HHsearch results for GI: 254780197 and protein with PDBid: 1yya_A
>1yya_A Triosephosphate isomerase; riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.60A {Thermus thermophilus HB8}
Probab=100.00 E-value=0 Score=632.37 Aligned_cols=246 Identities=38% Similarity=0.575 Sum_probs=231.9
Q ss_pred CCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCH
Q ss_conf 88506998646568999999999999522234577119996896559999997325763102220122233343321206
Q gi|254780197|r 4 GIRPLVVGNWKMHGLRLSLERIQKIVEGIRRNSCCIDVAICPPATLIYESSRLCKTSSVIIGAQDCHIAEYGPYTGDISA 83 (264)
Q Consensus 4 ~mK~iIigNWKMN~~~~~~~~~~~~~~~~~~~~~~veivi~Pp~~~L~~~~~~~~~s~I~igAQnv~~~~~GA~TGeiSa 83 (264)
|+||||+||||||++..+...|.+.+..... ..+.++++|||++||..+++.+++++|.+||||||+++.||||||||+
T Consensus 1 Mrk~iI~~NWKmn~~~~~~~~~~~~l~~~~~-~~~~~v~i~P~~~~l~~~~~~~~~~~i~igaQn~~~~~~Ga~TGeiSa 79 (250)
T 1yya_A 1 MRRVLVAGNWKMHKTPSEARVWFAELKRLLP-PLQSEAAVLPAFPILPVAKEVLAETQVGYGAQDVSAHKEGAYTGEVSA 79 (250)
T ss_dssp CCCCEEEEECCBCCCHHHHHHHHHHHHHHCC-CCSSEEEEECCGGGHHHHHHHHTTSSCEEEESCCCSSSSBSCTTCCCH
T ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHHHHCC-CCCCCEEEECCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCH
T ss_conf 9988899962257999999999999986478-657888998984579999987445675574452343468877562368
Q ss_pred HHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCC--CCC
Q ss_conf 777540731001042000221357999999999999833474799816552033349800011100222100000--013
Q gi|254780197|r 84 NMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEF--KSS 161 (264)
Q Consensus 84 ~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~--~~~ 161 (264)
.||+|+||+||||||||||++|+|||++|++|+++|+++||+||+||||++++|+.+.+.+++.+||...+.++. ..+
T Consensus 80 ~mLkd~G~~yviiGHSERR~~f~Etde~I~~K~~~al~~~l~pIlCIGE~~~er~~~~~~~~l~~Ql~~~l~~v~~~~~~ 159 (250)
T 1yya_A 80 RMLSDLGCRYAIVGHSERRRYHGETDALVAEKAKRLLEEGITPILCVGEPLEVREKGEAVPYTLRQLRGSLEGVEPPGPE 159 (250)
T ss_dssp HHHHHTTCSEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHTTTCCCSSGG
T ss_pred HHHHHCCCEEEEECCHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHCCCCHHHHHHHHHHHHHCCCHHHHH
T ss_conf 99986098289844578775159970889999999997799589993776999973883789999999987036555530
Q ss_pred CCEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHH-HCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCH
Q ss_conf 41132051353045576431124554467999999633224-16430886277898789999668989688974343588
Q gi|254780197|r 162 VPVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEE-GQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQH 240 (264)
Q Consensus 162 ~~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~-~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~ 240 (264)
+++||||||||||||++|+|++++++|.+||+.+.+.|++. ++++||||||||+++|+++|+++++|||+||||||||+
T Consensus 160 ~iiIAYEPvWAIGtg~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~~v~ilYGGSV~~~N~~~i~~~~~vDG~LVG~ASl~~ 239 (250)
T 1yya_A 160 ALVIAYEPVWAIGTGKNATPEDAEAMHQAIRKALSERYGEAFASRVRILYGGSVNPKNFADLLSMPNVDGGLVGGASLEL 239 (250)
T ss_dssp GCEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHHCHHHHTTCEEEEESSCCTTTHHHHHTSTTCCEEEESGGGSSH
T ss_pred CEEEEECCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCH
T ss_conf 61787442440278988986899999999999999851142237763896288898699998567899868842565788
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999999
Q gi|254780197|r 241 ELFLKIVEIV 250 (264)
Q Consensus 241 ~~F~~Ii~~~ 250 (264)
++|++|++++
T Consensus 240 ~~F~~Ii~~a 249 (250)
T 1yya_A 240 ESFLALLRIA 249 (250)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHC
T ss_conf 9999999964