HHsearch results for GI: 254780197 and protein with PDBid: 3kxq_A
>3kxq_A Triosephosphate isomerase; ssgcid, NIH, niaid, SBRI, UW, cytoplasm, gluconeogenesis, glycolysis, pentose shunt, structural genomics; 1.60A {Bartonella henselae}
Probab=100.00 E-value=0 Score=657.73 Aligned_cols=253 Identities=42% Similarity=0.778 Sum_probs=240.0
Q ss_pred CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCC-CCCCEEEEECCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCC
Q ss_conf 99888506998646568999999999999522234-57711999689655999999732576310222012223334332
Q gi|254780197|r 1 MKVGIRPLVVGNWKMHGLRLSLERIQKIVEGIRRN-SCCIDVAICPPATLIYESSRLCKTSSVIIGAQDCHIAEYGPYTG 79 (264)
Q Consensus 1 m~~~mK~iIigNWKMN~~~~~~~~~~~~~~~~~~~-~~~veivi~Pp~~~L~~~~~~~~~s~I~igAQnv~~~~~GA~TG 79 (264)
|..+||||||||||||++.+++..+.+.+.....+ ..++++++|||++||..+.+.+++++|.+|||||++.+.|||||
T Consensus 22 m~~~mK~iI~gNWKMN~~~~~~~~~~~~~~~~~~~~~~~~evvi~Pp~~~l~~~~~~~~~~~i~lgAQn~~~~~~GA~TG 101 (275)
T 3kxq_A 22 MSPNIRPFIAGNWKMNGTGESLGELRAIAAGISSDLGRLFEALICVPATLLSRAFDILGGENILLGGQNCHFDDYGPYTG 101 (275)
T ss_dssp ----CCCEEEEECCBCCCGGGHHHHHHHHHHHC----CCSEEEEECCTTTHHHHHHHHTTSSSEEEESCCCSSSSBSCTT
T ss_pred CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCC
T ss_conf 68888828999414589999999999999851001057871999899899999999846997178403343446776656
Q ss_pred CCCHHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCCC
Q ss_conf 12067775407310010420002213579999999999998334747998165520333498000111002221000000
Q gi|254780197|r 80 DISANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEFK 159 (264)
Q Consensus 80 eiSa~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~~ 159 (264)
|||+.||+|+||+||||||||||.+|+|||++|++|+++|+++||+||+||||++++|+.+++.+++.+|+..++.+...
T Consensus 102 eISa~mLkd~g~~yvIIGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCIGEt~e~r~~~~t~~~l~~Ql~~~l~~~~~ 181 (275)
T 3kxq_A 102 DISAFMLKEAGASHVIIGHSERRTVYQESDAIVRAKVQAAWRAGLVALICVGETLEERKSNKVLDVLTRQLEGSLPDGAT 181 (275)
T ss_dssp CCCHHHHHHHTCSEEEESCHHHHHHTCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHSCTTCC
T ss_pred CCCHHHHHHCCCCEEEECCHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHCCCHHHHHHHHHHHHHCCCCC
T ss_conf 45899998769987886345653037987399999999999879917999545067540687499999999987136643
Q ss_pred CCCCEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCC
Q ss_conf 13411320513530455764311245544679999996332241643088627789878999966898968897434358
Q gi|254780197|r 160 SSVPVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQ 239 (264)
Q Consensus 160 ~~~~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~ 239 (264)
.++++||||||||||||++|++++|+++|++||+++.+.|+..+.++|||||||||++|+++|+++++|||+||||||||
T Consensus 182 ~~~iiIAYEPvWAIGTG~~as~~~i~~~~~~Ir~~l~~~~~~~~~~v~ILYGGSV~~~N~~~i~~~~~vDG~LVGgASL~ 261 (275)
T 3kxq_A 182 AENIIIAYEPVWAVGTGNTATSADVAEVHAFIHHKMHSRFGDEGAKIRLLYGGSVKPSNAFELLSTAHVNGALIGGASLK 261 (275)
T ss_dssp TTTEEEEECCCC--------CHHHHHHHHHHHHHHHHHHHHHHHTTSCEEECSCCCTTTHHHHHTSTTCCEEEESGGGSS
T ss_pred CCCEEEEECCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHCCCCCCEEEECHHHCC
T ss_conf 35349987774224789999809999999999999998713224781099707899879999956889897993256579
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 89999999999999
Q gi|254780197|r 240 HELFLKIVEIVERV 253 (264)
Q Consensus 240 ~~~F~~Ii~~~~~~ 253 (264)
+++|++|++.++|+
T Consensus 262 ~e~F~~Ii~~~~k~ 275 (275)
T 3kxq_A 262 AIDFLTICDVYRKL 275 (275)
T ss_dssp HHHHHHHHGGGGC-
T ss_pred HHHHHHHHHHHHHC
T ss_conf 89999999999649