HHsearch results for GI: 254780197 and protein with PDBid: 1mo0_A
>1mo0_A TIM, triosephosphate isomerase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; 1.70A {Caenorhabditis elegans} SCOP: c.1.1.1
Probab=100.00 E-value=0 Score=629.89 Aligned_cols=251 Identities=35% Similarity=0.596 Sum_probs=235.1
Q ss_pred CCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCC
Q ss_conf 98885069986465689999999999995222345771199968965599999973257631022201222333433212
Q gi|254780197|r 2 KVGIRPLVVGNWKMHGLRLSLERIQKIVEGIRRNSCCIDVAICPPATLIYESSRLCKTSSVIIGAQDCHIAEYGPYTGDI 81 (264)
Q Consensus 2 ~~~mK~iIigNWKMN~~~~~~~~~~~~~~~~~~~~~~veivi~Pp~~~L~~~~~~~~~s~I~igAQnv~~~~~GA~TGei 81 (264)
.|+||+||+||||||++..++..+.+.+..... ..++++++|||++||..+.+.++ ++|.+|||||++++.|||||||
T Consensus 20 ~m~rK~iIagNWKMN~~~~~~~~~~~~l~~~~~-~~~~~ivI~Pp~~~L~~v~~~l~-s~I~iGAQnvs~~~~GA~TGev 97 (275)
T 1mo0_A 20 GLTRKFFVGGNWKMNGDYASVDGIVTFLNASAD-NSSVDVVVAPPAPYLAYAKSKLK-AGVLVAAQNCYKVPKGAFTGEI 97 (275)
T ss_dssp CSCSCEEEEEECCBCCCHHHHHHHHHHHHHSCC-CTTEEEEEECCGGGHHHHHHHSC-TTEEEEESCCCSSSSBSCTTCC
T ss_pred CCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCC-CCCCEEEEECCHHHHHHHHHHHC-CCCEEEEECCEECCCCCCCCCC
T ss_conf 898981899963748699999999999871477-78974999899889999999735-7877875012001577420205
Q ss_pred CHHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCCCCC
Q ss_conf 06777540731001042000221357999999999999833474799816552033349800011100222100000013
Q gi|254780197|r 82 SANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEFKSS 161 (264)
Q Consensus 82 Sa~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~~~~ 161 (264)
|+.||+|+||+||||||||||++|+|+|++|++|++++++++|+||+||||++++|+.+++.+++.+|+...+.+....+
T Consensus 98 Sa~mLkd~G~~yviIGHSERR~~~~Etd~~i~~K~~~al~~~l~pI~CIGE~~~~~~~~~~~~~l~~Q~~~~~~~~~~~~ 177 (275)
T 1mo0_A 98 SPAMIKDLGLEWVILGHSERRHVFGESDALIAEKTVHALEAGIKVVFCIGEKLEEREAGHTKDVNFRQLQAIVDKGVSWE 177 (275)
T ss_dssp CHHHHHHTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHTTTCCST
T ss_pred CHHHHHHCCCCEEEECCHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHCHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 89999980998899735888865599708999999999875880899966718876130177779999998751244556
Q ss_pred CCEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHH-HCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCH
Q ss_conf 41132051353045576431124554467999999633224-16430886277898789999668989688974343588
Q gi|254780197|r 162 VPVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEE-GQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQH 240 (264)
Q Consensus 162 ~~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~-~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~ 240 (264)
++|||||||||||||++|++++|+++|++||+++.+.|+.. ++++|||||||||++|+++|+++++|||+||||||||+
T Consensus 178 ~iiIAYEPvWAIGtG~~a~~e~i~~~~~~Ir~~l~~~~~~~~~~~v~ILYGGSVn~~N~~~i~~~~~vDG~LVGgASLd~ 257 (275)
T 1mo0_A 178 NIVIAYEPVWAIGTGKTASGEQAQEVHEWIRAFLKEKVSPAVADATRIIYGGSVTADNAAELGKKPDIDGFLVGGASLKP 257 (275)
T ss_dssp TEEEEECCGGGTTTSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSCEEEESSCCTTTHHHHTTSTTCCEEEESGGGGST
T ss_pred CEEEEECCEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEECCCCCHHHHHHHHCCCCCCEEEEEHHHCCH
T ss_conf 61898776441378998998999999999999999860986618553895689898799999568898869940475686
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 999999999999999
Q gi|254780197|r 241 ELFLKIVEIVERVYV 255 (264)
Q Consensus 241 ~~F~~Ii~~~~~~~~ 255 (264)
+ |++||+++.+...
T Consensus 258 e-F~~Ii~~~~~~~~ 271 (275)
T 1mo0_A 258 D-FVKIINARSTALS 271 (275)
T ss_dssp H-HHHHHHHHSCC--
T ss_pred H-HHHHHHHHHHHHC
T ss_conf 6-9999999999853