HHsearch results for GI: 254780197 and protein with PDBid: 1yya_A

>1yya_A Triosephosphate isomerase; riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.60A {Thermus thermophilus HB8}
Probab=100.00  E-value=0  Score=632.37  Aligned_cols=246  Identities=38%  Similarity=0.575  Sum_probs=231.9

Q ss_pred             CCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCH
Q ss_conf             88506998646568999999999999522234577119996896559999997325763102220122233343321206
Q gi|254780197|r    4 GIRPLVVGNWKMHGLRLSLERIQKIVEGIRRNSCCIDVAICPPATLIYESSRLCKTSSVIIGAQDCHIAEYGPYTGDISA   83 (264)
Q Consensus         4 ~mK~iIigNWKMN~~~~~~~~~~~~~~~~~~~~~~veivi~Pp~~~L~~~~~~~~~s~I~igAQnv~~~~~GA~TGeiSa   83 (264)
                      |+||||+||||||++..+...|.+.+..... ..+.++++|||++||..+++.+++++|.+||||||+++.||||||||+
T Consensus         1 Mrk~iI~~NWKmn~~~~~~~~~~~~l~~~~~-~~~~~v~i~P~~~~l~~~~~~~~~~~i~igaQn~~~~~~Ga~TGeiSa   79 (250)
T 1yya_A            1 MRRVLVAGNWKMHKTPSEARVWFAELKRLLP-PLQSEAAVLPAFPILPVAKEVLAETQVGYGAQDVSAHKEGAYTGEVSA   79 (250)
T ss_dssp             CCCCEEEEECCBCCCHHHHHHHHHHHHHHCC-CCSSEEEEECCGGGHHHHHHHHTTSSCEEEESCCCSSSSBSCTTCCCH
T ss_pred             CCCCEEEEEECCCCCHHHHHHHHHHHHHHCC-CCCCCEEEECCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCH
T ss_conf             9988899962257999999999999986478-657888998984579999987445675574452343468877562368


Q ss_pred             HHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCC--CCC
Q ss_conf             777540731001042000221357999999999999833474799816552033349800011100222100000--013
Q gi|254780197|r   84 NMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEF--KSS  161 (264)
Q Consensus        84 ~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~--~~~  161 (264)
                      .||+|+||+||||||||||++|+|||++|++|+++|+++||+||+||||++++|+.+.+.+++.+||...+.++.  ..+
T Consensus        80 ~mLkd~G~~yviiGHSERR~~f~Etde~I~~K~~~al~~~l~pIlCIGE~~~er~~~~~~~~l~~Ql~~~l~~v~~~~~~  159 (250)
T 1yya_A           80 RMLSDLGCRYAIVGHSERRRYHGETDALVAEKAKRLLEEGITPILCVGEPLEVREKGEAVPYTLRQLRGSLEGVEPPGPE  159 (250)
T ss_dssp             HHHHHTTCSEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHTTTCCCSSGG
T ss_pred             HHHHHCCCEEEEECCHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHCCCCHHHHHHHHHHHHHCCCHHHHH
T ss_conf             99986098289844578775159970889999999997799589993776999973883789999999987036555530


Q ss_pred             CCEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHH-HCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCH
Q ss_conf             41132051353045576431124554467999999633224-16430886277898789999668989688974343588
Q gi|254780197|r  162 VPVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEE-GQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQH  240 (264)
Q Consensus       162 ~~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~-~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~  240 (264)
                      +++||||||||||||++|+|++++++|.+||+.+.+.|++. ++++||||||||+++|+++|+++++|||+||||||||+
T Consensus       160 ~iiIAYEPvWAIGtg~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~~v~ilYGGSV~~~N~~~i~~~~~vDG~LVG~ASl~~  239 (250)
T 1yya_A          160 ALVIAYEPVWAIGTGKNATPEDAEAMHQAIRKALSERYGEAFASRVRILYGGSVNPKNFADLLSMPNVDGGLVGGASLEL  239 (250)
T ss_dssp             GCEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHHCHHHHTTCEEEEESSCCTTTHHHHHTSTTCCEEEESGGGSSH
T ss_pred             CEEEEECCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCH
T ss_conf             61787442440278988986899999999999999851142237763896288898699998567899868842565788


Q ss_pred             HHHHHHHHHH
Q ss_conf             9999999999
Q gi|254780197|r  241 ELFLKIVEIV  250 (264)
Q Consensus       241 ~~F~~Ii~~~  250 (264)
                      ++|++|++++
T Consensus       240 ~~F~~Ii~~a  249 (250)
T 1yya_A          240 ESFLALLRIA  249 (250)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHC
T ss_conf             9999999964