HHsearch results for GI: 254780197 and protein with PDBid: 1qop_A
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=90.17 E-value=1 Score=23.89 Aligned_cols=55 Identities=15% Similarity=0.193 Sum_probs=37.6
Q ss_pred CCC-CCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCH-HHHHHHHCCCCCCEEEECHHHCC
Q ss_conf 557-643112455446799999963322416430886277898-78999966898968897434358
Q gi|254780197|r 175 TGR-VPAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVDV-ANAEDFSLIENIDGLLVGGASLQ 239 (264)
Q Consensus 175 tG~-~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~-~N~~~l~~~~~iDG~LVG~ASl~ 239 (264)
||. ..-+..+.+..+.+|+. .++||++|..++. +.+.+.++ ...||+-||+|-.+
T Consensus 183 TG~~~~~~~~~~~~i~~ik~~---------t~~Pv~vGFGI~~~e~v~~~~~-~~ADGvVVGSaiv~ 239 (268)
T 1qop_A 183 TGAENRGALPLHHLIEKLKEY---------HAAPALQGFGISSPEQVSAAVR-AGAAGAISGSAIVK 239 (268)
T ss_dssp CCSSSCC--CCHHHHHHHHHT---------TCCCEEEESSCCSHHHHHHHHH-TTCSEEEECHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHC---------CCCCCEEEECCCCHHHHHHHHH-CCCCEEEECHHHHH
T ss_conf 876543105689999999754---------6888357615699999999986-38998998889999