HHsearch alignment for GI: 254780195 and conserved domain: PRK13181
>PRK13181 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional.
Probab=99.49 E-value=3.3e-14 Score=123.03 Aligned_cols=179 Identities=27% Similarity=0.338 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECC-C-CCC--CCC--HHHHHHHHHHHCCCCCHHHH
Q ss_conf 88888888887873672416772256567234456621698399737-7-786--550--16888998874047632235
Q gi|254780195|r 308 RSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPG-G-FGK--RGS--EGKIAAIKFARENKIPFLGI 381 (544)
Q Consensus 308 ~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPG-G-FG~--RGi--eGkI~Ai~yARen~iP~LGI 381 (544)
T Consensus 13 ~si~r~l~~lg~----~~~i--~-------~~-~~~l~~~d~lIlPGvG~~~~~~~~l~~~~~~~~i~~~~~~~~PiLGI 78 (199)
T PRK13181 13 RSVANALKRLGV----EAVV--S-------SD-PEEIEGADKVILPGVGAFGQAMAALRESGLDEAIKEHVEKKQPVLGI 78 (199)
T ss_pred HHHHHHHHHCCC----EEEE--E-------CC-HHHHHHHHCEECCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCEEEE
T ss_conf 999999998698----0999--7-------99-99974211004579865330256665638679999999769988998
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHHHH-C
Q ss_conf 576999999998751688999700035666641211501123465300156554674023165257855870668863-7
Q gi|254780195|r 382 CFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIY-G 460 (544)
Q Consensus 382 ClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~iY-g 460 (544)
T Consensus 79 ClGmQlL~~------------~~~e-g~~--~GLgl~~g~v~~~~-~~~~~~phiG------w~~i~~~~~~~lf~~~~~ 136 (199)
T PRK13181 79 CLGMQLLCE------------SSEE-GNV--KGLGLIPGDVKRFR-SGKDKVPQMG------WNSVKPLKESPLFKGIEE 136 (199)
T ss_pred EEEEEEEEE------------CCCC-CCC--CCCCEECCEEEECC-CCCCCCCCCC------CEEEEEECCCHHHCCCCC
T ss_conf 042676541------------0003-654--66666212899827-7655557777------458876216844537655
Q ss_pred CCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHH
Q ss_conf 984766025233327889989997895999986999868999838998499972487732787698841589999
Q gi|254780195|r 461 LDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSFIQ 535 (544)
Q Consensus 461 ~~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF~~fi~ 535 (544)
T Consensus 137 ~~~~--yf~Hs~~v~~~------~~~~~~a~~~~g~~~~~~v~~~n---i~GvQFHPE-~s~-~~G~~il~nFl~ 198 (199)
T PRK13181 137 NSRF--YFVHSYYVPPE------DPEDVLATTNYGVPFCSAVEKDN---IYAVQFHPE-KSG-KAGLKLLKNFAE 198 (199)
T ss_pred CCEE--EEEEEEEEECC------CCCCEEEEECCCCEEEEEEECCC---EEEEECCCC-CCC-HHHHHHHHHHHC
T ss_conf 5604--88850378617------87632799638984999998999---999908978-178-609999999866