999874179967998343237789------998864002244896689979874788
Q ss_pred H-HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEE
Q ss_conf 8-889988740476322355769999999987516889997000356666412115011234653001565546740231
Q gi|254780195|r 364 K-IAAIKFARENKIPFLGICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRL 442 (544)
Q Consensus 364 k-I~Ai~yARen~iP~LGIClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRL 442 (544)
T Consensus 83 ~gI~~rl~~~~~~iPilGICLGfQal~l--------~hGA~v~~~n~p~HGrvs-------------------------- 128 (767)
T KOG1224 83 IGICLRLLLECRDIPILGICLGFQALGL--------VHGAHVVHANEPVHGRVS-------------------------- 128 (767)
T ss_pred HHHHHHHHHHCCCCCEEEEEHHHHHHHH--------HCCCCEECCCCCCCCEEE--------------------------
T ss_conf 7899999986578864654321476765--------316611037876432466--------------------------
Q ss_pred CCEEEEECCCCHHHHH---HCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCC
Q ss_conf 6525785587066886---3798476602523332788998999789599998699986899983899849997248773
Q gi|254780195|r 443 GAYDVSLKEETLISRI---YGLDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPEL 519 (544)
Q Consensus 443 G~~~~~l~~~S~~~~i---Yg~~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf 519 (544)
T Consensus 129 ---~i~~~~~~~f~gi~sg~~~~fK~~RY-HSL~in~~pid~l~---il~t~~ddng~ilMsi~~~~fPhf-G~qyHPES 200 (767)
T KOG1224 129 ---GIEHDGNILFSGIPSGRNSDFKVVRY-HSLIINSLPIDLLP---ILWTIYDDNGHILMSIMHSSFPHF-GLQYHPES 200 (767)
T ss_pred ---EEEECCCEEECCCCCCCCCCCEEEEE-EEEEECCCCHHHHC---CEEEEECCCCEEEEEEECCCCCCC-CEEECHHH
T ss_conf ---67726847871577788664404776-77872577611212---013760688628987531578853-42337077
Q ss_pred CCCCCCCCHHHHHHHHHHHHH
Q ss_conf 278769884158999999987
Q gi|254780195|r 520 KSRPLDPHPLFVSFIQATVLY 540 (544)
Q Consensus 520 ~Srp~~phPLF~~fi~Aal~~ 540 (544)
T Consensus 201 ~~s-~~g~~lfkNFl~lt~~~ 220 (767)
T KOG1224 201 IAS-TYGSQLFKNFLDLTVNY 220 (767)
T ss_pred HHH-HHHHHHHHHHHHHHCCC
T ss_conf 531-34579998777763367