HHsearch alignment for GI: 254780197 and conserved domain: cd04723

>cd04723 HisA_HisF Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase (HisA) and the cyclase subunit of imidazoleglycerol phosphate synthase (HisF). The ProFAR isomerase catalyzes the fourth step in histidine biosynthesis, an isomerisation of the aminoaldose moiety of ProFAR to the aminoketose of PRFAR (N-(5'-phospho-D-1'-ribulosylformimino)-5-amino-1-(5''-phospho-ribosyl)-4-imidazolecarboxamide). In bacteria and archaea, ProFAR isomerase is encoded by the HisA gene. The Imidazole glycerol phosphate synthase (IGPS) catalyzes the fifth step of histidine biosynthesis, the formation of the imidazole ring. IGPS converts N1-(5'-phosphoribulosyl)-formimino-5-aminoimidazole-4-carboxamide ribonucleotide (PRFAR) to imidazole glycerol phosphate (ImGP) and 5'-(5-aminoimidazole-4-carboxamide) ribonucleotide (AICAR). This conversion involves two tightly coupled reactions in distinct active sites of IGPS. The two catalytic domains can be fused, like in fungi and pl
Probab=90.62  E-value=0.46  Score=27.41  Aligned_cols=137  Identities=18%  Similarity=0.141  Sum_probs=72.3

Q ss_pred             CCCCCCCCHHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCC-CCCCHHHH
Q ss_conf             34332120677754073100104200022135799999999999983347479981655203334980001-11002221
Q gi|254780197|r   75 GPYTGDISANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEV-LQKQLDCS  153 (264)
Q Consensus        75 GA~TGeiSa~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~-l~~Ql~~~  153 (264)
T Consensus        85 GGIrs~~~~~~~l~~Gadkvvigs-~---~~-~~-~~~~~~~~~--~g~~~ivvslD----~k~-~~~~~~~~~~~~~~~  151 (233)
T cd04723          85 GGIRSLENAQEWLKRGASRVIVGT-E---TL-PS-DDDEDRLAA--LGEQRLVLSLD----FRG-GQLLKPTDFIGPEEL  151 (233)
T ss_pred             CCCCCHHHHHHHHHCCCCEEECCC-H---HC-CC-HHHHHHHHH--HCCCCEEEEEE----EEC-CCCCCCCCCCCHHHH
T ss_conf             022769999999860720152451-0---04-99-899999999--78999899999----989-978724643489999


Q ss_pred             HHCCCC-CCCCEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCC-CHHHHHHHHCCCCCCEE
Q ss_conf             000000-1341132051353045576431124554467999999633224164308862778-98789999668989688
Q gi|254780197|r  154 LPSEFK-SSVPVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSV-DVANAEDFSLIENIDGL  231 (264)
Q Consensus       154 l~~~~~-~~~~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV-~~~N~~~l~~~~~iDG~  231 (264)
T Consensus       152 ~~~~~~~~~eii--~t~Id~dGt~~G~d~~l~~~i~~~-------------~~~pvi~sGGv~s~~di~~l~~-~g~~gv  215 (233)
T cd04723         152 LRRLAKWPEELI--VLDIDRVGSGQGPDLELLERLAAR-------------ADIPVIAAGGVRSVEDLELLKK-LGASGA  215 (233)
T ss_pred             HHHHHHHCCEEE--EEEECCCCCCCCCCHHHHHHHHHH-------------CCCCEEEECCCCCHHHHHHHHH-CCCCEE
T ss_conf             999996589599--986434465677799999999986-------------8998999889999999999997-899899


Q ss_pred             EECHHHCCH
Q ss_conf             974343588
Q gi|254780197|r  232 LVGGASLQH  240 (264)
Q Consensus       232 LVG~ASl~~  240 (264)
T Consensus       216 ivg~alh~g  224 (233)
T cd04723         216 LVASALHDG  224 (233)
T ss_pred             EEEHHHHCC
T ss_conf             986397789