HHsearch results for GI: 254780197 and protein with PDBid: 1mo0_A

>1mo0_A TIM, triosephosphate isomerase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; 1.70A {Caenorhabditis elegans} SCOP: c.1.1.1
Probab=100.00  E-value=0  Score=629.89  Aligned_cols=251  Identities=35%  Similarity=0.596  Sum_probs=235.1

Q ss_pred             CCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCC
Q ss_conf             98885069986465689999999999995222345771199968965599999973257631022201222333433212
Q gi|254780197|r    2 KVGIRPLVVGNWKMHGLRLSLERIQKIVEGIRRNSCCIDVAICPPATLIYESSRLCKTSSVIIGAQDCHIAEYGPYTGDI   81 (264)
Q Consensus         2 ~~~mK~iIigNWKMN~~~~~~~~~~~~~~~~~~~~~~veivi~Pp~~~L~~~~~~~~~s~I~igAQnv~~~~~GA~TGei   81 (264)
                      .|+||+||+||||||++..++..+.+.+..... ..++++++|||++||..+.+.++ ++|.+|||||++++.|||||||
T Consensus        20 ~m~rK~iIagNWKMN~~~~~~~~~~~~l~~~~~-~~~~~ivI~Pp~~~L~~v~~~l~-s~I~iGAQnvs~~~~GA~TGev   97 (275)
T 1mo0_A           20 GLTRKFFVGGNWKMNGDYASVDGIVTFLNASAD-NSSVDVVVAPPAPYLAYAKSKLK-AGVLVAAQNCYKVPKGAFTGEI   97 (275)
T ss_dssp             CSCSCEEEEEECCBCCCHHHHHHHHHHHHHSCC-CTTEEEEEECCGGGHHHHHHHSC-TTEEEEESCCCSSSSBSCTTCC
T ss_pred             CCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCC-CCCCEEEEECCHHHHHHHHHHHC-CCCEEEEECCEECCCCCCCCCC
T ss_conf             898981899963748699999999999871477-78974999899889999999735-7877875012001577420205


Q ss_pred             CHHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCCCCC
Q ss_conf             06777540731001042000221357999999999999833474799816552033349800011100222100000013
Q gi|254780197|r   82 SANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEFKSS  161 (264)
Q Consensus        82 Sa~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~~~~  161 (264)
                      |+.||+|+||+||||||||||++|+|+|++|++|++++++++|+||+||||++++|+.+++.+++.+|+...+.+....+
T Consensus        98 Sa~mLkd~G~~yviIGHSERR~~~~Etd~~i~~K~~~al~~~l~pI~CIGE~~~~~~~~~~~~~l~~Q~~~~~~~~~~~~  177 (275)
T 1mo0_A           98 SPAMIKDLGLEWVILGHSERRHVFGESDALIAEKTVHALEAGIKVVFCIGEKLEEREAGHTKDVNFRQLQAIVDKGVSWE  177 (275)
T ss_dssp             CHHHHHHTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHTTTCCST
T ss_pred             CHHHHHHCCCCEEEECCHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHCHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             89999980998899735888865599708999999999875880899966718876130177779999998751244556


Q ss_pred             CCEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHH-HCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCH
Q ss_conf             41132051353045576431124554467999999633224-16430886277898789999668989688974343588
Q gi|254780197|r  162 VPVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEE-GQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQH  240 (264)
Q Consensus       162 ~~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~-~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~  240 (264)
                      ++|||||||||||||++|++++|+++|++||+++.+.|+.. ++++|||||||||++|+++|+++++|||+||||||||+
T Consensus       178 ~iiIAYEPvWAIGtG~~a~~e~i~~~~~~Ir~~l~~~~~~~~~~~v~ILYGGSVn~~N~~~i~~~~~vDG~LVGgASLd~  257 (275)
T 1mo0_A          178 NIVIAYEPVWAIGTGKTASGEQAQEVHEWIRAFLKEKVSPAVADATRIIYGGSVTADNAAELGKKPDIDGFLVGGASLKP  257 (275)
T ss_dssp             TEEEEECCGGGTTTSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSCEEEESSCCTTTHHHHTTSTTCCEEEESGGGGST
T ss_pred             CEEEEECCEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEECCCCCHHHHHHHHCCCCCCEEEEEHHHCCH
T ss_conf             61898776441378998998999999999999999860986618553895689898799999568898869940475686


Q ss_pred             HHHHHHHHHHHHHHH
Q ss_conf             999999999999999
Q gi|254780197|r  241 ELFLKIVEIVERVYV  255 (264)
Q Consensus       241 ~~F~~Ii~~~~~~~~  255 (264)
                      + |++||+++.+...
T Consensus       258 e-F~~Ii~~~~~~~~  271 (275)
T 1mo0_A          258 D-FVKIINARSTALS  271 (275)
T ss_dssp             H-HHHHHHHHSCC--
T ss_pred             H-HHHHHHHHHHHHC
T ss_conf             6-9999999999853