Query gi|254780197|ref|YP_003064610.1| triosephosphate isomerase protein [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 264
No_of_seqs 156 out of 3001
Neff 6.4
Searched_HMMs 23785
Date Mon May 23 13:14:33 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780197.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kxq_A Triosephosphate isomera 100.0 0 0 657.7 17.7 253 1-253 22-275 (275)
2 3krs_A Triosephosphate isomera 100.0 0 0 643.4 20.5 247 2-251 21-271 (271)
3 3gvg_A Triosephosphate isomera 100.0 0 0 636.7 22.9 249 3-251 23-278 (283)
4 1tre_A Triosephosphate isomera 100.0 0 0 635.5 22.9 251 4-254 1-253 (255)
5 2dp3_A Triosephosphate isomera 100.0 0 0 634.2 22.5 248 5-254 4-256 (257)
6 1yya_A Triosephosphate isomera 100.0 0 0 632.4 23.5 246 4-250 1-249 (250)
7 1o5x_A TIM, triosephosphate is 100.0 0 0 632.9 21.5 246 3-250 1-247 (248)
8 2vxn_A Triosephosphate isomera 100.0 0 0 630.8 20.4 247 1-250 1-250 (251)
9 1b9b_A TIM, protein (triosepho 100.0 0 0 631.0 20.0 250 3-253 1-253 (255)
10 1mo0_A TIM, triosephosphate is 100.0 0 0 629.9 20.8 251 2-255 20-271 (275)
11 1aw2_A Triosephosphate isomera 100.0 0 0 627.7 21.7 251 4-254 1-255 (256)
12 2btm_A TIM, protein (triosepho 100.0 0 0 628.7 20.8 248 5-252 1-251 (252)
13 1ney_A TIM, triosephosphate is 100.0 0 0 630.6 18.9 244 4-249 1-245 (247)
14 2i9e_A Triosephosphate isomera 100.0 0 0 628.4 20.0 248 3-253 1-249 (259)
15 2j27_A Triosephosphate isomera 100.0 0 0 625.7 20.1 244 4-250 3-249 (250)
16 1r2r_A TIM, triosephosphate is 100.0 0 0 618.4 21.2 246 2-250 1-247 (248)
17 1m6j_A TIM, TPI, triosephospha 100.0 0 0 619.7 19.9 248 4-252 3-259 (261)
18 2v5b_A Triosephosphate isomera 100.0 0 0 594.9 17.6 240 1-250 1-243 (244)
19 2jgq_A Triosephosphate isomera 100.0 0 0 562.5 16.1 231 6-249 1-232 (233)
20 2h6r_A Triosephosphate isomera 100.0 0 0 446.6 12.7 213 8-251 2-216 (219)
21 1hg3_A Triosephosphate isomera 100.0 0 0 428.1 16.3 220 1-251 1-222 (225)
22 1w0m_A TIM, triosephosphate is 100.0 0 0 418.5 16.1 220 4-254 1-223 (226)
23 3inp_A D-ribulose-phosphate 3- 94.9 0.2 8.5E-06 28.3 9.0 139 83-251 102-240 (246)
24 1tqj_A Ribulose-phosphate 3-ep 94.8 0.14 6E-06 29.2 7.8 143 83-253 78-220 (230)
25 1rd5_A Tryptophan synthase alp 94.3 0.3 1.3E-05 27.2 12.9 54 175-238 179-234 (262)
26 1ka9_F Imidazole glycerol phos 91.7 0.72 3E-05 24.8 9.3 137 82-239 89-230 (252)
27 1vhn_A Putative flavin oxidore 91.5 0.26 1.1E-05 27.6 5.0 45 204-248 182-228 (318)
28 1vzw_A Phosphoribosyl isomeras 91.2 0.21 8.8E-06 28.2 4.2 136 80-239 87-227 (244)
29 1viz_A PCRB protein homolog; s 90.4 0.31 1.3E-05 27.1 4.5 45 204-250 181-227 (240)
30 2ekc_A AQ_1548, tryptophan syn 90.2 0.92 3.9E-05 24.1 6.8 111 114-238 113-238 (262)
31 1qop_A Tryptophan synthase alp 90.2 1 4.3E-05 23.9 11.5 55 175-239 183-239 (268)
32 2p10_A MLL9387 protein; putati 90.1 0.61 2.6E-05 25.3 5.7 103 116-238 156-262 (286)
33 3nav_A Tryptophan synthase alp 89.5 1.1 4.8E-05 23.6 11.2 55 175-239 186-242 (271)
34 3ctl_A D-allulose-6-phosphate 89.2 1.2 5E-05 23.4 10.1 146 83-257 73-220 (231)
35 1h5y_A HISF; histidine biosynt 88.8 0.5 2.1E-05 25.8 4.5 132 82-240 91-233 (253)
36 2fli_A Ribulose-phosphate 3-ep 88.5 1.3 5.7E-05 23.1 9.7 139 83-251 77-215 (220)
37 3jr2_A Hexulose-6-phosphate sy 88.3 1.1 4.6E-05 23.7 6.0 139 79-252 72-215 (218)
38 1thf_D HISF protein; thermophI 88.3 0.85 3.6E-05 24.4 5.4 139 75-240 81-230 (253)
39 1qo2_A Molecule: N-((5-phospho 88.0 0.55 2.3E-05 25.5 4.4 137 75-239 80-228 (241)
40 2prs_A High-affinity zinc upta 87.8 1.5 6.2E-05 22.9 8.0 90 161-260 174-283 (284)
41 1geq_A Tryptophan synthase alp 85.8 1.9 8E-05 22.2 9.9 56 174-239 167-225 (248)
42 1yxy_A Putative N-acetylmannos 85.3 1.1 4.7E-05 23.6 4.7 38 204-242 185-223 (234)
43 2hsa_B 12-oxophytodienoate red 84.8 1.7 7E-05 22.5 5.4 51 182-241 305-356 (402)
44 2i1o_A Nicotinate phosphoribos 84.0 2.3 9.7E-05 21.7 6.2 53 183-239 251-303 (398)
45 3civ_A Endo-beta-1,4-mannanase 82.9 2.4 0.0001 21.5 5.6 58 74-131 47-118 (343)
46 2w6r_A Imidazole glycerol phos 81.2 1.1 4.8E-05 23.6 3.4 137 82-241 88-236 (266)
47 2x8r_A Glycosyl hydrolase; pep 81.1 3 0.00012 21.0 6.4 49 76-127 11-59 (210)
48 2vws_A YFAU, 2-keto-3-deoxy su 80.3 2.6 0.00011 21.3 5.0 174 53-255 9-207 (267)
49 2i14_A Nicotinate-nucleotide p 80.1 2.7 0.00011 21.2 5.0 51 183-238 249-299 (395)
50 1icp_A OPR1, 12-oxophytodienoa 79.6 3.3 0.00014 20.7 8.1 146 82-245 172-341 (376)
51 1h1y_A D-ribulose-5-phosphate 79.5 3.3 0.00014 20.6 9.5 144 83-257 80-224 (228)
52 2f6u_A GGGPS, (S)-3-O-geranylg 79.4 1.7 7.2E-05 22.5 3.8 32 204-237 189-221 (234)
53 1ujp_A Tryptophan synthase alp 78.6 3.6 0.00015 20.5 8.5 53 175-239 180-234 (271)
54 1xi3_A Thiamine phosphate pyro 77.9 3.7 0.00016 20.4 6.5 135 83-257 79-213 (215)
55 2gou_A Oxidoreductase, FMN-bin 77.6 2.3 9.7E-05 21.7 4.0 38 204-241 292-330 (365)
56 2bdq_A Copper homeostasis prot 76.9 2.5 0.00011 21.4 4.1 164 42-237 35-209 (224)
57 1dxe_A 2-dehydro-3-deoxy-galac 76.3 4.1 0.00017 20.1 5.1 159 53-238 10-180 (256)
58 2tps_A Protein (thiamin phosph 74.6 4.6 0.00019 19.8 6.8 80 164-252 139-225 (227)
59 2agk_A 1-(5-phosphoribosyl)-5- 74.6 1.6 6.6E-05 22.7 2.5 72 172-252 181-258 (260)
60 2yw3_A 4-hydroxy-2-oxoglutarat 74.1 3.5 0.00015 20.5 4.2 159 36-253 39-197 (207)
61 1izc_A Macrophomate synthase i 70.0 1.8 7.4E-05 22.4 1.9 67 78-156 51-120 (339)
62 3gka_A N-ethylmaleimide reduct 70.0 4.5 0.00019 19.8 4.0 37 205-241 287-324 (361)
63 3iwp_A Copper homeostasis prot 69.0 2.9 0.00012 21.0 2.9 122 82-234 116-238 (287)
64 3kru_A NADH:flavin oxidoreduct 66.1 7 0.00029 18.6 5.8 48 185-241 266-315 (343)
65 2v5j_A 2,4-dihydroxyhept-2-ENE 64.6 2.5 0.0001 21.5 1.8 143 79-239 49-202 (287)
66 1y0e_A Putative N-acetylmannos 64.0 7.7 0.00032 18.4 12.5 136 78-243 76-213 (223)
67 1jvn_A Glutamine, bifunctional 63.2 7.9 0.00033 18.3 4.2 41 204-245 326-379 (555)
68 3igs_A N-acetylmannosamine-6-p 62.5 8.2 0.00034 18.2 8.2 48 204-252 180-229 (232)
69 1q6o_A Humps, 3-keto-L-gulonat 61.4 8.6 0.00036 18.1 10.0 140 77-250 67-207 (216)
70 3hh8_A Metal ABC transporter s 59.7 9.1 0.00038 17.9 5.3 94 153-256 175-290 (294)
71 1vyr_A Pentaerythritol tetrani 59.0 9.4 0.0004 17.8 5.3 40 205-245 294-334 (364)
72 2jbm_A Nicotinate-nucleotide p 58.9 9.4 0.0004 17.8 4.3 51 179-238 226-276 (299)
73 2f7f_A Nicotinate phosphoribos 57.1 10 0.00042 17.6 6.2 58 179-239 263-321 (494)
74 2b7n_A Probable nicotinate-nuc 55.0 11 0.00046 17.4 4.6 49 179-236 211-259 (273)
75 1o4u_A Type II quinolic acid p 54.4 7.6 0.00032 18.4 2.8 52 179-239 222-273 (285)
76 1vhc_A Putative KHG/KDPG aldol 54.0 11 0.00048 17.3 5.3 66 189-262 146-217 (224)
77 1vjz_A Endoglucanase; TM1752, 53.9 11 0.00048 17.3 6.6 56 74-130 34-97 (341)
78 2ze6_A Isopentenyl transferase 52.8 9.9 0.00042 17.7 3.2 55 77-133 44-100 (253)
79 1qpo_A Quinolinate acid phosph 52.6 12 0.0005 17.2 4.4 52 179-239 223-274 (284)
80 2r14_A Morphinone reductase; H 52.1 12 0.00051 17.1 4.1 42 205-247 299-341 (377)
81 1toa_A Tromp-1, protein (perip 51.6 12 0.00052 17.1 4.1 80 161-250 197-303 (313)
82 3fkr_A L-2-keto-3-deoxyarabona 51.0 13 0.00053 17.0 4.9 45 85-129 98-142 (309)
83 1xky_A Dihydrodipicolinate syn 50.7 13 0.00054 17.0 5.5 134 84-253 101-235 (301)
84 1rpx_A Protein (ribulose-phosp 50.2 13 0.00055 16.9 8.8 141 83-251 84-224 (230)
85 1f6k_A N-acetylneuraminate lya 50.0 13 0.00055 16.9 5.8 44 205-252 182-225 (293)
86 2v9d_A YAGE; dihydrodipicolini 48.9 14 0.00057 16.8 4.9 45 204-252 213-257 (343)
87 3dhf_A Nicotinamide phosphorib 48.6 14 0.00058 16.8 4.3 59 179-237 312-386 (484)
88 2nv1_A Pyridoxal biosynthesis 48.5 14 0.00057 16.8 3.3 44 205-249 210-257 (305)
89 1wv2_A Thiazole moeity, thiazo 47.4 8.6 0.00036 18.1 2.2 155 71-257 78-242 (265)
90 3ceu_A Thiamine phosphate pyro 47.0 15 0.00061 16.6 4.8 199 5-262 1-206 (210)
91 1twd_A Copper homeostasis prot 46.5 15 0.00063 16.6 5.5 158 42-232 35-196 (256)
92 3l5l_A Xenobiotic reductase A; 45.7 15 0.00064 16.5 5.9 54 182-245 281-336 (363)
93 3ohe_A Histidine triad (HIT) p 44.7 12 0.00049 17.3 2.5 31 168-198 106-136 (137)
94 1u1j_A 5-methyltetrahydroptero 43.6 16 0.00069 16.3 6.5 59 166-233 205-266 (765)
95 1to3_A Putative aldolase YIHT; 43.4 15 0.00064 16.5 3.0 139 79-239 110-259 (304)
96 3iv3_A Tagatose 1,6-diphosphat 43.0 17 0.00071 16.3 8.2 208 18-239 48-285 (332)
97 3c2e_A Nicotinate-nucleotide p 42.6 12 0.00051 17.1 2.4 55 179-239 228-282 (294)
98 2ojp_A DHDPS, dihydrodipicolin 42.4 17 0.00072 16.2 4.4 45 204-252 179-223 (292)
99 1xvl_A Mn transporter, MNTC pr 41.8 18 0.00074 16.1 6.5 92 160-260 203-315 (321)
100 2wag_A Lysozyme, putative; hyd 41.4 18 0.00075 16.1 7.3 49 76-127 23-71 (220)
101 1yad_A Regulatory protein TENI 41.3 18 0.00075 16.1 6.3 77 164-251 133-209 (221)
102 2nuw_A 2-keto-3-deoxygluconate 39.4 19 0.00081 15.9 4.8 42 205-251 171-212 (288)
103 3b4u_A Dihydrodipicolinate syn 39.3 19 0.00081 15.9 5.1 40 205-248 187-226 (294)
104 1wbh_A KHG/KDPG aldolase; lyas 39.2 18 0.00074 16.1 2.7 149 37-243 43-192 (214)
105 1ceo_A Cellulase CELC; glycosy 38.6 20 0.00083 15.8 6.4 48 83-130 34-89 (343)
106 2r8w_A AGR_C_1641P; APC7498, d 38.3 20 0.00084 15.8 8.9 46 203-252 215-260 (332)
107 2ehh_A DHDPS, dihydrodipicolin 37.7 20 0.00086 15.7 4.4 49 204-256 179-227 (294)
108 3noe_A DAP-A, dihydrodipicolin 37.2 21 0.00087 15.7 4.5 45 204-252 179-223 (292)
109 3i24_A HIT family hydrolase; s 36.9 11 0.00048 17.3 1.5 34 168-201 106-139 (149)
110 3exr_A RMPD (hexulose-6-phosph 35.9 22 0.00091 15.6 6.1 133 78-242 70-204 (221)
111 1qap_A Quinolinic acid phospho 35.7 22 0.00092 15.5 3.3 32 204-236 251-282 (296)
112 3i4s_A Histidine triad protein 35.3 18 0.00075 16.1 2.3 28 168-195 111-138 (149)
113 3h5d_A DHDPS, dihydrodipicolin 35.2 22 0.00094 15.5 4.1 46 203-252 184-229 (311)
114 3gr7_A NADPH dehydrogenase; fl 34.7 23 0.00096 15.4 8.7 40 205-245 277-318 (340)
115 3d3q_A TRNA delta(2)-isopenten 33.7 24 0.00099 15.3 3.7 53 78-132 51-105 (340)
116 1jfx_A 1,4-beta-N-acetylmurami 33.1 24 0.001 15.3 6.1 49 76-127 12-60 (217)
117 1yy3_A S-adenosylmethionine:tR 32.9 16 0.00067 16.4 1.7 65 65-134 167-260 (346)
118 3nl6_A Thiamine biosynthetic b 32.2 25 0.001 15.2 6.2 36 204-239 172-214 (540)
119 1ivy_A Human protective protei 32.2 25 0.001 15.2 3.2 19 38-56 141-162 (452)
120 2wkj_A N-acetylneuraminate lya 32.1 25 0.0011 15.2 5.1 45 204-252 189-233 (303)
121 1wdi_A Hypothetical protein TT 31.7 16 0.00067 16.4 1.5 64 66-134 169-260 (345)
122 2nu8_B SCS-beta, succinyl-COA 31.5 26 0.0011 15.1 5.7 46 208-253 287-339 (388)
123 3e96_A Dihydrodipicolinate syn 30.9 26 0.0011 15.0 4.0 45 205-252 188-232 (316)
124 3eph_A TRNA isopentenyltransfe 30.5 27 0.0011 15.0 3.0 30 24-54 79-108 (409)
125 3foz_A TRNA delta(2)-isopenten 29.7 27 0.0012 14.9 2.7 56 77-134 53-110 (316)
126 1bqc_A Protein (beta-mannanase 29.4 28 0.0012 14.9 6.9 50 82-131 37-86 (302)
127 1ece_A Endocellulase E1; glyco 29.2 28 0.0012 14.9 7.8 19 110-128 95-113 (358)
128 1ep3_A Dihydroorotate dehydrog 28.7 29 0.0012 14.8 6.8 48 205-253 241-290 (311)
129 1tqx_A D-ribulose-5-phosphate 28.4 29 0.0012 14.8 10.2 124 106-253 97-220 (227)
130 3exa_A TRNA delta(2)-isopenten 28.4 29 0.0012 14.8 2.7 54 78-133 47-102 (322)
131 3cu2_A Ribulose-5-phosphate 3- 27.9 29 0.0012 14.7 6.1 70 163-240 153-223 (237)
132 3cpr_A Dihydrodipicolinate syn 27.9 30 0.0012 14.7 5.1 133 83-252 104-236 (304)
133 3m5v_A DHDPS, dihydrodipicolin 27.9 30 0.0012 14.7 3.9 42 208-252 189-230 (301)
134 3nrd_A Histidine triad (HIT) p 27.8 19 0.00079 16.0 1.3 28 168-195 108-135 (135)
135 1w3i_A EDA, 2-keto-3-deoxy glu 27.4 30 0.0013 14.7 4.6 26 226-251 189-214 (293)
136 2rfg_A Dihydrodipicolinate syn 26.3 32 0.0013 14.5 4.3 46 204-253 178-223 (297)
137 1x1o_A Nicotinate-nucleotide p 26.0 32 0.0013 14.5 3.6 45 180-236 226-270 (286)
138 1vc4_A Indole-3-glycerol phosp 25.6 32 0.0014 14.5 3.0 37 204-242 208-244 (254)
139 2vc6_A MOSA, dihydrodipicolina 25.4 33 0.0014 14.4 4.0 26 226-251 197-222 (292)
140 3cwo_X Beta/alpha-barrel prote 25.4 33 0.0014 14.4 2.7 54 171-238 153-207 (237)
141 2v82_A 2-dehydro-3-deoxy-6-pho 25.1 33 0.0014 14.4 6.3 166 36-258 33-204 (212)
142 2zbt_A Pyridoxal biosynthesis 24.8 34 0.0014 14.4 4.1 44 205-249 210-257 (297)
143 2yxg_A DHDPS, dihydrodipicolin 24.8 34 0.0014 14.4 4.6 27 226-252 195-221 (289)
144 1xg4_A Probable methylisocitra 24.8 34 0.0014 14.4 3.6 43 209-253 211-253 (295)
145 3eoo_A Methylisocitrate lyase; 24.6 34 0.0014 14.4 3.0 24 104-128 93-116 (298)
146 3icg_A Endoglucanase D; cellul 24.6 34 0.0014 14.3 4.7 56 76-131 44-107 (515)
147 1o5k_A DHDPS, dihydrodipicolin 24.6 34 0.0014 14.3 4.7 27 226-252 212-238 (306)
148 3gi1_A LBP, laminin-binding pr 24.4 34 0.0014 14.3 5.1 80 161-250 179-277 (286)
149 3crm_A TRNA delta(2)-isopenten 24.2 34 0.0014 14.3 2.7 54 77-132 48-103 (323)
150 2r91_A 2-keto-3-deoxy-(6-phosp 24.1 35 0.0015 14.3 4.3 43 205-251 171-213 (286)
151 2htm_A Thiazole biosynthesis p 24.1 35 0.0015 14.3 3.8 149 71-250 68-223 (268)
152 1z41_A YQJM, probable NADH-dep 23.4 36 0.0015 14.2 9.9 51 185-245 266-318 (338)
153 3hgj_A Chromate reductase; TIM 23.3 36 0.0015 14.2 6.0 50 183-241 275-326 (349)
154 2yyb_A Hypothetical protein TT 22.9 26 0.0011 15.1 1.3 135 86-239 53-193 (242)
155 1whs_A Serine carboxypeptidase 22.8 35 0.0015 14.3 1.9 59 184-242 125-190 (255)
156 1mxs_A KDPG aldolase; 2-keto-3 22.1 38 0.0016 14.0 3.9 57 189-252 155-217 (225)
157 3flu_A DHDPS, dihydrodipicolin 21.7 39 0.0016 14.0 5.3 46 204-253 185-230 (297)
158 1nsj_A PRAI, phosphoribosyl an 21.0 40 0.0017 13.9 3.0 46 174-233 134-179 (205)
159 1w91_A Beta-xylosidase; MAD, s 20.8 40 0.0017 13.9 2.7 20 114-133 84-103 (503)
160 1j8c_A Ubiquitin-like protein 20.1 37 0.0016 14.1 1.6 45 186-231 52-96 (125)
No 1
>3kxq_A Triosephosphate isomerase; ssgcid, NIH, niaid, SBRI, UW, cytoplasm, gluconeogenesis, glycolysis, pentose shunt, structural genomics; 1.60A {Bartonella henselae}
Probab=100.00 E-value=0 Score=657.73 Aligned_cols=253 Identities=42% Similarity=0.778 Sum_probs=240.0
Q ss_pred CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCC-CCCCEEEEECCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCC
Q ss_conf 99888506998646568999999999999522234-57711999689655999999732576310222012223334332
Q gi|254780197|r 1 MKVGIRPLVVGNWKMHGLRLSLERIQKIVEGIRRN-SCCIDVAICPPATLIYESSRLCKTSSVIIGAQDCHIAEYGPYTG 79 (264)
Q Consensus 1 m~~~mK~iIigNWKMN~~~~~~~~~~~~~~~~~~~-~~~veivi~Pp~~~L~~~~~~~~~s~I~igAQnv~~~~~GA~TG 79 (264)
|..+||||||||||||++.+++..+.+.+.....+ ..++++++|||++||..+.+.+++++|.+|||||++.+.|||||
T Consensus 22 m~~~mK~iI~gNWKMN~~~~~~~~~~~~~~~~~~~~~~~~evvi~Pp~~~l~~~~~~~~~~~i~lgAQn~~~~~~GA~TG 101 (275)
T 3kxq_A 22 MSPNIRPFIAGNWKMNGTGESLGELRAIAAGISSDLGRLFEALICVPATLLSRAFDILGGENILLGGQNCHFDDYGPYTG 101 (275)
T ss_dssp ----CCCEEEEECCBCCCGGGHHHHHHHHHHHC----CCSEEEEECCTTTHHHHHHHHTTSSSEEEESCCCSSSSBSCTT
T ss_pred CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCC
T ss_conf 68888828999414589999999999999851001057871999899899999999846997178403343446776656
Q ss_pred CCCHHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCCC
Q ss_conf 12067775407310010420002213579999999999998334747998165520333498000111002221000000
Q gi|254780197|r 80 DISANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEFK 159 (264)
Q Consensus 80 eiSa~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~~ 159 (264)
|||+.||+|+||+||||||||||.+|+|||++|++|+++|+++||+||+||||++++|+.+++.+++.+|+..++.+...
T Consensus 102 eISa~mLkd~g~~yvIIGHSERR~~~~Etd~~i~~Kv~~al~~gl~pIlCIGEt~e~r~~~~t~~~l~~Ql~~~l~~~~~ 181 (275)
T 3kxq_A 102 DISAFMLKEAGASHVIIGHSERRTVYQESDAIVRAKVQAAWRAGLVALICVGETLEERKSNKVLDVLTRQLEGSLPDGAT 181 (275)
T ss_dssp CCCHHHHHHHTCSEEEESCHHHHHHTCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHSCTTCC
T ss_pred CCCHHHHHHCCCCEEEECCHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHCCCHHHHHHHHHHHHHCCCCC
T ss_conf 45899998769987886345653037987399999999999879917999545067540687499999999987136643
Q ss_pred CCCCEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCC
Q ss_conf 13411320513530455764311245544679999996332241643088627789878999966898968897434358
Q gi|254780197|r 160 SSVPVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQ 239 (264)
Q Consensus 160 ~~~~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~ 239 (264)
.++++||||||||||||++|++++|+++|++||+++.+.|+..+.++|||||||||++|+++|+++++|||+||||||||
T Consensus 182 ~~~iiIAYEPvWAIGTG~~as~~~i~~~~~~Ir~~l~~~~~~~~~~v~ILYGGSV~~~N~~~i~~~~~vDG~LVGgASL~ 261 (275)
T 3kxq_A 182 AENIIIAYEPVWAVGTGNTATSADVAEVHAFIHHKMHSRFGDEGAKIRLLYGGSVKPSNAFELLSTAHVNGALIGGASLK 261 (275)
T ss_dssp TTTEEEEECCCC--------CHHHHHHHHHHHHHHHHHHHHHHHTTSCEEECSCCCTTTHHHHHTSTTCCEEEESGGGSS
T ss_pred CCCEEEEECCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHCCCCCCEEEECHHHCC
T ss_conf 35349987774224789999809999999999999998713224781099707899879999956889897993256579
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 89999999999999
Q gi|254780197|r 240 HELFLKIVEIVERV 253 (264)
Q Consensus 240 ~~~F~~Ii~~~~~~ 253 (264)
+++|++|++.++|+
T Consensus 262 ~e~F~~Ii~~~~k~ 275 (275)
T 3kxq_A 262 AIDFLTICDVYRKL 275 (275)
T ss_dssp HHHHHHHHGGGGC-
T ss_pred HHHHHHHHHHHHHC
T ss_conf 89999999999649
No 2
>3krs_A Triosephosphate isomerase; ssgcid, SBRI, emerald biostructures, university of washington, NIH, niaid, structural genomics; 1.55A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=0 Score=643.38 Aligned_cols=247 Identities=35% Similarity=0.554 Sum_probs=232.4
Q ss_pred CCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCCC---CCHHHHHCCCCCCCCCC
Q ss_conf 988850699864656899999999999952223457711999689655999999732576---31022201222333433
Q gi|254780197|r 2 KVGIRPLVVGNWKMHGLRLSLERIQKIVEGIRRNSCCIDVAICPPATLIYESSRLCKTSS---VIIGAQDCHIAEYGPYT 78 (264)
Q Consensus 2 ~~~mK~iIigNWKMN~~~~~~~~~~~~~~~~~~~~~~veivi~Pp~~~L~~~~~~~~~s~---I~igAQnv~~~~~GA~T 78 (264)
.|+|||||+||||||++..++..|.+.+.... ..++++++|||++||..+.+.+++++ |.+|||||++.+.||||
T Consensus 21 ~M~rk~~IagNWKMN~~~~~~~~~~~~l~~~~--~~~~~v~i~Pp~~~l~~~~~~l~~~~~~~i~lGAQnvs~~~~GAfT 98 (271)
T 3krs_A 21 SMSRKYFVGGNFKCNGTKESLKTLIDSFKQVE--SSNSEVYVFPTSLHISLVKEFFGNDHPGVFKIGSQNISCTGNGAFT 98 (271)
T ss_dssp --CCCCEEEEECCBCCCHHHHHHHHHHHTTCC--CCSSEEEEECCGGGHHHHHHHHCSSSCSCEEECBSCCCSSCSBSCT
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHHHHHHCCC--CCCCCEEEECCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCC
T ss_conf 78688278881222689999999999976336--6899699989877899999998415775136762324456798874
Q ss_pred CCCCHHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCC
Q ss_conf 21206777540731001042000221357999999999999833474799816552033349800011100222100000
Q gi|254780197|r 79 GDISANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEF 158 (264)
Q Consensus 79 GeiSa~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~ 158 (264)
||||+.||+|+||+||||||||||.+|+|||++|++|+.+|+++||+||+||||++++|+.+++.+++.+|+...+.++.
T Consensus 99 GEISa~mLkd~G~~yvIIGHSERR~~f~Etd~~V~~Kv~~al~~gl~pI~CIGEt~~er~~g~~~~vv~~Ql~~~~~~~~ 178 (271)
T 3krs_A 99 GEVSCEMLKDMDVDCSLVGHSERRQYYSETDQIVNNKVKKGLENGLKIVLCIGESLSERETGKTNDVIQKQLTEALKDVS 178 (271)
T ss_dssp TCCCHHHHHHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHTTTCC
T ss_pred CCCCHHHHHHHCCCEEEECCHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 52449999982789699645142024677789999999999873880899946706764213288899999999860756
Q ss_pred CCCCCEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHH-HCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHH
Q ss_conf 01341132051353045576431124554467999999633224-16430886277898789999668989688974343
Q gi|254780197|r 159 KSSVPVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEE-GQKMRILYGGSVDVANAEDFSLIENIDGLLVGGAS 237 (264)
Q Consensus 159 ~~~~~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~-~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~AS 237 (264)
..+++|||||||||||||++|+|++++++|.+||+++.++|+.. ++++|||||||||++|+++|+++++|||+||||||
T Consensus 179 ~~~~iiIAYEPvWAIGTG~~as~~~i~~~~~~Ir~~l~~~~~~~~a~~i~ILYGGSV~~~Na~~l~~~~~vDG~LVGgAS 258 (271)
T 3krs_A 179 DLSNLVIAYEPIWAIGTGVVATPGQAQEAHAFIREYVTRMYNPQVSSNLRIIYGGSVTPDNCNELIKCADIDGFLVGGAS 258 (271)
T ss_dssp CCTTEEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHSCHHHHHHCCEEECSCCCTTTHHHHHHSTTCCEEEESGGG
T ss_pred CHHCEEEEECCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHCCCCCEEECCCCCHHHHHHHHCCCCCCEEEEEHHH
T ss_conf 50058998386001478999998999999999999999983731226764886488898799999668898978851054
Q ss_pred CCHHHHHHHHHHHH
Q ss_conf 58899999999999
Q gi|254780197|r 238 LQHELFLKIVEIVE 251 (264)
Q Consensus 238 l~~~~F~~Ii~~~~ 251 (264)
||+ +|++||+.++
T Consensus 259 L~~-~F~~Ii~~a~ 271 (271)
T 3krs_A 259 LKP-TFAKIIESAQ 271 (271)
T ss_dssp GST-THHHHHHHTC
T ss_pred CCH-HHHHHHHHCC
T ss_conf 798-9999999549
No 3
>3gvg_A Triosephosphate isomerase; cytoplasm, gluconeogenesis, glycolysis, pentose shunt, structural genomics; 1.55A {Mycobacterium tuberculosis}
Probab=100.00 E-value=0 Score=636.71 Aligned_cols=249 Identities=37% Similarity=0.588 Sum_probs=230.1
Q ss_pred CCCCEEEEEEECCCCCHHHHHHHHHHHHH-CCC-CCCCCEEEEECCHHHHHHHHHHHCCC--CCCHHHHHCCCCCCCCCC
Q ss_conf 88850699864656899999999999952-223-45771199968965599999973257--631022201222333433
Q gi|254780197|r 3 VGIRPLVVGNWKMHGLRLSLERIQKIVEG-IRR-NSCCIDVAICPPATLIYESSRLCKTS--SVIIGAQDCHIAEYGPYT 78 (264)
Q Consensus 3 ~~mK~iIigNWKMN~~~~~~~~~~~~~~~-~~~-~~~~veivi~Pp~~~L~~~~~~~~~s--~I~igAQnv~~~~~GA~T 78 (264)
|+||||||||||||++..+...|.+.+.. ... ...++++++|||++||..+++.++++ +|.+|||||++.+.||||
T Consensus 23 ~~rKkiIigNWKMn~~~~~~~~~~~~l~~~~~~~~~~~v~v~i~Pp~~~L~~~~~~l~~~~~~I~iGAQnvs~~~~Ga~T 102 (283)
T 3gvg_A 23 VSRKPLIAGNWKMNLNHYEAIALVQKIAFSLPDKYYDRVDVAVIPPFTDLRSVQTLVDGDKLRLTYGAQDLSPHDSGAYT 102 (283)
T ss_dssp -CCCCEEEEECCBCCCHHHHHHHHHHHHHHSCGGGGGTCEEEEECCGGGHHHHHHHHHHTTCSCEEEESCCCSSSSBSCT
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCEEEECCEECCCCCCC
T ss_conf 45884899975868799999999999987562245688589997988999999999743677601000020202589873
Q ss_pred CCCCHHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCC
Q ss_conf 21206777540731001042000221357999999999999833474799816552033349800011100222100000
Q gi|254780197|r 79 GDISANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEF 158 (264)
Q Consensus 79 GeiSa~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~ 158 (264)
||||+.||+|+||+||||||||||.+|+|||++|++|+.+|++++|+||+||||++++|+.+++.+++.+||...+.++.
T Consensus 103 GeISa~mLkd~G~~yvIIGHSERR~~~~Etd~~i~~Kv~~al~~~l~pIlCIGEt~~ere~g~~~~~l~~Ql~~~l~~~~ 182 (283)
T 3gvg_A 103 GDVSGAFLAKLGCSYVVVGHSERRTYHNEDDALVAAKAATALKHGLTPIVCIGEHLDVREAGNHVAHNIEQLRGSLAGLL 182 (283)
T ss_dssp TCCCHHHHHHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHTTTCC
T ss_pred CCCCHHHHHHHCCCEEEECCHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCHHHHHHHHHHHHHHHCC
T ss_conf 13149999861995899554677764499718899999999976874599845327666526508899999999985101
Q ss_pred --CCCCCEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHH-HCCCEEEECCCCCHHHHHHHHCCCCCCEEEECH
Q ss_conf --01341132051353045576431124554467999999633224-164308862778987899996689896889743
Q gi|254780197|r 159 --KSSVPVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEE-GQKMRILYGGSVDVANAEDFSLIENIDGLLVGG 235 (264)
Q Consensus 159 --~~~~~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~-~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ 235 (264)
..+++|||||||||||||++|++++|+++|++||++|.++++.. ++++|||||||||++|+++|+++++|||+||||
T Consensus 183 ~~~~~~iiIAYEPVWAIGTG~~as~~~i~~~~~~Ir~~l~~~~~~~~a~~v~ILYGGSV~~~N~~~l~~~~~vDG~LVGg 262 (283)
T 3gvg_A 183 AEQIGSVVIAYEPVWAIGTGRVASAADAQEVCAAIRKELASLASPRIADTVRVLYGGSVNAKNVGDIVAQDDVDGGLVGG 262 (283)
T ss_dssp HHHHTTCEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHSCHHHHTTCCEEECSCCCTTTHHHHHTSTTCCEEEECG
T ss_pred CCCCCCEEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHCCCCCEEECCCCCHHHHHHHHCCCCCCEEEECH
T ss_conf 00136189995662121789899868999999999999999728545277758954888986999995688988588315
Q ss_pred HHCCHHHHHHHHHHHH
Q ss_conf 4358899999999999
Q gi|254780197|r 236 ASLQHELFLKIVEIVE 251 (264)
Q Consensus 236 ASl~~~~F~~Ii~~~~ 251 (264)
||||+++|++|++++.
T Consensus 263 ASL~~e~F~~Ii~~a~ 278 (283)
T 3gvg_A 263 ASLDGEHFATLAAIAA 278 (283)
T ss_dssp GGGSHHHHHHHHHHHH
T ss_pred HHCCHHHHHHHHHHHH
T ss_conf 6568799999999970
No 4
>1tre_A Triosephosphate isomerase; intramolecular oxidoreductase; 2.60A {Escherichia coli} SCOP: c.1.1.1 PDB: 1tmh_A
Probab=100.00 E-value=0 Score=635.54 Aligned_cols=251 Identities=37% Similarity=0.608 Sum_probs=235.9
Q ss_pred CCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCH
Q ss_conf 88506998646568999999999999522234577119996896559999997325763102220122233343321206
Q gi|254780197|r 4 GIRPLVVGNWKMHGLRLSLERIQKIVEGIRRNSCCIDVAICPPATLIYESSRLCKTSSVIIGAQDCHIAEYGPYTGDISA 83 (264)
Q Consensus 4 ~mK~iIigNWKMN~~~~~~~~~~~~~~~~~~~~~~veivi~Pp~~~L~~~~~~~~~s~I~igAQnv~~~~~GA~TGeiSa 83 (264)
|||||||||||||++..+...|.+.+........++++++|||++||..+.+.+++++|.+||||||+.+.||||||||+
T Consensus 1 MrkkiIi~NWKMn~~~~~~~~~~~~l~~~~~~~~~~~v~i~Pp~~~l~~~~~~~~~~~i~vgAQn~~~~~~GA~TGeISa 80 (255)
T 1tre_A 1 MRHPLVMGNWKLNGSRHMVHELVSNLRKELAGVAGCAVAIAPPEMYIDMAKREAEGSHIMLGAQNVNLNLSGAFTGETSA 80 (255)
T ss_dssp CCCCEEEEECCBCCCHHHHHHHHHHHHHHHTTCCSCEEEEECCTTTHHHHHHHHTTSSEEEEESCCCSCSSBSCTTCCCH
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCH
T ss_conf 99888999844378999999999999874566689769994988899999998358983697134612378986462669
Q ss_pred HHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCC--CCC
Q ss_conf 777540731001042000221357999999999999833474799816552033349800011100222100000--013
Q gi|254780197|r 84 NMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEF--KSS 161 (264)
Q Consensus 84 ~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~--~~~ 161 (264)
.||+|+||+||||||||||.+|+|||++|++|+++++++||+||+||||++++|+.+++.+++.+||+.+++++. +.+
T Consensus 81 ~mLkd~g~~~viiGHSERR~~~~Et~~~i~~Kv~~al~~gl~pI~CIGE~~~~r~~~~~~~~l~~Ql~~~~~~~~~~~~~ 160 (255)
T 1tre_A 81 AMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFE 160 (255)
T ss_dssp HHHHHHTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHCGGGGT
T ss_pred HHHHHCCCCEEEECCHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHH
T ss_conf 99986399679864533225689983999999988986477549995653877636871649999999987416665540
Q ss_pred CCEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCHH
Q ss_conf 41132051353045576431124554467999999633224164308862778987899996689896889743435889
Q gi|254780197|r 162 VPVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQHE 241 (264)
Q Consensus 162 ~~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~~ 241 (264)
+++|||||+||||||++|+|++++++|.+||+++.+.+...++++|||||||||++|+++|+++|+|||+||||||||++
T Consensus 161 ~iiIAYEPvWAIGTG~~a~~~~i~~~~~~ir~~l~~~~~~~~~~v~ilYGGSV~~~N~~~i~~~~~vDG~LVG~ASL~~~ 240 (255)
T 1tre_A 161 GAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHIAKVDANIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKAD 240 (255)
T ss_dssp TCEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECSCCCTTTHHHHHTSTTCCEEEESGGGGCHH
T ss_pred CCEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCHH
T ss_conf 50688664765068989981889999999999986223543487219974867886999996677998699535446888
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999999
Q gi|254780197|r 242 LFLKIVEIVERVY 254 (264)
Q Consensus 242 ~F~~Ii~~~~~~~ 254 (264)
+|.+||++++++.
T Consensus 241 ~F~~Ii~~~~~~~ 253 (255)
T 1tre_A 241 AFAVIVKAAEAAK 253 (255)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999751
No 5
>2dp3_A Triosephosphate isomerase; enzyme, alpha/beta barrel; 2.10A {Giardia intestinalis}
Probab=100.00 E-value=0 Score=634.18 Aligned_cols=248 Identities=35% Similarity=0.527 Sum_probs=233.2
Q ss_pred CCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCHH
Q ss_conf 85069986465689999999999995222345771199968965599999973257631022201222333433212067
Q gi|254780197|r 5 IRPLVVGNWKMHGLRLSLERIQKIVEGIRRNSCCIDVAICPPATLIYESSRLCKTSSVIIGAQDCHIAEYGPYTGDISAN 84 (264)
Q Consensus 5 mK~iIigNWKMN~~~~~~~~~~~~~~~~~~~~~~veivi~Pp~~~L~~~~~~~~~s~I~igAQnv~~~~~GA~TGeiSa~ 84 (264)
|||||+||||||++..++..|.+.+.... .+.++++++|||++||..+.+.+++++|.+|||||++.+.||||||||+.
T Consensus 4 RK~~IiaNWKmn~~~~~~~~~~~~l~~~~-~~~~~~v~i~P~~~~l~~~~~~~~~~~i~vgaQn~~~~~~Ga~TGeiSa~ 82 (257)
T 2dp3_A 4 RRPFIGGNFKCNGSLDFIKSHVAAIAAHK-IPDSVDVVIAPSAVHLSTAIAANTSKQLRIAAQNVYLEGNGAWTGETSVE 82 (257)
T ss_dssp CCCEEEEECCSCCCHHHHHHHHHHHHTSC-CCTTSEEEEECCGGGHHHHHHHCCCSSCEEEESCCCSSCSSSCTTCCCHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHCCC-CCCCCEEEEECCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHH
T ss_conf 98689998644789999999999997178-88997699959888999999983589973887425556799881402899
Q ss_pred HHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCC----CC
Q ss_conf 77540731001042000221357999999999999833474799816552033349800011100222100000----01
Q gi|254780197|r 85 MLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEF----KS 160 (264)
Q Consensus 85 mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~----~~ 160 (264)
||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|+.+.+.+++.+|+...+.++. ..
T Consensus 83 mL~d~g~~~viiGHSERR~~f~Etd~~i~~Kv~~al~~~l~pIlCIGEt~~~r~~~~t~~v~~~Ql~~~l~~v~~~~~~~ 162 (257)
T 2dp3_A 83 MLQDMGLKHVIVGHSERRRIMGETDEQSAKKAKRALEKGMTVIFCVGETLDERKANRTMEVNIAQLEALGKELGESKMLW 162 (257)
T ss_dssp HHHHTTCCEEEECCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHTTCGGGG
T ss_pred HHHHHCCCEEEECCHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHH
T ss_conf 99971788799645888876399728999999999987996999816307777538807999999999984276303302
Q ss_pred CCCEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHH-HCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCC
Q ss_conf 341132051353045576431124554467999999633224-1643088627789878999966898968897434358
Q gi|254780197|r 161 SVPVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEE-GQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQ 239 (264)
Q Consensus 161 ~~~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~-~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~ 239 (264)
+++|||||||||||||++|+|++++++|++||+++.+.|+.. ++++|||||||||++|+++|+++++|||+||||||||
T Consensus 163 ~~iiIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~~i~iLYGGSV~~~N~~~i~~~~~vDG~LVGgASL~ 242 (257)
T 2dp3_A 163 KEVVIAYEPVWSIGTGVVATPEQAEEVHVGLRKWFVEKVAAEGAQHIRIIYGGSANGSNCEKLGQCPNIDGFLVGGASLK 242 (257)
T ss_dssp GGEEEEECCGGGTTTSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSEEEEESSCCTTTHHHHHTSTTCCEEEESGGGGS
T ss_pred CCEEEEECCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHCCCCCCEEEEEHHHCC
T ss_conf 35799967685157898898699999999999999875005452863099678889879999957889886995015359
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 899999999999999
Q gi|254780197|r 240 HELFLKIVEIVERVY 254 (264)
Q Consensus 240 ~~~F~~Ii~~~~~~~ 254 (264)
+| |.+||++++++.
T Consensus 243 ~e-f~~ii~i~~~~k 256 (257)
T 2dp3_A 243 PE-FMTMIDILTKTR 256 (257)
T ss_dssp TH-HHHHHHHHHHHC
T ss_pred HH-HHHHHHHHHHHC
T ss_conf 66-999999998637
No 6
>1yya_A Triosephosphate isomerase; riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.60A {Thermus thermophilus HB8}
Probab=100.00 E-value=0 Score=632.37 Aligned_cols=246 Identities=38% Similarity=0.575 Sum_probs=231.9
Q ss_pred CCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCH
Q ss_conf 88506998646568999999999999522234577119996896559999997325763102220122233343321206
Q gi|254780197|r 4 GIRPLVVGNWKMHGLRLSLERIQKIVEGIRRNSCCIDVAICPPATLIYESSRLCKTSSVIIGAQDCHIAEYGPYTGDISA 83 (264)
Q Consensus 4 ~mK~iIigNWKMN~~~~~~~~~~~~~~~~~~~~~~veivi~Pp~~~L~~~~~~~~~s~I~igAQnv~~~~~GA~TGeiSa 83 (264)
|+||||+||||||++..+...|.+.+..... ..+.++++|||++||..+++.+++++|.+||||||+++.||||||||+
T Consensus 1 Mrk~iI~~NWKmn~~~~~~~~~~~~l~~~~~-~~~~~v~i~P~~~~l~~~~~~~~~~~i~igaQn~~~~~~Ga~TGeiSa 79 (250)
T 1yya_A 1 MRRVLVAGNWKMHKTPSEARVWFAELKRLLP-PLQSEAAVLPAFPILPVAKEVLAETQVGYGAQDVSAHKEGAYTGEVSA 79 (250)
T ss_dssp CCCCEEEEECCBCCCHHHHHHHHHHHHHHCC-CCSSEEEEECCGGGHHHHHHHHTTSSCEEEESCCCSSSSBSCTTCCCH
T ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHHHHCC-CCCCCEEEECCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCH
T ss_conf 9988899962257999999999999986478-657888998984579999987445675574452343468877562368
Q ss_pred HHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCC--CCC
Q ss_conf 777540731001042000221357999999999999833474799816552033349800011100222100000--013
Q gi|254780197|r 84 NMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEF--KSS 161 (264)
Q Consensus 84 ~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~--~~~ 161 (264)
.||+|+||+||||||||||++|+|||++|++|+++|+++||+||+||||++++|+.+.+.+++.+||...+.++. ..+
T Consensus 80 ~mLkd~G~~yviiGHSERR~~f~Etde~I~~K~~~al~~~l~pIlCIGE~~~er~~~~~~~~l~~Ql~~~l~~v~~~~~~ 159 (250)
T 1yya_A 80 RMLSDLGCRYAIVGHSERRRYHGETDALVAEKAKRLLEEGITPILCVGEPLEVREKGEAVPYTLRQLRGSLEGVEPPGPE 159 (250)
T ss_dssp HHHHHTTCSEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHTTTCCCSSGG
T ss_pred HHHHHCCCEEEEECCHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHCCCCHHHHHHHHHHHHHCCCHHHHH
T ss_conf 99986098289844578775159970889999999997799589993776999973883789999999987036555530
Q ss_pred CCEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHH-HCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCH
Q ss_conf 41132051353045576431124554467999999633224-16430886277898789999668989688974343588
Q gi|254780197|r 162 VPVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEE-GQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQH 240 (264)
Q Consensus 162 ~~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~-~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~ 240 (264)
+++||||||||||||++|+|++++++|.+||+.+.+.|++. ++++||||||||+++|+++|+++++|||+||||||||+
T Consensus 160 ~iiIAYEPvWAIGtg~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~~v~ilYGGSV~~~N~~~i~~~~~vDG~LVG~ASl~~ 239 (250)
T 1yya_A 160 ALVIAYEPVWAIGTGKNATPEDAEAMHQAIRKALSERYGEAFASRVRILYGGSVNPKNFADLLSMPNVDGGLVGGASLEL 239 (250)
T ss_dssp GCEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHHCHHHHTTCEEEEESSCCTTTHHHHHTSTTCCEEEESGGGSSH
T ss_pred CEEEEECCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCH
T ss_conf 61787442440278988986899999999999999851142237763896288898699998567899868842565788
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999999
Q gi|254780197|r 241 ELFLKIVEIV 250 (264)
Q Consensus 241 ~~F~~Ii~~~ 250 (264)
++|++|++++
T Consensus 240 ~~F~~Ii~~a 249 (250)
T 1yya_A 240 ESFLALLRIA 249 (250)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHC
T ss_conf 9999999964
No 7
>1o5x_A TIM, triosephosphate isomerase; 2- phosphoglycerate, META-phosphate, catalytic LOOP6; HET: 2PG; 1.10A {Plasmodium falciparum} SCOP: c.1.1.1 PDB: 1lzo_A 1m7o_A* 1m7p_A* 1lyx_A* 1ydv_A 2vfi_A* 2vfh_A* 2vff_A 2vfg_A* 1vga_A 1woa_A* 1wob_A 2vfd_A 2vfe_A*
Probab=100.00 E-value=0 Score=632.92 Aligned_cols=246 Identities=31% Similarity=0.529 Sum_probs=232.9
Q ss_pred CCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCC
Q ss_conf 88850699864656899999999999952223457711999689655999999732576310222012223334332120
Q gi|254780197|r 3 VGIRPLVVGNWKMHGLRLSLERIQKIVEGIRRNSCCIDVAICPPATLIYESSRLCKTSSVIIGAQDCHIAEYGPYTGDIS 82 (264)
Q Consensus 3 ~~mK~iIigNWKMN~~~~~~~~~~~~~~~~~~~~~~veivi~Pp~~~L~~~~~~~~~s~I~igAQnv~~~~~GA~TGeiS 82 (264)
|+|||+|+||||||++.+++..|.+.+......+.++++++|||+++|..+.+.. ++++.+||||||+.+.||||||||
T Consensus 1 M~rk~~Ii~NWKMn~~~~~~~~~~~~~~~~~~~~~~~~vvi~P~~~~l~~~~~~~-~~~i~~gAQn~~~~~~GA~TGeiS 79 (248)
T 1o5x_A 1 MARKYFVAANWKCNGTLESIKSLTNSFNNLDFDPSKLDVVVFPVSVHYDHTRKLL-QSKFSTGIQNVSKFGNGSYTGEVS 79 (248)
T ss_dssp --CCEEEEEECCBCCCHHHHHHHHHHHHTSCCCTTTEEEEEECCGGGHHHHHHHS-CTTSEEEESCCCSSCSBSCTTCCC
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHH-CCCCEEEECCCCCCCCCCCCCCCC
T ss_conf 9998589996323699999999999987457787787799979889999999985-177707600100005788735156
Q ss_pred HHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCCCCCC
Q ss_conf 67775407310010420002213579999999999998334747998165520333498000111002221000000134
Q gi|254780197|r 83 ANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEFKSSV 162 (264)
Q Consensus 83 a~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~~~~~ 162 (264)
+.||+|+||+||||||||||.+|+|||++|++|+++|+++||+||+||||++++|+.+++.+++.+|+...+.+....++
T Consensus 80 a~mL~d~G~~~viIGHSERR~~~~Etd~~I~~Kv~~al~~gl~pI~CIGE~~~~r~~~~~~~~~~~Ql~~~l~~~~~~~~ 159 (248)
T 1o5x_A 80 AEIAKDLNIEYVIIGHFERRKYFHETDEDVREKLQASLKNNLKAVVCFGESLEQREQNKTIEVITKQVKAFVDLIDNFDN 159 (248)
T ss_dssp HHHHHHTTCCEEEECCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHTTGGGCCCTTS
T ss_pred HHHHHHCCCCEEEECCHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCE
T ss_conf 99999759989997546767543998389999999999879959999567521333464546999999987502245031
Q ss_pred CEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHH-HCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCHH
Q ss_conf 1132051353045576431124554467999999633224-164308862778987899996689896889743435889
Q gi|254780197|r 163 PVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEE-GQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQHE 241 (264)
Q Consensus 163 ~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~-~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~~ 241 (264)
++||||||||||||++|+|++++++|.+||+++.++|+.. ++++|||||||||++|+++|+++++|||+|||||||+ +
T Consensus 160 iiIAYEPvWAIGtG~~a~~~~i~e~~~~Ir~~l~~~~~~~~~~~v~ILYGGSV~~~N~~~i~~~~~iDG~LVGgASL~-~ 238 (248)
T 1o5x_A 160 VILVYEPLWAIGTGKTATPEQAQLVHKEIRKIVKDTCGEKQANQIRILYGGSVNTENCSSLIQQEDIDGFLVGNASLK-E 238 (248)
T ss_dssp EEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSEEEECSCCCTTTHHHHHTSTTCCEEEECGGGGS-T
T ss_pred EEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHCCCCCCEEEEECHHCC-H
T ss_conf 899967676416899899899999999999999986236452774099668999879999856889896896023088-8
Q ss_pred HHHHHHHHH
Q ss_conf 999999999
Q gi|254780197|r 242 LFLKIVEIV 250 (264)
Q Consensus 242 ~F~~Ii~~~ 250 (264)
+|++||+.+
T Consensus 239 ~F~~Ii~~a 247 (248)
T 1o5x_A 239 SFVDIIKSA 247 (248)
T ss_dssp THHHHHHHT
T ss_pred HHHHHHHHH
T ss_conf 999999985
No 8
>2vxn_A Triosephosphate isomerase; fatty acid biosynthesis, transition state analogue, glycolysis, pentose shunt, gluconeogenesis, TIM, PGH; HET: PGH PGA; 0.82A {Leishmania mexicana} PDB: 1if2_A* 1qds_A 1n55_A* 1amk_A 1tpf_A 1iig_A 1ag1_O* 1iih_A 1tpd_A 1trd_A* 2v5l_A 4tim_A* 5tim_A 6tim_A*
Probab=100.00 E-value=0 Score=630.80 Aligned_cols=247 Identities=34% Similarity=0.570 Sum_probs=232.4
Q ss_pred CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCC
Q ss_conf 99888506998646568999999999999522234577119996896559999997325763102220122233343321
Q gi|254780197|r 1 MKVGIRPLVVGNWKMHGLRLSLERIQKIVEGIRRNSCCIDVAICPPATLIYESSRLCKTSSVIIGAQDCHIAEYGPYTGD 80 (264)
Q Consensus 1 m~~~mK~iIigNWKMN~~~~~~~~~~~~~~~~~~~~~~veivi~Pp~~~L~~~~~~~~~s~I~igAQnv~~~~~GA~TGe 80 (264)
|++..||||+||||||++..+...|.+.+..... ..++++++|||++||..+++.++++++.+|||||++ ++||||||
T Consensus 1 m~~~~kpiI~aNWKMn~~~~~~~~~~~~~~~~~~-~~~~~vvi~Pp~~~l~~~~~~~~~~~i~igaQn~~~-~~GA~TGe 78 (251)
T 2vxn_A 1 MSAKPQPIAAANWKCNGTTASIEKLVQVFNEHTI-SHDVQCVVAPTFVHIPLVQAKLRNPKYVISAQNAIA-KSGAFTGE 78 (251)
T ss_dssp --CCCCCEEEEECCSCCCHHHHHHHHHHHHHSCC-CSCCEEEEECCGGGHHHHHHHCCCTTEEEEESCCBS-SCSSCTTC
T ss_pred CCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCC-CCCCEEEEECCHHHHHHHHHHHCCCCCEEHHHCCCC-CCCCCCCC
T ss_conf 9999986899951347999999999999863478-899769997988889999997437736646334898-89887352
Q ss_pred CCHHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCC--
Q ss_conf 206777540731001042000221357999999999999833474799816552033349800011100222100000--
Q gi|254780197|r 81 ISANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEF-- 158 (264)
Q Consensus 81 iSa~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~-- 158 (264)
||+.||+|+||+||||||||||++|+|||++|++|+.+|+++||+||+||||++++|+.+.+.+++.+|+...+.++.
T Consensus 79 iSa~mLkd~G~~yviIGHSERR~~f~Etd~~i~~K~~~al~~gl~pI~CIGE~~~~~~~~~~~~~~~~Ql~~~l~~~~~~ 158 (251)
T 2vxn_A 79 VSMPILKDIGVHWVILGHSERRTYYGETDEIVAQKVSEACKQGFMVIACIGETLQQREANQTAKVVLSQTSAIAAKLTKD 158 (251)
T ss_dssp CBHHHHHHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHTTCCTG
T ss_pred CCHHHHHHCCCCEEEECCHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHCCCCHHHHHHHHHHHHHCCCHH
T ss_conf 46999998399878854478776517742889999999998799689994641887763770246899999987448712
Q ss_pred CCCCCEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHH-HCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHH
Q ss_conf 01341132051353045576431124554467999999633224-16430886277898789999668989688974343
Q gi|254780197|r 159 KSSVPVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEE-GQKMRILYGGSVDVANAEDFSLIENIDGLLVGGAS 237 (264)
Q Consensus 159 ~~~~~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~-~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~AS 237 (264)
..+++|||||||||||||++|+|++++++|.+||+++.++|+.. ++++|||||||||++|+++|+++++|||+||||||
T Consensus 159 ~~~~iiIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~~i~iLYGGSV~~~N~~~i~~~~~vDG~LVGgAS 238 (251)
T 2vxn_A 159 AWNQVVLAYEPVWAIGTGKVATPEQAQEVHLLLRKWVSENIGTDVAAKLRILYGGSVNAANAATLYAKPDINGFLVGGAS 238 (251)
T ss_dssp GGGGEEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCEEEEESSCCTTTHHHHHTSTTCCEEEESGGG
T ss_pred HCCEEEEEECCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHCCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHH
T ss_conf 20306998566762068988998999999999999998760620137610896788887799999568898968852154
Q ss_pred CCHHHHHHHHHHH
Q ss_conf 5889999999999
Q gi|254780197|r 238 LQHELFLKIVEIV 250 (264)
Q Consensus 238 l~~~~F~~Ii~~~ 250 (264)
||+| |++||+.+
T Consensus 239 l~~e-F~~Ii~~~ 250 (251)
T 2vxn_A 239 LKPE-FRDIIDAT 250 (251)
T ss_dssp GSTT-HHHHHHTT
T ss_pred CCHH-HHHHHHHH
T ss_conf 5878-99999961
No 9
>1b9b_A TIM, protein (triosephosphate isomerase); thermophilic; 2.85A {Thermotoga maritima} SCOP: c.1.1.1
Probab=100.00 E-value=0 Score=630.96 Aligned_cols=250 Identities=36% Similarity=0.644 Sum_probs=234.6
Q ss_pred CCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCC
Q ss_conf 88850699864656899999999999952223457711999689655999999732576310222012223334332120
Q gi|254780197|r 3 VGIRPLVVGNWKMHGLRLSLERIQKIVEGIRRNSCCIDVAICPPATLIYESSRLCKTSSVIIGAQDCHIAEYGPYTGDIS 82 (264)
Q Consensus 3 ~~mK~iIigNWKMN~~~~~~~~~~~~~~~~~~~~~~veivi~Pp~~~L~~~~~~~~~s~I~igAQnv~~~~~GA~TGeiS 82 (264)
|++||||+||||||++..+...|.+.+....+...++++++|||++||..+.+.+++++|.+|||||++++.||||||||
T Consensus 1 m~rk~iI~~NWKmn~~~~~~~~~~~~~~~~~~~~~~~~vii~Pp~~~l~~~~~~~~~~~i~igaQn~~~~~~GA~TGeiS 80 (255)
T 1b9b_A 1 ITRKLILAGNWKMHKTISEAKKFVSLLVNELHDVKEFEIVVCPPFTALSEVGEILSGRNIKLGAQNVFYEDQGAFTGEIS 80 (255)
T ss_dssp -CCSCEEEEECCBCCCHHHHHHHHHHHHHHTSSCCSSEEEEECCGGGHHHHHHHHTTSSSEEEESCCCSSSSBSCTTCCC
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCC
T ss_conf 99885899950347999999999999986377767976999799999999999854998358652201357886636258
Q ss_pred HHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCC--CC
Q ss_conf 6777540731001042000221357999999999999833474799816552033349800011100222100000--01
Q gi|254780197|r 83 ANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEF--KS 160 (264)
Q Consensus 83 a~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~--~~ 160 (264)
+.||+|+||+||||||||||++|+|||++|++|+++|+++||+||+||||++++|+++.+.+++.+|+...+.+.. ..
T Consensus 81 a~mLkd~G~~yviiGHSERR~~~~Etd~~I~~Kv~~al~~~l~pIlCIGE~~~~~e~~~~~~~l~~Ql~~~l~~~~~~~~ 160 (255)
T 1b9b_A 81 PLMLQEIGVEYVIVGHSERRRIFKEDDEFINRKVKAVLEKGMTPILCVGETLEEREKGLTFCVVEKQVREGFYGLDKEEA 160 (255)
T ss_dssp HHHHHTTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHHTCHHHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHCCHHHHH
T ss_conf 99999839978985150015657998799999999999879969999376266565178799999999998743413310
Q ss_pred CCCEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCH-HHCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCC
Q ss_conf 34113205135304557643112455446799999963322-41643088627789878999966898968897434358
Q gi|254780197|r 161 SVPVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPE-EGQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQ 239 (264)
Q Consensus 161 ~~~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~-~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~ 239 (264)
+++||||||+||||||++|++++++++|.+||+.+.++|+. .+.++|||||||||++|+.+|+++++|||+||||||||
T Consensus 161 ~~iiIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~~v~iLYGGSV~~~N~~~i~~~~~iDG~LVG~ASL~ 240 (255)
T 1b9b_A 161 KRVVIAYEPVWAIGTGRVATPQQAQEVHAFIRKLLSEMYDEETAGSIRILYGGSIKPDNFLGLIVQKDIDGGLVGGASLK 240 (255)
T ss_dssp TTCEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHSCHHHHHHSEEEEESSCCHHHHTTTSSSTTCCEEEESGGGTS
T ss_pred CCEEEEECCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCCEEEECCHHCC
T ss_conf 45899835455116898888388999999999999986171103653189888898758999856889997886222078
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 89999999999999
Q gi|254780197|r 240 HELFLKIVEIVERV 253 (264)
Q Consensus 240 ~~~F~~Ii~~~~~~ 253 (264)
++|.+|+++++.+
T Consensus 241 -~~F~~I~~~~~~~ 253 (255)
T 1b9b_A 241 -ESFIELARIMRGV 253 (255)
T ss_dssp -THHHHHHHHHTC-
T ss_pred -HHHHHHHHHHHHH
T ss_conf -7899999999974
No 10
>1mo0_A TIM, triosephosphate isomerase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; 1.70A {Caenorhabditis elegans} SCOP: c.1.1.1
Probab=100.00 E-value=0 Score=629.89 Aligned_cols=251 Identities=35% Similarity=0.596 Sum_probs=235.1
Q ss_pred CCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCC
Q ss_conf 98885069986465689999999999995222345771199968965599999973257631022201222333433212
Q gi|254780197|r 2 KVGIRPLVVGNWKMHGLRLSLERIQKIVEGIRRNSCCIDVAICPPATLIYESSRLCKTSSVIIGAQDCHIAEYGPYTGDI 81 (264)
Q Consensus 2 ~~~mK~iIigNWKMN~~~~~~~~~~~~~~~~~~~~~~veivi~Pp~~~L~~~~~~~~~s~I~igAQnv~~~~~GA~TGei 81 (264)
.|+||+||+||||||++..++..+.+.+..... ..++++++|||++||..+.+.++ ++|.+|||||++++.|||||||
T Consensus 20 ~m~rK~iIagNWKMN~~~~~~~~~~~~l~~~~~-~~~~~ivI~Pp~~~L~~v~~~l~-s~I~iGAQnvs~~~~GA~TGev 97 (275)
T 1mo0_A 20 GLTRKFFVGGNWKMNGDYASVDGIVTFLNASAD-NSSVDVVVAPPAPYLAYAKSKLK-AGVLVAAQNCYKVPKGAFTGEI 97 (275)
T ss_dssp CSCSCEEEEEECCBCCCHHHHHHHHHHHHHSCC-CTTEEEEEECCGGGHHHHHHHSC-TTEEEEESCCCSSSSBSCTTCC
T ss_pred CCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCC-CCCCEEEEECCHHHHHHHHHHHC-CCCEEEEECCEECCCCCCCCCC
T ss_conf 898981899963748699999999999871477-78974999899889999999735-7877875012001577420205
Q ss_pred CHHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCCCCC
Q ss_conf 06777540731001042000221357999999999999833474799816552033349800011100222100000013
Q gi|254780197|r 82 SANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEFKSS 161 (264)
Q Consensus 82 Sa~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~~~~ 161 (264)
|+.||+|+||+||||||||||++|+|+|++|++|++++++++|+||+||||++++|+.+++.+++.+|+...+.+....+
T Consensus 98 Sa~mLkd~G~~yviIGHSERR~~~~Etd~~i~~K~~~al~~~l~pI~CIGE~~~~~~~~~~~~~l~~Q~~~~~~~~~~~~ 177 (275)
T 1mo0_A 98 SPAMIKDLGLEWVILGHSERRHVFGESDALIAEKTVHALEAGIKVVFCIGEKLEEREAGHTKDVNFRQLQAIVDKGVSWE 177 (275)
T ss_dssp CHHHHHHTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHTTTCCST
T ss_pred CHHHHHHCCCCEEEECCHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHCHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 89999980998899735888865599708999999999875880899966718876130177779999998751244556
Q ss_pred CCEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHH-HCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCH
Q ss_conf 41132051353045576431124554467999999633224-16430886277898789999668989688974343588
Q gi|254780197|r 162 VPVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEE-GQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQH 240 (264)
Q Consensus 162 ~~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~-~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~ 240 (264)
++|||||||||||||++|++++|+++|++||+++.+.|+.. ++++|||||||||++|+++|+++++|||+||||||||+
T Consensus 178 ~iiIAYEPvWAIGtG~~a~~e~i~~~~~~Ir~~l~~~~~~~~~~~v~ILYGGSVn~~N~~~i~~~~~vDG~LVGgASLd~ 257 (275)
T 1mo0_A 178 NIVIAYEPVWAIGTGKTASGEQAQEVHEWIRAFLKEKVSPAVADATRIIYGGSVTADNAAELGKKPDIDGFLVGGASLKP 257 (275)
T ss_dssp TEEEEECCGGGTTTSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSCEEEESSCCTTTHHHHTTSTTCCEEEESGGGGST
T ss_pred CEEEEECCEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEECCCCCHHHHHHHHCCCCCCEEEEEHHHCCH
T ss_conf 61898776441378998998999999999999999860986618553895689898799999568898869940475686
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 999999999999999
Q gi|254780197|r 241 ELFLKIVEIVERVYV 255 (264)
Q Consensus 241 ~~F~~Ii~~~~~~~~ 255 (264)
+ |++||+++.+...
T Consensus 258 e-F~~Ii~~~~~~~~ 271 (275)
T 1mo0_A 258 D-FVKIINARSTALS 271 (275)
T ss_dssp H-HHHHHHHHSCC--
T ss_pred H-HHHHHHHHHHHHC
T ss_conf 6-9999999999853
No 11
>1aw2_A Triosephosphate isomerase; psychrophilic, vibrio marinus; 2.65A {Moritella marina} SCOP: c.1.1.1 PDB: 1aw1_A
Probab=100.00 E-value=0 Score=627.66 Aligned_cols=251 Identities=35% Similarity=0.591 Sum_probs=234.0
Q ss_pred CCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHC--CCCCCHHHHHCCCCCCCCCCCCC
Q ss_conf 8850699864656899999999999952223457711999689655999999732--57631022201222333433212
Q gi|254780197|r 4 GIRPLVVGNWKMHGLRLSLERIQKIVEGIRRNSCCIDVAICPPATLIYESSRLCK--TSSVIIGAQDCHIAEYGPYTGDI 81 (264)
Q Consensus 4 ~mK~iIigNWKMN~~~~~~~~~~~~~~~~~~~~~~veivi~Pp~~~L~~~~~~~~--~s~I~igAQnv~~~~~GA~TGei 81 (264)
|||||||||||||++..+...|.+.+........++++++|||++||..+...+. +++|.+||||||+++.|||||||
T Consensus 1 MrkkiIi~NWKMn~~~~~~~~~~~~l~~~~~~~~~~~ivi~Pp~~~L~~~~~~~~~~~~~i~~gAQn~~~~~~Ga~TGei 80 (256)
T 1aw2_A 1 MRHPVVMGNWKLNGSKEMVVDLLNGLNAELEGVTGVDVAVAPPALFVDLAERTLTEAGSAIILGAQNTDLNNSGAFTGDM 80 (256)
T ss_dssp -CCCEEEEECCBCCCHHHHHHHHHHHHHHTTTCCSSEEEEECCGGGHHHHHHHHHHHTCCCEEEESCCCSCSSBSCTTCC
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCC
T ss_conf 99889999833479999999999999875677789769998998899999999741699516841312224689875654
Q ss_pred CHHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCC--C
Q ss_conf 06777540731001042000221357999999999999833474799816552033349800011100222100000--0
Q gi|254780197|r 82 SANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEF--K 159 (264)
Q Consensus 82 Sa~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~--~ 159 (264)
|+.||+|+||+||||||||||.+|+|||++|++|+++|+++||+||+||||++++|+.+++.+++.+|+...+.... .
T Consensus 81 Sa~mL~d~G~~~viiGHSERR~~~~E~d~~i~~Kv~~al~~~l~pI~CVGE~~~~~~~~~~~~~~~~Ql~~~~~~~~~~~ 160 (256)
T 1aw2_A 81 SPAMLKEFGATHIIIGHSERREYHAESDEFVAKKFAFLKENGLTPVLCIGESDAQNEAGETMAVCARQLDAVINTQGVEA 160 (256)
T ss_dssp CHHHHHHHTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHHTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHCGGG
T ss_pred CHHHHHHCCCCEEEECCHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCCHHHHHHHHHHHHHCCCCCHH
T ss_conf 69999876997899754342033799718899989999976980699955720210357647789999998860266101
Q ss_pred CCCCEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCC
Q ss_conf 13411320513530455764311245544679999996332241643088627789878999966898968897434358
Q gi|254780197|r 160 SSVPVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQ 239 (264)
Q Consensus 160 ~~~~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~ 239 (264)
.++++|||||+||||||++|++++++++|.+||+++.+.++..++++|||||||||++|+++|+++|+|||+|||||||+
T Consensus 161 ~~~iiIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~v~ilYGGSV~~~N~~~i~~~~~vDG~LVG~aSl~ 240 (256)
T 1aw2_A 161 LEGAIIAYEPIWAIGTGKAATAEDAQRIHAQIRAHIAEKSEAVAKNVVIQYGGSVKPENAAAYFAQPDIDGALVGGAALD 240 (256)
T ss_dssp GTTCEEEECCTTTTTSSCCCCHHHHHHHHHHHHHHHHTTCHHHHHHCEEEECSCCCTTTHHHHTTSTTCCEEEESGGGGC
T ss_pred CCCEEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHCCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCC
T ss_conf 04608997756650789899858799999999999985244441773099668889879999966899887996268659
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 899999999999999
Q gi|254780197|r 240 HELFLKIVEIVERVY 254 (264)
Q Consensus 240 ~~~F~~Ii~~~~~~~ 254 (264)
+++|.+||+++.+++
T Consensus 241 ~~~F~~Ii~~~~~~~ 255 (256)
T 1aw2_A 241 AKSFAAIAKAAAEAK 255 (256)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHC
T ss_conf 899999999999744
No 12
>2btm_A TIM, protein (triosephosphate isomerase); thermophilic triose-phosphate, glycolysis; 2.40A {Geobacillus stearothermophilus} SCOP: c.1.1.1 PDB: 1btm_A
Probab=100.00 E-value=0 Score=628.69 Aligned_cols=248 Identities=38% Similarity=0.607 Sum_probs=234.0
Q ss_pred CCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCHH
Q ss_conf 85069986465689999999999995222345771199968965599999973257631022201222333433212067
Q gi|254780197|r 5 IRPLVVGNWKMHGLRLSLERIQKIVEGIRRNSCCIDVAICPPATLIYESSRLCKTSSVIIGAQDCHIAEYGPYTGDISAN 84 (264)
Q Consensus 5 mK~iIigNWKMN~~~~~~~~~~~~~~~~~~~~~~veivi~Pp~~~L~~~~~~~~~s~I~igAQnv~~~~~GA~TGeiSa~ 84 (264)
||||||||||||++..+...|.+.+.......+++++++|||++||..+.+.+++++|.+|||||++.+.||||||||+.
T Consensus 1 Rk~iIiaNWKmN~~~~~~~~~~~~l~~~~~~~~~~~ivi~pp~~~L~~~~~~~~~~~i~vgaQn~~~~~~GA~TGeiSa~ 80 (252)
T 2btm_A 1 RKPIIAGNWKMNGTLAEAVQFVEDVKGHVPPADEVISVVCAPFLFLDRLVQAADGTDLKIGAQTMHFADQGAYTGEVSPV 80 (252)
T ss_dssp CCCEEEEECCBCCCHHHHHHHHHHHTTTSCCTTTCEEEEEECGGGHHHHHHHHTTSSEEEEESCCCSSSSBSCTTCCCHH
T ss_pred CCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHH
T ss_conf 97099995224899999999999998447987872899979999999999983389975970411244678776746899
Q ss_pred HHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCC--CCCC
Q ss_conf 77540731001042000221357999999999999833474799816552033349800011100222100000--0134
Q gi|254780197|r 85 MLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEF--KSSV 162 (264)
Q Consensus 85 mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~--~~~~ 162 (264)
||+|+||+||||||||||++|+|+|++|++|+++++++||+||+||||++++|+.+.+.+++.+|+...+.++. ..++
T Consensus 81 mLkd~G~~yviIGHSERR~~~~E~~~~i~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~~~~ql~~~l~~~~~~~~~~ 160 (252)
T 2btm_A 81 MLKDLGVTYVILGHSERRQMFAETDETVNKKVLAAFTRGLIPIICCGESLEEREAGQTNAVVASQVEKALAGLTPEQVKQ 160 (252)
T ss_dssp HHHHHTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHHTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHTTCCHHHHTT
T ss_pred HHHHCCCCEEEECCHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHCCCCCCHHHHHHHHHHHHHCCCHHHCCE
T ss_conf 99983997899667888855499879999999999877990699965621420247514479999999984686444031
Q ss_pred CEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCH-HHCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCHH
Q ss_conf 113205135304557643112455446799999963322-4164308862778987899996689896889743435889
Q gi|254780197|r 163 PVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPE-EGQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQHE 241 (264)
Q Consensus 163 ~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~-~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~~ 241 (264)
+|||||||||||||++|+|++|+++|.+||+++.++|+. .++++||||||||+|+|+++|+++++|||+|||||||+++
T Consensus 161 iiIAYEPvWAIGtG~~a~~~~i~e~~~~Ir~~l~~~~~~~~~~~i~ilYGGSV~~~N~~~i~~~~~vDG~LVG~ASl~~~ 240 (252)
T 2btm_A 161 AVIAYEPIWAIGTGKSSTPEDANSVCGHIRSVVSRLFGPEAAEAIRIQYGGSVKPDNIRDFLAQQQIDGALVGGASLEPA 240 (252)
T ss_dssp CEEEECCGGGTTTSCCCCHHHHHHHHHHHHHHHHHHHCHHHHTTSEEEEESSCCTTTHHHHHTSTTCCEEEESGGGSSHH
T ss_pred EEEEECCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHCCCCCEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCHH
T ss_conf 89997645403689989858899999999999999818201256618981778860599995689988588435656889
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999999
Q gi|254780197|r 242 LFLKIVEIVER 252 (264)
Q Consensus 242 ~F~~Ii~~~~~ 252 (264)
+|.+||+++++
T Consensus 241 ~F~~Ii~a~~~ 251 (252)
T 2btm_A 241 SFLQLVEAGRH 251 (252)
T ss_dssp HHHHHHHTTC-
T ss_pred HHHHHHHHHCC
T ss_conf 99999998605
No 13
>1ney_A TIM, triosephosphate isomerase; yeast, DHAP, dihydroxyacetone phosphate, michaelis complex; HET: FTR 13P; 1.20A {Saccharomyces cerevisiae} SCOP: c.1.1.1 PDB: 1nf0_A* 1i45_A* 1ypi_A 2ypi_A 7tim_A* 3ypi_A*
Probab=100.00 E-value=0 Score=630.63 Aligned_cols=244 Identities=39% Similarity=0.624 Sum_probs=232.0
Q ss_pred CCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCH
Q ss_conf 88506998646568999999999999522234577119996896559999997325763102220122233343321206
Q gi|254780197|r 4 GIRPLVVGNWKMHGLRLSLERIQKIVEGIRRNSCCIDVAICPPATLIYESSRLCKTSSVIIGAQDCHIAEYGPYTGDISA 83 (264)
Q Consensus 4 ~mK~iIigNWKMN~~~~~~~~~~~~~~~~~~~~~~veivi~Pp~~~L~~~~~~~~~s~I~igAQnv~~~~~GA~TGeiSa 83 (264)
.|||+|+||||||++..++..|.+.+..... +.++++++|||++||..+++.+++++|.+|||||++++.||||||||+
T Consensus 1 ~rk~~I~gNWKMn~~~~~~~~~~~~~~~~~~-~~~~~v~i~Pp~~~L~~~~~~~~~~~i~igaQn~s~~~~GA~TGeISa 79 (247)
T 1ney_A 1 ARTFFVGGNFKLNGSKQSIKEIVERLNTASI-PENVEVVICPPATYLDYSVSLVKKPQVTVGAQNAYLKASGAFTGENSV 79 (247)
T ss_dssp CCCEEEEEECCBCCCHHHHHHHHHHHHHSCC-CTTEEEEEECCGGGHHHHHHHCCCTTEEEEESCCCSSSSBSCTTCCCH
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHCCCC-CCCCEEEEECCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCHHHH
T ss_conf 9983897736125999999999999971488-999759997998899999998368984683245644568886034439
Q ss_pred HHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCCCCCCC
Q ss_conf 77754073100104200022135799999999999983347479981655203334980001110022210000001341
Q gi|254780197|r 84 NMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEFKSSVP 163 (264)
Q Consensus 84 ~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~~~~~~ 163 (264)
.||+|+||+||||||||||.+|+|||+.|++|+++|+++||+||+||||++++|+.+++.+++.+|+..+++++...+++
T Consensus 80 ~mLkd~g~~yviIGHSERR~~f~Etd~~i~~K~~~al~~~l~pIlCVGE~l~~r~~~~~~~~l~~Ql~~~l~~~~~~~~i 159 (247)
T 1ney_A 80 DQIKDVGAKYVILGHSERRSYFHEDDKFIADKTKFALGQGVGVILCIGETLEEKKAGKTLDVVERQLNAVLEEVKDFTNV 159 (247)
T ss_dssp HHHHHTTCCEEEESCHHHHHTTCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHCCCCTTE
T ss_pred HHHHHCCCCEEEECCHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCCE
T ss_conf 99998199489966588886559983888999999997699689994750998863883789999999997066642556
Q ss_pred EEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHH-HCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCHHH
Q ss_conf 132051353045576431124554467999999633224-1643088627789878999966898968897434358899
Q gi|254780197|r 164 VIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEE-GQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQHEL 242 (264)
Q Consensus 164 iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~-~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~~~ 242 (264)
||||||+||||||++|+|++++++|++||+++.+.|++. ++++|||||||||++|+++|+++++|||+||||||||+|
T Consensus 160 iIAYEPvWAIGtG~~as~~~i~e~~~~Ir~~l~~~~~~~~~~~i~iLYGGSV~~~N~~~i~~~~~iDG~LVG~ASl~~e- 238 (247)
T 1ney_A 160 VVAYEPVXAIGTGLAATPEDAQDIHASIRKFLASKLGDKAASELRILYGGSANGSNAVTFKDKADVDGFLVGGASLKPE- 238 (247)
T ss_dssp EEEECCGGGTTTSCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCCEEEESSCCTTTGGGGTTCTTCCEEEESGGGGSTH-
T ss_pred EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCHH-
T ss_conf 9997661045689889989999999999999987404101477618877888977999995688999589403757858-
Q ss_pred HHHHHHH
Q ss_conf 9999999
Q gi|254780197|r 243 FLKIVEI 249 (264)
Q Consensus 243 F~~Ii~~ 249 (264)
|++||++
T Consensus 239 F~~Ii~~ 245 (247)
T 1ney_A 239 FVDIINS 245 (247)
T ss_dssp HHHHHTT
T ss_pred HHHHHHC
T ss_conf 9999845
No 14
>2i9e_A Triosephosphate isomerase; 2.00A {Tenebrio molitor}
Probab=100.00 E-value=0 Score=628.42 Aligned_cols=248 Identities=37% Similarity=0.569 Sum_probs=232.2
Q ss_pred CCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCC
Q ss_conf 88850699864656899999999999952223457711999689655999999732576310222012223334332120
Q gi|254780197|r 3 VGIRPLVVGNWKMHGLRLSLERIQKIVEGIRRNSCCIDVAICPPATLIYESSRLCKTSSVIIGAQDCHIAEYGPYTGDIS 82 (264)
Q Consensus 3 ~~mK~iIigNWKMN~~~~~~~~~~~~~~~~~~~~~~veivi~Pp~~~L~~~~~~~~~s~I~igAQnv~~~~~GA~TGeiS 82 (264)
|.|||||+||||||++..++..|.+.+..... ..++++++|||++||..+.... +++|.+|||||++.+.||||||||
T Consensus 1 M~rk~iI~~NWKmn~~~~~~~~~~~~l~~~~~-~~~~~i~i~P~~~~l~~~~~~~-~~~i~igaQn~~~~~~Ga~TGeIS 78 (259)
T 2i9e_A 1 MARKFVVGGNWKMNGDKKQINEIIGFLKSGPL-NQDTEVVVGVPAIYLELVRTCV-PASIGVAAQNCYKVPKGAFTGEIS 78 (259)
T ss_dssp -CCCEEEEEECCBCCCHHHHHHHHHHHHHSCC-CTTEEEEEEECGGGHHHHHHHS-CTTSEEEESCCCSSSSBSCTTCCC
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHCCC-CCCCEEEEECCHHHHHHHHHHC-CCCEEECEEEEEECCCCCCCCCCC
T ss_conf 99971899966236799999999999970777-8997699979988999999741-377004407743037987725045
Q ss_pred HHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCCCCCC
Q ss_conf 67775407310010420002213579999999999998334747998165520333498000111002221000000134
Q gi|254780197|r 83 ANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEFKSSV 162 (264)
Q Consensus 83 a~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~~~~~ 162 (264)
+.||+|+||+||||||||||.+|+|||+.|++|+.+|+++||+||+||||++++|+.+++.+++.+|+..++.++.+.++
T Consensus 79 a~mL~d~G~~~vIIGHSERR~~f~Etn~~I~~K~~~al~~~l~pI~CIGE~~~~r~~~~~~~~l~~Ql~~~~~~~~~~~~ 158 (259)
T 2i9e_A 79 PAMIKDVGADWVILGHSERRQIFGESDELIAEKVCHALESGLKVIACIGETLEEREAGKTEEVVFRQTKAIAAKVNDWSN 158 (259)
T ss_dssp HHHHHHTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHCSCCTT
T ss_pred HHHHHHCCCCEEEECCHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHEECCCCHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999729988996356653235899499999999999879979999276243000576899999999987516553372
Q ss_pred CEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHH-HCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCHH
Q ss_conf 1132051353045576431124554467999999633224-164308862778987899996689896889743435889
Q gi|254780197|r 163 PVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEE-GQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQHE 241 (264)
Q Consensus 163 ~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~-~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~~ 241 (264)
+||||||+||||||++|++++++++|.+||+++.+.++.. ++++|||||||||++|+++|+++++|||+||||||||++
T Consensus 159 iiIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~~v~ILYGGSVn~~N~~~i~~~~~vDG~LVG~ASL~~e 238 (259)
T 2i9e_A 159 VVIAYEPVWAIGTGKTATPQQAQDVHKALRQWICENIDAKVGNSIRIQYGGSVTAANCKELASQPDIDGFLVGGASLKPE 238 (259)
T ss_dssp EEEEECCGGGTTSSSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCEEEECSCCCTTTHHHHHTSTTCCEEEESGGGGSTH
T ss_pred EEEEECCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHCCCCCEEECCCCCHHHHHHHHCCCCCCEEEEEHHHCCHH
T ss_conf 79997865414789999848999999999999998627544166638973887874899995678988689602657989
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999999999
Q gi|254780197|r 242 LFLKIVEIVERV 253 (264)
Q Consensus 242 ~F~~Ii~~~~~~ 253 (264)
|++||++.+.+
T Consensus 239 -F~~Ii~~~~~~ 249 (259)
T 2i9e_A 239 -FVDIINARQLV 249 (259)
T ss_dssp -HHHHHTTTC--
T ss_pred -HHHHHHHHHHH
T ss_conf -99999999865
No 15
>2j27_A Triosephosphate isomerase glycosomal; TIM, 2PG, LOOP7, glycosome, TIM-barrel, gluconeogenesis, lipid synthesis, atomic resolution; 1.15A {Trypanosoma brucei brucei} PDB: 2j24_A 1kv5_A 1tpe_A 1tsi_A* 3tim_A 2v2c_A 2v0t_A 1tri_A 1tti_A 1mss_A 1ttj_A* 2wsq_A 1ml1_A 2wsr_A 2v2h_A 2v2d_A 1dkw_A 2vei_A 2vek_A* 2vel_A ...
Probab=100.00 E-value=0 Score=625.69 Aligned_cols=244 Identities=32% Similarity=0.542 Sum_probs=228.9
Q ss_pred CCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCH
Q ss_conf 88506998646568999999999999522234577119996896559999997325763102220122233343321206
Q gi|254780197|r 4 GIRPLVVGNWKMHGLRLSLERIQKIVEGIRRNSCCIDVAICPPATLIYESSRLCKTSSVIIGAQDCHIAEYGPYTGDISA 83 (264)
Q Consensus 4 ~mK~iIigNWKMN~~~~~~~~~~~~~~~~~~~~~~veivi~Pp~~~L~~~~~~~~~s~I~igAQnv~~~~~GA~TGeiSa 83 (264)
.|||||+||||||++..+...|.+.+..... ..++++++|||++||..+.+.++++++.+|||||++ +.||||||||+
T Consensus 3 ~~k~iI~aNWKmn~~~~~~~~~~~~~~~~~~-~~~~~vvi~Pp~~~L~~~~~~~~~~~i~~gaQn~~~-~~GA~TGeISa 80 (250)
T 2j27_A 3 KPQPIAAANWKCNGSQQSLSELIDLFNSTSI-NHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNAIA-KSGAFTGEVSL 80 (250)
T ss_dssp CCCCEEEEECCBCCCHHHHHHHHHHHHTCCC-CSCCEEEEECCGGGHHHHHHHCCCTTEEEEESCCBS-SCBSCTTCCBH
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHCCC-CCCEEEEECCCHHHHHHHHHHHCCCCCEECCCCCCC-CCCCCCCCCCH
T ss_conf 9983899971117799999999999870578-999089968988889999987448705561401668-89987341359
Q ss_pred HHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCC--CCC
Q ss_conf 777540731001042000221357999999999999833474799816552033349800011100222100000--013
Q gi|254780197|r 84 NMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEF--KSS 161 (264)
Q Consensus 84 ~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~--~~~ 161 (264)
.||+|+||+||||||||||.+|+|||++|++|+.+|+++||+||+||||++++|+.+++.+++.+||...+.++. ..+
T Consensus 81 ~mLkd~G~~yvIIGHSERR~~f~Etd~~V~~K~~~al~~~l~pI~CIGE~~~~r~~~~~~~~l~~Ql~~~l~~~~~~~~~ 160 (250)
T 2j27_A 81 PILKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACIGETLQERESGRTAVVVLTQIAAIAKKLKKADWA 160 (250)
T ss_dssp HHHHHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHHTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHTCCGGGGG
T ss_pred HHHHHHCCCCEEECCHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHCCCHHHHHHHHHHHHHCCCHHHHH
T ss_conf 99998187804544687774269972999899999998699379994640776661760567999999997006354430
Q ss_pred CCEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHH-HCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCH
Q ss_conf 41132051353045576431124554467999999633224-16430886277898789999668989688974343588
Q gi|254780197|r 162 VPVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEE-GQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQH 240 (264)
Q Consensus 162 ~~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~-~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~ 240 (264)
++||||||+||||||++|+|++|+++|.+||+++.++|+.. ++++|||||||||++|+++|+++++|||+||||||||+
T Consensus 161 ~iiIAYEPvWAIGtG~~as~~~i~~~~~~Ir~~l~~~~~~~~~~~i~ilYGGSV~~~N~~~i~~~~~vDG~LVGgASl~~ 240 (250)
T 2j27_A 161 KVVIAYEAVWAIGTGKVATPQQAQEAHALIRSWVSSKIGADVAGELRILYGGSVNGKNARTLYQQRDVNGFLVGGASLKP 240 (250)
T ss_dssp GEEEEEECGGGTTSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCCEEEESSCCTTTHHHHHTSTTCCEEEESGGGGST
T ss_pred CEEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHCCCCCEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCH
T ss_conf 44899776544278988981879999999999999971742417874895689898799999678999968843364687
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999999
Q gi|254780197|r 241 ELFLKIVEIV 250 (264)
Q Consensus 241 ~~F~~Ii~~~ 250 (264)
+ |++||+..
T Consensus 241 e-F~~Ii~~~ 249 (250)
T 2j27_A 241 E-FVDIIKAT 249 (250)
T ss_dssp T-HHHHHHTT
T ss_pred H-HHHHHHHC
T ss_conf 9-99999854
No 16
>1r2r_A TIM, triosephosphate isomerase; closed loop conformation in the ligand-free state, conformational heterogeneity, TIM-barrel; 1.50A {Oryctolagus cuniculus} SCOP: c.1.1.1 PDB: 1r2s_A 1r2t_A 2jk2_A 1wyi_A 1hti_A 2vom_A 1tph_1* 8tim_A 1sw3_A 1spq_A 1tpb_1* 1tpw_A* 1sw7_A 1tpu_A* 1tpc_1* 1ssd_A 1ssg_A 1sw0_A 1sq7_A 1tpv_A* ...
Probab=100.00 E-value=0 Score=618.36 Aligned_cols=246 Identities=35% Similarity=0.568 Sum_probs=230.0
Q ss_pred CCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCC
Q ss_conf 98885069986465689999999999995222345771199968965599999973257631022201222333433212
Q gi|254780197|r 2 KVGIRPLVVGNWKMHGLRLSLERIQKIVEGIRRNSCCIDVAICPPATLIYESSRLCKTSSVIIGAQDCHIAEYGPYTGDI 81 (264)
Q Consensus 2 ~~~mK~iIigNWKMN~~~~~~~~~~~~~~~~~~~~~~veivi~Pp~~~L~~~~~~~~~s~I~igAQnv~~~~~GA~TGei 81 (264)
+.+|||+|+||||||++..+...|.+.+.... .+.++++++|||++||..+... .+++|.+||||||+.+.|||||||
T Consensus 1 ~~~rK~~I~~NWKmn~~~~~~~~~~~~l~~~~-~~~~~~v~i~Pp~~~l~~~~~~-~~~~i~igaQn~~~~~~GA~TGei 78 (248)
T 1r2r_A 1 APSRKFFVGGNWKMNGRKKNLGELITTLNAAK-VPADTEVVCAPPTAYIDFARQK-LDPKIAVAAQNCYKVTNGAFTGEI 78 (248)
T ss_dssp --CCCEEEEEECCBCCCHHHHHHHHHHHHHSC-CCTTEEEEEECCGGGHHHHHHH-SCTTSEEEESCCCSSSSBSCTTCC
T ss_pred CCCCCEEEEEECCCCCCHHHHHHHHHHHHHCC-CCCCCEEEEECCHHHHHHHHHH-HCCCCEEEEEECCCCCCCCCCCCC
T ss_conf 99998789884354789999999999987146-7899889997988999999986-489966987622121587663646
Q ss_pred CHHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCCCCC
Q ss_conf 06777540731001042000221357999999999999833474799816552033349800011100222100000013
Q gi|254780197|r 82 SANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEFKSS 161 (264)
Q Consensus 82 Sa~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~~~~ 161 (264)
|+.||+|+||+||||||||||++|+|||++|++|+++|+++||+||+||||++++|+.++|.+++.+|+..++.++...+
T Consensus 79 S~~mL~d~G~~~viiGHSERR~~~~Etd~~i~~K~~~al~~gl~pIlCIGE~~~e~~~~~~~~~l~~Ql~~~l~~~~~~~ 158 (248)
T 1r2r_A 79 SPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALSEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWS 158 (248)
T ss_dssp CHHHHHHTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHTCSCGG
T ss_pred CHHHHHHCCCCEEEECCHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHCCCHHHHHHHHHHHHHHCCCCCC
T ss_conf 89999986998899653887755399839999999999977975999955407655056589999999998860365323
Q ss_pred CCEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHH-HCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCH
Q ss_conf 41132051353045576431124554467999999633224-16430886277898789999668989688974343588
Q gi|254780197|r 162 VPVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEE-GQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQH 240 (264)
Q Consensus 162 ~~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~-~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~ 240 (264)
+++|||||+||||||++|+|++++++|.+||+.+.+.++.. ++++||||||||+++|+++|+++++|||+||||||||+
T Consensus 159 ~iiIAYEPvWAIGtG~~a~~~~i~~~~~~ir~~l~~~~~~~~~~~i~iLYGGSV~~~N~~~i~~~~~iDG~LVG~ASl~~ 238 (248)
T 1r2r_A 159 KVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLKP 238 (248)
T ss_dssp GEEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCCEEECSCCCTTTHHHHHTSTTCCEEEESGGGGST
T ss_pred EEEEEECCEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCEEEECCCCCHHHHHHHHCCCCCCEEEEEHHHCCH
T ss_conf 38999645750467998986999999999999999861386658650997478686289999567898979810786786
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999999
Q gi|254780197|r 241 ELFLKIVEIV 250 (264)
Q Consensus 241 ~~F~~Ii~~~ 250 (264)
| |++|+++.
T Consensus 239 e-F~~Ii~~~ 247 (248)
T 1r2r_A 239 E-FVDIINAK 247 (248)
T ss_dssp H-HHHHHTSC
T ss_pred H-HHHHHHHC
T ss_conf 8-99999745
No 17
>1m6j_A TIM, TPI, triosephosphate isomerase; asymmetry, monomer stability; 1.50A {Entamoeba histolytica} SCOP: c.1.1.1
Probab=100.00 E-value=0 Score=619.68 Aligned_cols=248 Identities=35% Similarity=0.562 Sum_probs=227.1
Q ss_pred CCCEEEEEEECCCCCHHHHHHHHHHHHHCC--CCCCCCEEEEECCHHHHHHHHHHH----CCCCCCHHHHHCCCCCCCCC
Q ss_conf 885069986465689999999999995222--345771199968965599999973----25763102220122233343
Q gi|254780197|r 4 GIRPLVVGNWKMHGLRLSLERIQKIVEGIR--RNSCCIDVAICPPATLIYESSRLC----KTSSVIIGAQDCHIAEYGPY 77 (264)
Q Consensus 4 ~mK~iIigNWKMN~~~~~~~~~~~~~~~~~--~~~~~veivi~Pp~~~L~~~~~~~----~~s~I~igAQnv~~~~~GA~ 77 (264)
.+|+||+||||||++..+...|.+.+.... ....++++++||||+||..+++.+ .++++.+|||||++ +.|||
T Consensus 3 ~~K~iI~gNWKMN~~~~~~~~~~~~l~~~~~~~~~~~~~vvi~Pp~~~L~~~~~~~~~~~~~~~i~~gaQn~~~-~~GA~ 81 (261)
T 1m6j_A 3 AGKFVVGGNWKCNGTLASIETLTKGVAASVDAELAKKVEVIVGVPFIYIPKVQQILAGEANGANILVSAENAWT-KSGAY 81 (261)
T ss_dssp CSCEEEEEECCBCCCHHHHHHHHHHHHHHCCHHHHTTEEEEEEECGGGHHHHHHHHHTSTTGGGEEEEESCCBS-SSBSC
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCEEEEHHHCCC-CCCCC
T ss_conf 99808998334478999999999999975523136887399979845299999998775048854651121134-67664
Q ss_pred CCCCCHHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCC
Q ss_conf 32120677754073100104200022135799999999999983347479981655203334980001110022210000
Q gi|254780197|r 78 TGDISANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSE 157 (264)
Q Consensus 78 TGeiSa~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~ 157 (264)
|||||+.||+|+||+||||||||||++|+|||++|++|++.|+++||+||+||||++++|+.+++.+++.+|+...+...
T Consensus 82 TGeiSa~mLkd~G~~yvIIGHSERR~~f~Etd~~I~~Kv~~al~~~l~pIlCIGE~leere~~~~~~~~~~Ql~~~~~~~ 161 (261)
T 1m6j_A 82 TGEVHVGMLVDCQVPYVILGHSERRQIFHESNEQVAEKVKVAIDAGLKVIACIGETEAQRIANQTEEVVAAQLKAINNAI 161 (261)
T ss_dssp TTCCBHHHHHHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHHTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCHHHHHHCCCCEEEECCHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHCCCHHHHHHHHHHHHHCCC
T ss_conf 35266999997198679852512101158984999999999998799489993651888872880779999999886358
Q ss_pred --CCCCCCEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHH-HCCCEEEECCCCCHHHHHHHHCCCCCCEEEEC
Q ss_conf --001341132051353045576431124554467999999633224-16430886277898789999668989688974
Q gi|254780197|r 158 --FKSSVPVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEE-GQKMRILYGGSVDVANAEDFSLIENIDGLLVG 234 (264)
Q Consensus 158 --~~~~~~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~-~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG 234 (264)
...+++|||||||||||||++|+|++++++|++||+++.+.++.. +.++|||||||||++|+++|+++++|||+|||
T Consensus 162 ~~~~~~~iiIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~~i~ilYGGSV~~~N~~~i~~~~~vDG~LVG 241 (261)
T 1m6j_A 162 SKEAWKNIILAYEPVWAIGTGKTATPDQAQEVHQYIRKWMTENISKEVAEATRIQYGGSVNPANCNELAKKADIDGFLVG 241 (261)
T ss_dssp CTGGGGGEEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSCEEECSCCCTTTHHHHHTSTTCCEEEES
T ss_pred CHHHHHCEEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCHHHCCCCCEEECCCCCHHHHHHHHCCCCCCEEEEE
T ss_conf 86665243677464763068988998999999999999998750333416773885388798699999578898858830
Q ss_pred HHHCCHHHHHHHHHHHHH
Q ss_conf 343588999999999999
Q gi|254780197|r 235 GASLQHELFLKIVEIVER 252 (264)
Q Consensus 235 ~ASl~~~~F~~Ii~~~~~ 252 (264)
|||||+++|.+|++.+.+
T Consensus 242 gASl~~~~F~~Ii~~~~~ 259 (261)
T 1m6j_A 242 GASLDAAKFKTIINSVSE 259 (261)
T ss_dssp GGGGSHHHHHHHHGGGGG
T ss_pred HHHCCHHHHHHHHHHHHH
T ss_conf 575687899999999983
No 18
>2v5b_A Triosephosphate isomerase; TIM, unfolding, monotctim, glycosome, gluconeogenesis, lipid synthesis, monomeric mutant, glycolysis, pentose shunt; 2.00A {Trypanosoma cruzi}
Probab=100.00 E-value=0 Score=594.85 Aligned_cols=240 Identities=36% Similarity=0.572 Sum_probs=222.9
Q ss_pred CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCC
Q ss_conf 99888506998646568999999999999522234577119996896559999997325763102220122233343321
Q gi|254780197|r 1 MKVGIRPLVVGNWKMHGLRLSLERIQKIVEGIRRNSCCIDVAICPPATLIYESSRLCKTSSVIIGAQDCHIAEYGPYTGD 80 (264)
Q Consensus 1 m~~~mK~iIigNWKMN~~~~~~~~~~~~~~~~~~~~~~veivi~Pp~~~L~~~~~~~~~s~I~igAQnv~~~~~GA~TGe 80 (264)
|++..||||+||||||++..++..|.+.+..... ..++++++|||++||..+.+.++++++.+|||||++++
T Consensus 1 m~~~~kpiIa~NWKMN~~~~~~~~~~~~l~~~~~-~~~~~v~i~Pp~~~l~~~~~~~~~~~i~igaQn~~~~~------- 72 (244)
T 2v5b_A 1 MASKPQPIAAANWKCNGSESLLVPLIETLNAATF-DHDVQCVVAPTFLHIPMTKARLTNPKFQIAAQNAGNAD------- 72 (244)
T ss_dssp --CCCCCEEEEEECC-----CCHHHHHHHHHCCC-CSCCEEEEEECGGGHHHHHHHCCCTTEEEEESCCCCHH-------
T ss_pred CCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCC-CCCCEEEEECCHHHHHHHHHHHCCCCEEEEEECCCCCC-------
T ss_conf 9999974899965327799999999999854067-89935999598888999998726777447873264324-------
Q ss_pred CCHHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCC--
Q ss_conf 206777540731001042000221357999999999999833474799816552033349800011100222100000--
Q gi|254780197|r 81 ISANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEF-- 158 (264)
Q Consensus 81 iSa~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~-- 158 (264)
|+.||+|+||+||||||||||++|+|||++|++|+++|+++||+||+||||++++|+.+++.+++.+|+...+.++.
T Consensus 73 -s~a~L~d~G~~yvIIGHSERR~~f~Etd~~I~~K~~~al~~gl~pIlCIGE~~~er~~g~t~~vl~~Ql~~~l~~~~~~ 151 (244)
T 2v5b_A 73 -ALASLKDYGISWVVLGHSERRLYYGETNEIVAEKVAQACAAGFHVIVCVGETNEEREAGRTAAVVLTQLAAVAQKLSKE 151 (244)
T ss_dssp -HHHHHHHTTCCEEEECCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHTTCCTG
T ss_pred -CHHHHHHCCCCEEEECCHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHCCCCCCCCHHHHHHHHHHHCCCCC
T ss_conf -4888987599789972478786539983999999999998699079996442330125774340799999987126610
Q ss_pred CCCCCEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHH-HCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHH
Q ss_conf 01341132051353045576431124554467999999633224-16430886277898789999668989688974343
Q gi|254780197|r 159 KSSVPVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEE-GQKMRILYGGSVDVANAEDFSLIENIDGLLVGGAS 237 (264)
Q Consensus 159 ~~~~~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~-~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~AS 237 (264)
..+++|||||||||||||++|+|++++++|.+||+++.+.|+.. ++++||||||||||+|+++|+++++|||+||||||
T Consensus 152 ~~~~iiIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~~i~iLYGGSV~~~N~~~i~~~~~vDG~LVGgAS 231 (244)
T 2v5b_A 152 AWSRVVIAYEPVWAIGTGKVATPQQAQEVHELLRRWVRSKLGTDIAAQLRILYGGSVTAKNARTLYQMRDINGFLVGGAS 231 (244)
T ss_dssp GGGGEEEEECCHHHHSSSCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCEEEECSCCCHHHHHHHHTSTTCCEEEESGGG
T ss_pred CCCCCEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHCCCCCCEEEECHHH
T ss_conf 00162899786442478999982789999999999999871844357741896688887489999668898968952164
Q ss_pred CCHHHHHHHHHHH
Q ss_conf 5889999999999
Q gi|254780197|r 238 LQHELFLKIVEIV 250 (264)
Q Consensus 238 l~~~~F~~Ii~~~ 250 (264)
||+| |++||+.+
T Consensus 232 L~~e-F~~Ii~~~ 243 (244)
T 2v5b_A 232 LKPE-FVEIIEAT 243 (244)
T ss_dssp SSTT-HHHHHHTT
T ss_pred CCHH-HHHHHHHH
T ss_conf 5889-99999970
No 19
>2jgq_A Triosephosphate isomerase; glycolysis, pentose shunt, gluconeogenesis, lipid synthesis, fatty acid biosynthesis; HET: QGA; 2.3A {Helicobacter pylori}
Probab=100.00 E-value=0 Score=562.49 Aligned_cols=231 Identities=28% Similarity=0.413 Sum_probs=201.5
Q ss_pred CEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf 50699864656899999999999952223457711999689655999999732576310222012223334332120677
Q gi|254780197|r 6 RPLVVGNWKMHGLRLSLERIQKIVEGIRRNSCCIDVAICPPATLIYESSRLCKTSSVIIGAQDCHIAEYGPYTGDISANM 85 (264)
Q Consensus 6 K~iIigNWKMN~~~~~~~~~~~~~~~~~~~~~~veivi~Pp~~~L~~~~~~~~~s~I~igAQnv~~~~~GA~TGeiSa~m 85 (264)
.|||+||||||++..+...|.+.+..........+|++||||++|... ...++.+|||||++++.||||||||+.|
T Consensus 1 tKiiiaNWKmn~~~~~~~~~l~~l~~~l~~~~~~~v~i~P~~~~l~~~----~~~~~~igaQn~~~~~~GA~TGevS~~m 76 (233)
T 2jgq_A 1 TKIAMANFKSAMPIFKSHAYLKELEKTLKPQHFDRVFVFPDFFGLLPN----SFLHFTLGVQNAYPRDCGAFTGEITSKH 76 (233)
T ss_dssp CCEEEEECTBCSCHHHHHHHHHHHHHHSCGGGTTTEEEECCTTTCCCS----CCSSSEECBSCCBSSSSBSCTTCCBHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHC----CCCCCEEEEEECCCCCCCCCCCCCCHHH
T ss_conf 978999877588989999999999986485678889995982898754----4669669988798877888856238999
Q ss_pred HHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCC-CCCCCE
Q ss_conf 7540731001042000221357999999999999833474799816552033349800011100222100000-013411
Q gi|254780197|r 86 LADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEF-KSSVPV 164 (264)
Q Consensus 86 L~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~-~~~~~i 164 (264)
|+|+||+||||||||||.+|+|+|++|++|+++|++++|+||+||||++++|+.+.+. +..|+...+.++. ...++|
T Consensus 77 Lkd~g~~~viiGHSERR~~~~E~d~~v~~K~~~a~~~~l~pI~CiGE~~~~~~~~~~~--~~~~l~~~l~~~~~~~~~ii 154 (233)
T 2jgq_A 77 LEELKIHTLLIGHSERRTLLKESPSFLKEKFDFFKSKNFKIVYCIGEELTTREKGFKA--VKEFLSEQLENIDLNYPNLV 154 (233)
T ss_dssp HHHTTCCEEEECCHHHHHTTCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHHCHHH--HHHHHHHHHTTSCTTCTTEE
T ss_pred HHHHCCCEEEECCHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHCCCHH--HHHHHHHHHHHCCCCCCCCC
T ss_conf 9971789799755888986599829999999999987996999837621223316305--99999999863100222222
Q ss_pred EEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCHHHHH
Q ss_conf 32051353045576431124554467999999633224164308862778987899996689896889743435889999
Q gi|254780197|r 165 IAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQHELFL 244 (264)
Q Consensus 165 IAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~~~F~ 244 (264)
|||||+||||||++|++++++++|.+||+.+. +++||||||||+++|+++|+++++|||+||||||||+++|.
T Consensus 155 IAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~~~-------~~~~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~~~F~ 227 (233)
T 2jgq_A 155 VAYEPIWAIGTKKSASLEDIYLTHGFLKQILN-------QKTPLLYGGSVNTQNAKEILGIDSVDGLLIGSASWELENFK 227 (233)
T ss_dssp EEECCGGGTTC--CCCHHHHHHHHHHHHHHSC-------TTSCEEEESSCCTTTHHHHHTSTTCCEEEESGGGGSHHHHH
T ss_pred CCCCCEECCCCCCCCCHHHHHHHHHHHHHHHC-------CCCCEEEECCCCHHHHHHHHCCCCCCEEEECHHHCCHHHHH
T ss_conf 46686331478998987899999999999972-------68858870789875999985788999789665876989999
Q ss_pred HHHHH
Q ss_conf 99999
Q gi|254780197|r 245 KIVEI 249 (264)
Q Consensus 245 ~Ii~~ 249 (264)
+||++
T Consensus 228 ~Ii~~ 232 (233)
T 2jgq_A 228 TIISF 232 (233)
T ss_dssp HHHTT
T ss_pred HHHHH
T ss_conf 99954
No 20
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii DSM2661}
Probab=100.00 E-value=0 Score=446.61 Aligned_cols=213 Identities=22% Similarity=0.268 Sum_probs=184.9
Q ss_pred EEEEEECCCCCH--HHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf 699864656899--999999999952223457711999689655999999732576310222012223334332120677
Q gi|254780197|r 8 LVVGNWKMHGLR--LSLERIQKIVEGIRRNSCCIDVAICPPATLIYESSRLCKTSSVIIGAQDCHIAEYGPYTGDISANM 85 (264)
Q Consensus 8 iIigNWKMN~~~--~~~~~~~~~~~~~~~~~~~veivi~Pp~~~L~~~~~~~~~s~I~igAQnv~~~~~GA~TGeiSa~m 85 (264)
||++|||||++. .....+.+.++.... ..++++++||||++|..+.+ ..++.+|||||++.+.||||||||+.|
T Consensus 2 iii~NwK~y~~~~~~~~~~la~~~~~~~~-~~~v~v~i~P~~~~L~~~~~---~~~i~vgaQn~~~~~~Ga~TGeis~~~ 77 (219)
T 2h6r_A 2 VIVINYKTYNESIGNRGLEIAKIAEKVSE-ESGITIGVAPQFVDLRMIVE---NVNIPVYAQHIDNINPGSHTGHILAEA 77 (219)
T ss_dssp CEEEECTTCGGGSTHHHHHHHHHHHHHHH-HHTCCEEEECCTTTHHHHHH---HCCSCBEESCCCSCCSBSCTTCCCHHH
T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHHCC-CCCCEEEEECCHHHHHHHHH---HCCCEEEEEECCCCCCCCCCCHHHHHH
T ss_conf 99998788857166699999999986033-58988999799999999995---189869940368656887510203999
Q ss_pred HHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCCCCCCCEE
Q ss_conf 75407310010420002213579999999999998334747998165520333498000111002221000000134113
Q gi|254780197|r 86 LADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEFKSSVPVI 165 (264)
Q Consensus 86 L~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~~~~~~iI 165 (264)
|+|+||+||||||||||.+|+|+|+.|++ ++++||+||+||||+.+++.. ...++++|
T Consensus 78 l~~~G~~~viiGHSErR~~~~e~~~~i~~----~~~~gl~~i~Cvge~~~~~~~------------------~~l~~~ii 135 (219)
T 2h6r_A 78 IKDCGCKGTLINHSEKRMLLADIEAVINK----CKNLGLETIVCTNNINTSKAV------------------AALSPDCI 135 (219)
T ss_dssp HHHHTCCEEEESBTTBCCBHHHHHHHHHH----HHHHTCEEEEEESSSHHHHHH------------------TTTCCSEE
T ss_pred HHHCCCCEEEECCHHHHHHHCCCHHHHHH----HHHCCCEEEEEECCHHHHHHH------------------HCCCCCEE
T ss_conf 99709978996432554443121163889----987899379984758886542------------------02577079
Q ss_pred EECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCHHHHHH
Q ss_conf 20513530455764311245544679999996332241643088627789878999966898968897434358899999
Q gi|254780197|r 166 AYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQHELFLK 245 (264)
Q Consensus 166 AYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~~~F~~ 245 (264)
||||+||||||++++++++++++..||.+.. .+.+++|||||||+++|..+++..+++||+|||||||++++|.+
T Consensus 136 AyEPvwaIGtg~~~~~~~~~~i~~~ir~i~~-----~~~~v~vlygGsV~~~n~~~~~~~~~vDG~LVG~aslka~~f~~ 210 (219)
T 2h6r_A 136 AVEPPELIGTGIPVSKANPEVVEGTVRAVKE-----INKDVKVLCGAGISKGEDVKAALDLGAEGVLLASGVVKAKNVEE 210 (219)
T ss_dssp EECCCC--------------CSHHHHHHHHH-----HCTTCEEEECSSCCSHHHHHHHHTTTCCCEEESHHHHTCSSHHH
T ss_pred EECCHHCCCCCCCCCHHHHHHHHHHHHHHHH-----HCCCCCEEECCCEECCHHHHHHHCCCCCEEEEEEEECCHHHHHH
T ss_conf 8666101557977885339999999999998-----62682023215540456799852479988996204447563999
Q ss_pred HHHHHH
Q ss_conf 999999
Q gi|254780197|r 246 IVEIVE 251 (264)
Q Consensus 246 Ii~~~~ 251 (264)
|++..-
T Consensus 211 ii~~l~ 216 (219)
T 2h6r_A 211 AIRELI 216 (219)
T ss_dssp HHHHHC
T ss_pred HHHHHH
T ss_conf 999999
No 21
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=100.00 E-value=0 Score=428.12 Aligned_cols=220 Identities=18% Similarity=0.178 Sum_probs=184.7
Q ss_pred CCCCCCEEEEEEECCCCCH--HHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCC
Q ss_conf 9988850699864656899--99999999995222345771199968965599999973257631022201222333433
Q gi|254780197|r 1 MKVGIRPLVVGNWKMHGLR--LSLERIQKIVEGIRRNSCCIDVAICPPATLIYESSRLCKTSSVIIGAQDCHIAEYGPYT 78 (264)
Q Consensus 1 m~~~mK~iIigNWKMN~~~--~~~~~~~~~~~~~~~~~~~veivi~Pp~~~L~~~~~~~~~s~I~igAQnv~~~~~GA~T 78 (264)
|..++||||+||||||++. .....+.+.+..... ..++++++|||+++|..+.+ ..++.+|||||++.+.||||
T Consensus 1 m~~mkkpiii~NwKm~~~~~~~~~~~~~~~~~~~~~-~~~~~i~i~P~~~~L~~~~~---~~~i~v~aQ~~~~~~~Ga~T 76 (225)
T 1hg3_A 1 MAKLKEPIIAINFKTYIEATGKRALEIAKAAEKVYK-ETGVTIVVAPQLVDLRMIAE---SVEIPVFAQHIDPIKPGSHT 76 (225)
T ss_dssp -CCCCSSEEEEECTBCGGGSHHHHHHHHHHHHHHHH-TTCCEEEEECCHHHHHHHHH---SCSSCBEESCCCSCCSBSCT
T ss_pred CCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCC-CCCCEEEEECCHHHHHHHHH---CCCCEEEEEECCCCCCCCCC
T ss_conf 987899789998786878627899999999986244-47988999799999999984---15970787112346788603
Q ss_pred CCCCHHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCC
Q ss_conf 21206777540731001042000221357999999999999833474799816552033349800011100222100000
Q gi|254780197|r 79 GDISANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEF 158 (264)
Q Consensus 79 GeiSa~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~ 158 (264)
||+|+.||+|+||+|+||||||||.+|+|+++.++ +++++||.||+|+||+.+.+.. .
T Consensus 77 Geis~~~l~~~G~~~vliGHSErR~~~~e~~~~i~----~a~~~gl~~i~cv~e~~~~~~~------------------~ 134 (225)
T 1hg3_A 77 GHVLPEAVKEAGAVGTLLNHSENRMILADLEAAIR----RAEEVGLMTMVCSNNPAVSAAV------------------A 134 (225)
T ss_dssp TCCCHHHHHHTTCCEEEESCGGGCCBHHHHHHHHH----HHHHHTCEEEEEESSHHHHHHH------------------H
T ss_pred CHHHHHHHHHCCCCEEEECCCCCHHCHHHHHHHHH----HHHHCCCCEEEEECCHHHHHHH------------------H
T ss_conf 64228999755988899647430000013699999----9998599167862406887788------------------7
Q ss_pred CCCCCEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHC
Q ss_conf 01341132051353045576431124554467999999633224164308862778987899996689896889743435
Q gi|254780197|r 159 KSSVPVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASL 238 (264)
Q Consensus 159 ~~~~~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl 238 (264)
..+..+|||||+||||||+++++++.+.++..++. +.+ ..+++||||||||++.|..+++...++||+|||+|||
T Consensus 135 ~l~~~iiayeP~waIGtg~~~~~~~~~~i~~~~~~-i~~----~~~~i~vlyGgsV~~~~~~~~~~~~g~DGvLVGsA~l 209 (225)
T 1hg3_A 135 ALNPDYVAVEPPELIGTGIPVSKAKPEVITNTVEL-VKK----VNPEVKVLCGAGISTGEDVKKAIELGTVGVLLASGVT 209 (225)
T ss_dssp TTCCSEEEECCTTTTTTSCCTTTSCTHHHHHHHHH-HHH----HCTTSEEEEESSCCSHHHHHHHHHTTCSEEEESHHHH
T ss_pred HHCCCEEEEEEHHHCCCCCCCCCCCHHHHHHHHHH-HHH----HCCCEEEEEECCCCCHHHHHHHHHCCCCEEEECCEEE
T ss_conf 50763599950231368878773458999999999-986----3364048983686977899998727997899842634
Q ss_pred CHHHHHHHHHHHH
Q ss_conf 8899999999999
Q gi|254780197|r 239 QHELFLKIVEIVE 251 (264)
Q Consensus 239 ~~~~F~~Ii~~~~ 251 (264)
++++|.++++..-
T Consensus 210 ka~d~~~~l~~l~ 222 (225)
T 1hg3_A 210 KAKDPEKAIWDLV 222 (225)
T ss_dssp TCSSHHHHHHHHH
T ss_pred ECCCHHHHHHHHH
T ss_conf 2769999999999
No 22
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=100.00 E-value=0 Score=418.50 Aligned_cols=220 Identities=21% Similarity=0.266 Sum_probs=184.0
Q ss_pred CCCEEEEEEECCCCCH--HHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCC
Q ss_conf 8850699864656899--99999999995222345771199968965599999973257631022201222333433212
Q gi|254780197|r 4 GIRPLVVGNWKMHGLR--LSLERIQKIVEGIRRNSCCIDVAICPPATLIYESSRLCKTSSVIIGAQDCHIAEYGPYTGDI 81 (264)
Q Consensus 4 ~mK~iIigNWKMN~~~--~~~~~~~~~~~~~~~~~~~veivi~Pp~~~L~~~~~~~~~s~I~igAQnv~~~~~GA~TGei 81 (264)
|++|+|++|||||++. .....+.+.+..+.. ..++++++|||+++|..+.+ ..++.+|||||++.+.|||||++
T Consensus 1 M~~p~ii~N~K~y~~~~g~~~~~l~~~~~~~~~-~~~~~i~vap~~~~l~~~~~---~~~i~v~aQ~~~~~~~Ga~TG~i 76 (226)
T 1w0m_A 1 MRLPILIINFKAYGEAAGKRAVELAKAAERAAR-ELGVNIVVAPNHLELGLVSQ---SVDIPVYAQGADVEAGGAHTAHV 76 (226)
T ss_dssp CCSSEEEEECTBCGGGSTHHHHHHHHHHHHHHH-HHTCEEEEECCGGGHHHHHT---TCSSCBEESCCSBSSCSSCTTCC
T ss_pred CCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCC-CCCCEEEEECCHHHHHHHHH---CCCCEEEEECCCCCCCCCCCCHH
T ss_conf 999889998387867435699999999986235-46988999899999999970---27970996047887898870665
Q ss_pred CHHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCCCCC
Q ss_conf 06777540731001042000221357999999999999833474799816552033349800011100222100000013
Q gi|254780197|r 82 SANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEFKSS 161 (264)
Q Consensus 82 Sa~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~~~~ 161 (264)
|+.||+|+|++|+||||||||..|+|.++ ++++++++||.||+||||+++.++.. +.+
T Consensus 77 s~~~l~~~g~~~viigHsErR~~~~e~~~----~v~~a~~~gl~~IvCvge~~e~~~~~------------------~l~ 134 (226)
T 1w0m_A 77 SLENIKEAGGSGVILNHSEAPLKLNDLAR----LVAKAKSLGLDVVVCAPDPRTSLAAA------------------ALG 134 (226)
T ss_dssp BHHHHHHHTCCEEEECCTTSCCBHHHHHH----HHHHHHHTTCEEEEEESSHHHHHHHH------------------HTC
T ss_pred HHHHHHHCCCCEEEECCHHHHHHHCHHHH----HHHHHHHCCCEEEEECCCCHHHHHHC------------------CCC
T ss_conf 69999875997999743687765100689----99999988998999758719988630------------------368
Q ss_pred CCEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCHH
Q ss_conf 41132051353045576431124554467999999633224164308862778987899996689896889743435889
Q gi|254780197|r 162 VPVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQHE 241 (264)
Q Consensus 162 ~~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~~ 241 (264)
+.+|||||+||||||++++++++++++.++|. +++ ...+++|||||||+++|..+++.++++||+|||+|||+++
T Consensus 135 ~~iIayEp~waIGtg~~~~~~~~~~i~~~i~~-ik~----~~~~v~vlyGGgV~~~n~~~~~~~~g~DGvLVGsA~l~a~ 209 (226)
T 1w0m_A 135 PHAVAVEPPELIGTGRAVSRYKPEAIVETVGL-VSR----HFPEVSVITGAGIESGDDVAAALRLGTRGVLLASAAVKAK 209 (226)
T ss_dssp CSEEEECCGGGTTTSCCHHHHCHHHHHHHHHH-HHH----HCTTSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHTCS
T ss_pred CEEEEEEEHHEECCCCCCCHHHHHHHHHHHHH-HHC----CCCCEEEEEECCCCCHHHHHHHHCCCCCEEEEEEEEECCC
T ss_conf 70899830200148878886558999999999-850----1788159996574766799998558995899842430588
Q ss_pred H-HHHHHHHHHHHH
Q ss_conf 9-999999999999
Q gi|254780197|r 242 L-FLKIVEIVERVY 254 (264)
Q Consensus 242 ~-F~~Ii~~~~~~~ 254 (264)
+ |..|.+.++++.
T Consensus 210 d~~~~i~~l~~~l~ 223 (226)
T 1w0m_A 210 DPYAKIVELAKPLS 223 (226)
T ss_dssp SHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
T ss_conf 98999999999997
No 23
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, structural genomics, center for structural genomics of infectious diseases; 2.05A {Francisella tularensis subsp}
Probab=94.92 E-value=0.2 Score=28.27 Aligned_cols=139 Identities=12% Similarity=0.237 Sum_probs=86.4
Q ss_pred HHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCCCCCC
Q ss_conf 67775407310010420002213579999999999998334747998165520333498000111002221000000134
Q gi|254780197|r 83 ANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEFKSSV 162 (264)
Q Consensus 83 a~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~~~~~ 162 (264)
.+.+.+.|++.+.+ |.|--. .+.+-++.+.+.|+.+=+.+.-.-. .+.+ ...+..++ ..
T Consensus 102 i~~~~~~g~d~I~~-H~E~~~-------~~~~~i~~ik~~g~k~Glalnp~T~-------i~~l----~~~l~~iD--~V 160 (246)
T 3inp_A 102 IESFAKAGATSIVF-HPEASE-------HIDRSLQLIKSFGIQAGLALNPATG-------IDCL----KYVESNID--RV 160 (246)
T ss_dssp HHHHHHHTCSEEEE-CGGGCS-------CHHHHHHHHHTTTSEEEEEECTTCC-------SGGG----TTTGGGCS--EE
T ss_pred HHHHHHCCCCEEEE-ECCCCC-------CHHHHHHHHHHCCCEEEEEECCCCC-------HHHH----HHHHHHHC--EE
T ss_conf 99998679979998-420210-------8999999999819817999637778-------9999----88764000--35
Q ss_pred CEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCHHH
Q ss_conf 11320513530455764311245544679999996332241643088627789878999966898968897434358899
Q gi|254780197|r 163 PVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQHEL 242 (264)
Q Consensus 163 ~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~~~ 242 (264)
++..-+|-+ .|+.-.++-.+++. .+|+.+.+ ...++.|---|+||.+|+.++.. .++|.+-+|+|=.+.++
T Consensus 161 lvM~V~PGf---~GQ~f~~~~l~kI~-~l~~~~~~----~~~~~~I~VDGGIn~~ti~~l~~-aGad~~V~GSaiF~~~d 231 (246)
T 3inp_A 161 LIMSVNPGF---GGQKFIPAMLDKAK-EISKWISS----TDRDILLEIDGGVNPYNIAEIAV-CGVNAFVAGSAIFNSDS 231 (246)
T ss_dssp EEECSCTTC-----CCCCTTHHHHHH-HHHHHHHH----HTSCCEEEEESSCCTTTHHHHHT-TTCCEEEESHHHHTSSC
T ss_pred EEEECCCCC---CCCHHHHHHHHHHH-HHHHHHHC----CCCCCEEEEECCCCHHHHHHHHH-CCCCEEEECHHHHCCCC
T ss_conf 674216988---76114577999999-99988752----47771599979879999999998-79999997868868999
Q ss_pred HHHHHHHHH
Q ss_conf 999999999
Q gi|254780197|r 243 FLKIVEIVE 251 (264)
Q Consensus 243 F~~Ii~~~~ 251 (264)
..+.++..+
T Consensus 232 ~~~~i~~lr 240 (246)
T 3inp_A 232 YKQTIDKMR 240 (246)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
T ss_conf 999999999
No 24
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=94.76 E-value=0.14 Score=29.24 Aligned_cols=143 Identities=16% Similarity=0.205 Sum_probs=85.9
Q ss_pred HHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCCCCCC
Q ss_conf 67775407310010420002213579999999999998334747998165520333498000111002221000000134
Q gi|254780197|r 83 ANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEFKSSV 162 (264)
Q Consensus 83 a~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~~~~~ 162 (264)
...+.+.|++...+ |.|. +++..+.+-+..+.+.|+.+-+.+--. ...+.+...+ ..+. ..
T Consensus 78 i~~~~~~g~~~i~~-H~E~-----~~~~~~~~~i~~ik~~g~k~Glal~p~-------T~i~~i~~~l----~~~d--~v 138 (230)
T 1tqj_A 78 VEDFAKAGADIISV-HVEH-----NASPHLHRTLCQIRELGKKAGAVLNPS-------TPLDFLEYVL----PVCD--LI 138 (230)
T ss_dssp HHHHHHHTCSEEEE-ECST-----TTCTTHHHHHHHHHHTTCEEEEEECTT-------CCGGGGTTTG----GGCS--EE
T ss_pred HHHHHHCCCCEEEE-ECCC-----CCCHHHHHHHHHHHHCCCCEEEEECCC-------CCHHHHHHHH----CCCC--EE
T ss_conf 99998648978998-2454-----556468999999998699189997799-------9879999986----5368--69
Q ss_pred CEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCHHH
Q ss_conf 11320513530455764311245544679999996332241643088627789878999966898968897434358899
Q gi|254780197|r 163 PVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQHEL 242 (264)
Q Consensus 163 ~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~~~ 242 (264)
++..-+|-.+ |+.-.+.-.+++. .+|+.+.+ ...++.|-=-|+||.+|+..+.. .++|.+-+|+|=.+.++
T Consensus 139 liM~V~PGf~---GQ~f~~~~~~kI~-~~~~~~~~----~~~~~~I~VDGGIn~~~i~~l~~-~Gad~~V~GS~if~~~d 209 (230)
T 1tqj_A 139 LIMSVNPGFG---GQSFIPEVLPKIR-ALRQMCDE----RGLDPWIEVDGGLKPNNTWQVLE-AGANAIVAGSAVFNAPN 209 (230)
T ss_dssp EEESSCC-------CCCCGGGHHHHH-HHHHHHHH----HTCCCEEEEESSCCTTTTHHHHH-HTCCEEEESHHHHTSSC
T ss_pred EEEEECCCCC---CCCCCCHHHHHHH-HHHHHHHC----CCCCEEEEEECCCCHHHHHHHHH-CCCCEEEECHHHHCCCC
T ss_conf 9998547878---7655602689999-99999723----59970699978888999999998-69999997868848999
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999999
Q gi|254780197|r 243 FLKIVEIVERV 253 (264)
Q Consensus 243 F~~Ii~~~~~~ 253 (264)
+.+.++..++.
T Consensus 210 ~~~~i~~lr~~ 220 (230)
T 1tqj_A 210 YAEAIAGVRNS 220 (230)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHHHH
T ss_conf 99999999985
No 25
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol- phosphate, lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=94.31 E-value=0.3 Score=27.22 Aligned_cols=54 Identities=19% Similarity=0.350 Sum_probs=40.4
Q ss_pred CC-CCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCC-CHHHHHHHHCCCCCCEEEECHHHC
Q ss_conf 55-76431124554467999999633224164308862778-987899996689896889743435
Q gi|254780197|r 175 TG-RVPAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSV-DVANAEDFSLIENIDGLLVGGASL 238 (264)
Q Consensus 175 tG-~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV-~~~N~~~l~~~~~iDG~LVG~ASl 238 (264)
|| +.+-+.++.+..+.||+. .++||.+|..+ +++-++++.+. ..||+-||+|-.
T Consensus 179 TG~~~~~~~~~~~~i~~ir~~---------t~~Pi~vGFGI~~~e~v~~~~~~-gADGvVVGSaiv 234 (262)
T 1rd5_A 179 TGPRANVNPRVESLIQEVKKV---------TNKPVAVGFGISKPEHVKQIAQW-GADGVIIGSAMV 234 (262)
T ss_dssp BCTTSCBCTHHHHHHHHHHHH---------CSSCEEEESCCCSHHHHHHHHHT-TCSEEEECHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHC---------CCCCEEEEECCCCHHHHHHHHHC-CCCEEEECHHHH
T ss_conf 221221210278899987513---------68877999278999999999854-999999888999
No 26
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=91.75 E-value=0.72 Score=24.82 Aligned_cols=137 Identities=8% Similarity=-0.070 Sum_probs=64.2
Q ss_pred CHHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHH--CCCCCCCCCCCHHHHHHCCCC
Q ss_conf 067775407310010420002213579999999999998334747998165520333--498000111002221000000
Q gi|254780197|r 82 SANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYR--SGRTFEVLQKQLDCSLPSEFK 159 (264)
Q Consensus 82 Sa~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~--~~~~~~~l~~Ql~~~l~~~~~ 159 (264)
.+..+-+.|++.+++| |+ . -++.+.+.+-.+..-...+..-+-+......+. ...+.+...-.+...++....
T Consensus 89 ~~~~ll~~G~~kvii~-S~---~-~~~~~~~~~~~~~~g~~~iv~~id~~~~~~~~~v~~~~~~~~t~~~~~~~~~~~~~ 163 (252)
T 1ka9_F 89 DARKLLLSGADKVSVN-SA---A-VRRPELIRELADHFGAQAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKGVE 163 (252)
T ss_dssp HHHHHHHHTCSEEEEC-HH---H-HHCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHCCCCEEEEC-CH---H-HCCHHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEECCCEEECCCCHHHHHHHHHH
T ss_conf 8789987389899988-42---4-30789999999854654326899876406775899759877669779999999987
Q ss_pred --CCCCEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCC-HHHHHHHHCCCCCCEEEECHH
Q ss_conf --13411320513530455764311245544679999996332241643088627789-878999966898968897434
Q gi|254780197|r 160 --SSVPVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVD-VANAEDFSLIENIDGLLVGGA 236 (264)
Q Consensus 160 --~~~~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~-~~N~~~l~~~~~iDG~LVG~A 236 (264)
... |=+--+=.-||+.=++.+.++++ ++ ..++|++++|.|+ .+...++.+ .++||++||.|
T Consensus 164 ~g~~e--iiltdi~~dGt~~G~d~~l~~~i----~~---------~~~~pii~sGGv~~~~dl~~l~~-~g~~gvivg~a 227 (252)
T 1ka9_F 164 LGAGE--ILLTSMDRDGTKEGYDLRLTRMV----AE---------AVGVPVIASGGAGRMEHFLEAFQ-AGAEAALAASV 227 (252)
T ss_dssp HTCCE--EEEEETTTTTTCSCCCHHHHHHH----HH---------HCSSCEEEESCCCSHHHHHHHHH-TTCSEEEESHH
T ss_pred CCCCE--EEEEEECCCCCCCCCCHHHHHHH----HH---------HCCCCEEEECCCCCHHHHHHHHH-CCCCEEEEEHH
T ss_conf 47988--99986234576667416799999----85---------16987999779899999999997-89979998528
Q ss_pred HCC
Q ss_conf 358
Q gi|254780197|r 237 SLQ 239 (264)
Q Consensus 237 Sl~ 239 (264)
-+.
T Consensus 228 l~~ 230 (252)
T 1ka9_F 228 FHF 230 (252)
T ss_dssp HHT
T ss_pred HHC
T ss_conf 776
No 27
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=91.54 E-value=0.26 Score=27.56 Aligned_cols=45 Identities=20% Similarity=0.349 Sum_probs=34.5
Q ss_pred CCCEEEECCCC-CHHHHHHHHCCCCCCEEEECHHHC-CHHHHHHHHH
Q ss_conf 64308862778-987899996689896889743435-8899999999
Q gi|254780197|r 204 QKMRILYGGSV-DVANAEDFSLIENIDGLLVGGASL-QHELFLKIVE 248 (264)
Q Consensus 204 ~~i~ilYGGSV-~~~N~~~l~~~~~iDG~LVG~ASl-~~~~F~~Ii~ 248 (264)
+++||++=|.| +.+.+.++++..++||+.|||+++ +|--|.+|-+
T Consensus 182 ~~iPvi~NGdI~s~~da~~~l~~tg~dGVMIGRgal~nP~if~~i~~ 228 (318)
T 1vhn_A 182 KRIPTFVSGDIFTPEDAKRALEESGCDGLLVARGAIGRPWIFKQIKD 228 (318)
T ss_dssp CSSCEEEESSCCSHHHHHHHHHHHCCSEEEESGGGTTCTTHHHHHHH
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECHHHHHCCHHHHHHHH
T ss_conf 15861015886999999999872389979971765719799999999
No 28
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=91.23 E-value=0.21 Score=28.18 Aligned_cols=136 Identities=20% Similarity=0.136 Sum_probs=65.5
Q ss_pred CCCHHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCC-
Q ss_conf 1206777540731001042000221357999999999999833474799816552033349800011100222100000-
Q gi|254780197|r 80 DISANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEF- 158 (264)
Q Consensus 80 eiSa~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~- 158 (264)
.-.++.+-+.|++.+++|-+ .-++.+.+.. +.... +-..++.+ .....+-...-...........+....
T Consensus 87 ~~~~~~~l~~Ga~kvii~s~-----~~~~~~~~~~-~~~~~--g~~~ivsl-D~~~~~~~~~g~~~~~~~~~~~~~~~~~ 157 (244)
T 1vzw_A 87 DDTLAAALATGCTRVNLGTA-----ALETPEWVAK-VIAEH--GDKIAVGL-DVRGTTLRGRGWTRDGGDLYETLDRLNK 157 (244)
T ss_dssp HHHHHHHHHTTCSEEEECHH-----HHHCHHHHHH-HHHHH--GGGEEEEE-EEETTEECCSSSCCCCCBHHHHHHHHHH
T ss_pred ECCCCCCCCCCCCCCHHHHH-----HHHCCHHHHH-HHHHC--CCEEEEEE-CCCEEEECCCCEECCCCCCHHHHHHHHH
T ss_conf 00021101345432044566-----6519198899-99876--92579984-0213673245353266543567778875
Q ss_pred -CCCCCEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCC-HHHHHHHHCC--CCCCEEEEC
Q ss_conf -013411320513530455764311245544679999996332241643088627789-8789999668--989688974
Q gi|254780197|r 159 -KSSVPVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVD-VANAEDFSLI--ENIDGLLVG 234 (264)
Q Consensus 159 -~~~~~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~-~~N~~~l~~~--~~iDG~LVG 234 (264)
....++ +--+=.-||++=++.+-++ .++++ .++|++|+|.|+ .+...++.+. .++||++||
T Consensus 158 ~g~~eii--~~di~~dGt~~G~d~~l~~----~i~~~---------~~~pvi~~GGv~s~~Dl~~l~~l~~~g~~gvivg 222 (244)
T 1vzw_A 158 EGCARYV--VTDIAKDGTLQGPNLELLK----NVCAA---------TDRPVVASGGVSSLDDLRAIAGLVPAGVEGAIVG 222 (244)
T ss_dssp TTCCCEE--EEEC-------CCCHHHHH----HHHHT---------CSSCEEEESCCCSHHHHHHHHTTGGGTEEEEEEC
T ss_pred HCCCEEE--EEEECCCCCCCCCCHHHHH----HHHHH---------CCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEH
T ss_conf 1664588--7776255876668999999----99986---------8998999889999999999976404891054456
Q ss_pred HHHCC
Q ss_conf 34358
Q gi|254780197|r 235 GASLQ 239 (264)
Q Consensus 235 ~ASl~ 239 (264)
+|=+.
T Consensus 223 sAl~~ 227 (244)
T 1vzw_A 223 KALYA 227 (244)
T ss_dssp HHHHT
T ss_pred HHHHC
T ss_conf 89887
No 29
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=90.39 E-value=0.31 Score=27.09 Aligned_cols=45 Identities=29% Similarity=0.538 Sum_probs=32.0
Q ss_pred CCCEEEECCCC-CHHHHHHHHCCCCCCEEEECHHHC-CHHHHHHHHHHH
Q ss_conf 64308862778-987899996689896889743435-889999999999
Q gi|254780197|r 204 QKMRILYGGSV-DVANAEDFSLIENIDGLLVGGASL-QHELFLKIVEIV 250 (264)
Q Consensus 204 ~~i~ilYGGSV-~~~N~~~l~~~~~iDG~LVG~ASl-~~~~F~~Ii~~~ 250 (264)
.++|+.+|+.+ +++-++++.+ ..||+-||+|=- +++++.++++.+
T Consensus 181 t~~Pv~vGFGIst~eqa~~i~~--~ADGVVVGSAive~i~~~~~~v~~i 227 (240)
T 1viz_A 181 ETSTLFYGGGIKDAETAKQYAE--HADVIVVGNAVYEDFDRALKTVAAV 227 (240)
T ss_dssp SSSEEEEESSCCSHHHHHHHHT--TCSEEEECTHHHHCHHHHHTHHHHH
T ss_pred CCCCEEEECCCCCHHHHHHHHC--CCCEEEECHHHHHHHHHHHHHHHHH
T ss_conf 6887799858599999999980--6999998968871499999999999
No 30
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA; 2.00A {Aquifex aeolicus VF5}
Probab=90.23 E-value=0.92 Score=24.15 Aligned_cols=111 Identities=16% Similarity=0.139 Sum_probs=56.5
Q ss_pred HHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCC-CCHHHHHHCCC---CCCC--CEEEECH--HHHH---C-CCCC--C
Q ss_conf 9999998334747998165520333498000111-00222100000---0134--1132051--3530---4-5576--4
Q gi|254780197|r 114 SKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQ-KQLDCSLPSEF---KSSV--PVIAYEP--IWAI---G-TGRV--P 179 (264)
Q Consensus 114 ~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~-~Ql~~~l~~~~---~~~~--~iIAYEP--vWAI---G-tG~~--a 179 (264)
+=++.|.+.|..-++|.+-+.++.+.- .+.+. ..+..+. -+. ..++ .+.++-. ++.+ | ||.- .
T Consensus 113 ~f~~~~~~~Gv~gviipDlp~ee~~~~--~~~~~~~gl~~I~-lvsp~t~~~ri~~i~~~s~gfiY~vs~~GvTG~~~~~ 189 (262)
T 2ekc_A 113 KFCRLSREKGIDGFIVPDLPPEEAEEL--KAVMKKYVLSFVP-LGAPTSTRKRIKLICEAADEMTYFVSVTGTTGAREKL 189 (262)
T ss_dssp HHHHHHHHTTCCEEECTTCCHHHHHHH--HHHHHHTTCEECC-EECTTCCHHHHHHHHHHCSSCEEEESSCC--------
T ss_pred HHHHHHHHCCCCEEECCCCCHHHHHHH--HHHHHCCCEEEEE-ECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC
T ss_conf 999999976975786158866766777--7675205544676-3588886888888875156426772135636756656
Q ss_pred CCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCH-HHHHHHHCCCCCCEEEECHHHC
Q ss_conf 3112455446799999963322416430886277898-7899996689896889743435
Q gi|254780197|r 180 AVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVDV-ANAEDFSLIENIDGLLVGGASL 238 (264)
Q Consensus 180 ~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~-~N~~~l~~~~~iDG~LVG~ASl 238 (264)
....++...+.+|+. .++|++.|..++. +.++.+. ...||+-||+|-.
T Consensus 190 ~~~~~~~~i~~ik~~---------t~~Pv~vGFGI~~~e~v~~~~--~~ADgvVVGSaiv 238 (262)
T 2ekc_A 190 PYERIKKKVEEYREL---------CDKPVVVGFGVSKKEHAREIG--SFADGVVVGSALV 238 (262)
T ss_dssp -CHHHHHHHHHHHHH---------CCSCEEEESSCCSHHHHHHHH--TTSSEEEECHHHH
T ss_pred CCHHHHHHHHHHHHC---------CCCCEEEECCCCCHHHHHHHH--HCCCEEEECHHHH
T ss_conf 502578999998512---------688758862659999999998--2199999878999
No 31
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=90.17 E-value=1 Score=23.89 Aligned_cols=55 Identities=15% Similarity=0.193 Sum_probs=37.6
Q ss_pred CCC-CCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCH-HHHHHHHCCCCCCEEEECHHHCC
Q ss_conf 557-643112455446799999963322416430886277898-78999966898968897434358
Q gi|254780197|r 175 TGR-VPAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVDV-ANAEDFSLIENIDGLLVGGASLQ 239 (264)
Q Consensus 175 tG~-~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~-~N~~~l~~~~~iDG~LVG~ASl~ 239 (264)
||. ..-+..+.+..+.+|+. .++||++|..++. +.+.+.++ ...||+-||+|-.+
T Consensus 183 TG~~~~~~~~~~~~i~~ik~~---------t~~Pv~vGFGI~~~e~v~~~~~-~~ADGvVVGSaiv~ 239 (268)
T 1qop_A 183 TGAENRGALPLHHLIEKLKEY---------HAAPALQGFGISSPEQVSAAVR-AGAAGAISGSAIVK 239 (268)
T ss_dssp CCSSSCC--CCHHHHHHHHHT---------TCCCEEEESSCCSHHHHHHHHH-TTCSEEEECHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHC---------CCCCCEEEECCCCHHHHHHHHH-CCCCEEEECHHHHH
T ss_conf 876543105689999999754---------6888357615699999999986-38998998889999
No 32
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti MAFF303099} SCOP: c.1.12.9
Probab=90.07 E-value=0.61 Score=25.28 Aligned_cols=103 Identities=12% Similarity=0.106 Sum_probs=60.3
Q ss_pred HHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCCCCCCCEEEECHHHHHCCCCCCCCH-HHHHHHHHHHHH
Q ss_conf 9999833474799816552033349800011100222100000013411320513530455764311-245544679999
Q gi|254780197|r 116 VKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEFKSSVPVIAYEPIWAIGTGRVPAVV-DLEKIHSFVRRI 194 (264)
Q Consensus 116 ~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~~~~~~iIAYEPvWAIGtG~~a~~~-~i~~~~~~Ir~~ 194 (264)
+..|.+.+|..+.|+--..+ - ... .....-+|++||.+-||++..++.. -.++..+.|+++
T Consensus 156 I~~Ar~~~l~t~~~~~~~~~-A-------------~a~----a~aGaD~I~ie~p~t~Gg~ig~~~a~~le~~~~~i~~i 217 (286)
T 2p10_A 156 IAEAHKLDLLTTPYVFSPED-A-------------VAM----AKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINEC 217 (286)
T ss_dssp HHHHHHTTCEECCEECSHHH-H-------------HHH----HHHTCSEEEEECSCC---------CCCHHHHHHHHHHH
T ss_pred HHHHHHCCCCCCCCCCCHHH-H-------------HHH----HHCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 99998727642141489999-9-------------999----98199999966874557874667677889999999999
Q ss_pred HHHHCCHHHCCCEEE-ECCC-CCHHHHHHHHC-CCCCCEEEECHHHC
Q ss_conf 996332241643088-6277-89878999966-89896889743435
Q gi|254780197|r 195 LLDRFPEEGQKMRIL-YGGS-VDVANAEDFSL-IENIDGLLVGGASL 238 (264)
Q Consensus 195 l~~~~~~~~~~i~il-YGGS-V~~~N~~~l~~-~~~iDG~LVG~ASl 238 (264)
...- ....+++.+| +||- .+|+.+...++ .+.++||+- ..|+
T Consensus 218 ~~a~-~~vnp~iivLc~GGpI~tp~D~~~~l~~~~~~~Gf~g-aSs~ 262 (286)
T 2p10_A 218 IEAA-RTIRDDIIILSHGGPIANPEDARFILDSCQGCHGFYG-ASSM 262 (286)
T ss_dssp HHHH-HHHCSCCEEEEESTTCCSHHHHHHHHHHCTTCCEEEE-SHHH
T ss_pred HHHH-HHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEE-CCHH
T ss_conf 9999-9749995899706998998999999971899629973-2033
No 33
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor}
Probab=89.52 E-value=1.1 Score=23.57 Aligned_cols=55 Identities=16% Similarity=0.220 Sum_probs=37.6
Q ss_pred CC-CCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCH-HHHHHHHCCCCCCEEEECHHHCC
Q ss_conf 55-7643112455446799999963322416430886277898-78999966898968897434358
Q gi|254780197|r 175 TG-RVPAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVDV-ANAEDFSLIENIDGLLVGGASLQ 239 (264)
Q Consensus 175 tG-~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~-~N~~~l~~~~~iDG~LVG~ASl~ 239 (264)
|| +.+-++++.+..+.||+. .++||.+|..++. +-++++++ ...||+-||+|-.+
T Consensus 186 TG~~~~~~~~~~~~i~~ik~~---------t~~Pv~vGFGI~~~e~v~~~~~-~~ADGvVVGSaiv~ 242 (271)
T 3nav_A 186 TGAETKANMPVHALLERLQQF---------DAPPALLGFGISEPAQVKQAIE-AGAAGAISGSAVVK 242 (271)
T ss_dssp ------CCHHHHHHHHHHHHT---------TCCCEEECSSCCSHHHHHHHHH-TTCSEEEESHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHC---------CCCCEEEEEEECCHHHHHHHHH-CCCCEEEECHHHHH
T ss_conf 787766650289999987533---------6897289830188999999987-38999998879999
No 34
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=89.22 E-value=1.2 Score=23.44 Aligned_cols=146 Identities=18% Similarity=0.187 Sum_probs=83.5
Q ss_pred HHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCCCCCC
Q ss_conf 67775407310010420002213579999999999998334747998165520333498000111002221000000134
Q gi|254780197|r 83 ANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEFKSSV 162 (264)
Q Consensus 83 a~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~~~~~ 162 (264)
..++.+.|++++.+ |.|-- +....+-++.+.+.|..+=+.+--. ...+. +...+..++ ..
T Consensus 73 i~~~~~~ga~~i~~-H~Ea~------~~~~~~~i~~i~~~g~~~Gialnp~-------T~~~~----i~~~l~~~D--~v 132 (231)
T 3ctl_A 73 IAQLARAGADFITL-HPETI------NGQAFRLIDEIRRHDMKVGLILNPE-------TPVEA----MKYYIHKAD--KI 132 (231)
T ss_dssp HHHHHHHTCSEEEE-CGGGC------TTTHHHHHHHHHHTTCEEEEEECTT-------CCGGG----GTTTGGGCS--EE
T ss_pred HHHHHHCCCCEEEE-EHHHH------CCCHHHHHHHHHHCCCEEEEEECCC-------CCHHH----HHHHHCCCC--EE
T ss_conf 99998669987996-32543------0359999999997798799995699-------97056----552313328--89
Q ss_pred CEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHC--CH
Q ss_conf 1132051353045576431124554467999999633224164308862778987899996689896889743435--88
Q gi|254780197|r 163 PVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASL--QH 240 (264)
Q Consensus 163 ~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl--~~ 240 (264)
++..-+|- ..|+.-.++-.+++ +.+|+++.+. ..++.|-=-|+||.+|+..+.. .++|-+-+|++++ ++
T Consensus 133 l~M~V~pG---~~Gq~f~~~~l~ki-~~l~~~~~~~----~~~~~I~VDGGIn~e~i~~l~~-aGad~~V~Gss~iF~~~ 203 (231)
T 3ctl_A 133 TVMTVDPG---FAGQPFIPEMLDKL-AELKAWRERE----GLEYEIEVDGSCNQATYEKLMA-AGADVFIVGTSGLFNHA 203 (231)
T ss_dssp EEESSCTT---CSSCCCCTTHHHHH-HHHHHHHHHH----TCCCEEEEESCCSTTTHHHHHH-HTCCEEEECTTTTGGGC
T ss_pred EEEEECCC---CCCCCCHHHHHHHH-HHHHHHHHHC----CCCCEEEEECCCCHHHHHHHHH-CCCCEEEECCHHHCCCC
T ss_conf 99577688---78753258899999-9999999834----9993699989988999999998-69899998818875899
Q ss_pred HHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999984
Q gi|254780197|r 241 ELFLKIVEIVERVYVDS 257 (264)
Q Consensus 241 ~~F~~Ii~~~~~~~~~~ 257 (264)
+...+.++..++...++
T Consensus 204 ~~~~~~~~~l~~~i~~a 220 (231)
T 3ctl_A 204 ENIDEAWRIMTAQILAA 220 (231)
T ss_dssp SSHHHHHHHHHHHHHC-
T ss_pred CCHHHHHHHHHHHHHHH
T ss_conf 99999999999999998
No 35
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=88.78 E-value=0.5 Score=25.82 Aligned_cols=132 Identities=16% Similarity=0.114 Sum_probs=68.7
Q ss_pred CHHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCC--------CCCCHHHH
Q ss_conf 0677754073100104200022135799999999999983347479981655203334980001--------11002221
Q gi|254780197|r 82 SANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEV--------LQKQLDCS 153 (264)
Q Consensus 82 Sa~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~--------l~~Ql~~~ 153 (264)
.+.-+-+.|++.+++|-+- -++-+.+.+-.+..-. =.+++++.- +..+....+ ..-.+...
T Consensus 91 ~~~~~l~~G~~rvii~s~~-----~~~~~~~~~~~~~~g~--~~iv~siD~----~~~~~~~~v~~~g~~~~~~~~~~~~ 159 (253)
T 1h5y_A 91 DATTLFRAGADKVSVNTAA-----VRNPQLVALLAREFGS--QSTVVAIDA----KWNGEYYEVYVKGGREATGLDAVKW 159 (253)
T ss_dssp HHHHHHHHTCSEEEESHHH-----HHCTHHHHHHHHHHCG--GGEEEEEEE----EECSSSEEEEETTTTEEEEEEHHHH
T ss_pred HHHHHHHCCCCEEECCCCC-----EECCHHHHHHHHHCCC--CEEEEEEEE----EECCCCEEEEEECCCCCCCCCHHHH
T ss_conf 6778886489889538603-----4386477999987699--529999999----9859957999949943789789999
Q ss_pred HHCCCC--CCCCEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCC-HHHHHHHHCCCCCCE
Q ss_conf 000000--13411320513530455764311245544679999996332241643088627789-878999966898968
Q gi|254780197|r 154 LPSEFK--SSVPVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVD-VANAEDFSLIENIDG 230 (264)
Q Consensus 154 l~~~~~--~~~~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~-~~N~~~l~~~~~iDG 230 (264)
++.... ... |=|-.+=.-||++=++.+-++++. +. .++|++|+|.|+ .+..+++.+ .+++|
T Consensus 160 ~~~~~~~g~~e--ii~tdI~~dGt~~G~d~~~l~~i~----~~---------~~~pii~~GGv~~~~dl~~l~~-~g~~g 223 (253)
T 1h5y_A 160 AKEVEELGAGE--ILLTSIDRDGTGLGYDVELIRRVA----DS---------VRIPVIASGGAGRVEHFYEAAA-AGADA 223 (253)
T ss_dssp HHHHHHHTCSE--EEEEETTTTTTCSCCCHHHHHHHH----HH---------CSSCEEEESCCCSHHHHHHHHH-TTCSE
T ss_pred HHHHHHCCCCE--EEEEEECCCCCCCCCCHHHHHHHH----HH---------CCCCEEEECCCCCHHHHHHHHH-CCCCE
T ss_conf 99998579998--999745147876876889999999----85---------6998899759999999999997-89968
Q ss_pred EEECHHHCCH
Q ss_conf 8974343588
Q gi|254780197|r 231 LLVGGASLQH 240 (264)
Q Consensus 231 ~LVG~ASl~~ 240 (264)
+++|.|-+.-
T Consensus 224 vivgsal~~~ 233 (253)
T 1h5y_A 224 VLAASLFHFR 233 (253)
T ss_dssp EEESHHHHTT
T ss_pred EEEHHHHHCC
T ss_conf 9885687859
No 36
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=88.47 E-value=1.3 Score=23.12 Aligned_cols=139 Identities=18% Similarity=0.196 Sum_probs=80.3
Q ss_pred HHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCCCCCC
Q ss_conf 67775407310010420002213579999999999998334747998165520333498000111002221000000134
Q gi|254780197|r 83 ANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEFKSSV 162 (264)
Q Consensus 83 a~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~~~~~ 162 (264)
...+.+.|+++ +.=|.|--. .+..-++.+.+.|+.+-+.+-=. ...+.+. ..+..++. .
T Consensus 77 i~~~~~~g~d~-I~~H~E~~~-------~~~~~i~~i~~~g~~~Glal~p~-------T~~~~~~----~~l~~vd~--v 135 (220)
T 2fli_A 77 VEAFAQAGADI-MTIHTESTR-------HIHGALQKIKAAGMKAGVVINPG-------TPATALE----PLLDLVDQ--V 135 (220)
T ss_dssp HHHHHHHTCSE-EEEEGGGCS-------CHHHHHHHHHHTTSEEEEEECTT-------SCGGGGG----GGTTTCSE--E
T ss_pred HHHHHHCCCCE-EEECHHHHC-------CHHHHHHHHHHCCCEEEEEECCC-------CCCHHHH----HHHHHCCE--E
T ss_conf 99998659978-995323320-------88999999987698699996487-------6403666----16755087--9
Q ss_pred CEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCHHH
Q ss_conf 11320513530455764311245544679999996332241643088627789878999966898968897434358899
Q gi|254780197|r 163 PVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQHEL 242 (264)
Q Consensus 163 ~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~~~ 242 (264)
++..-+|-. .|+.-.+.-.+++ +.+|+.+.+ ...++.|.=-|+||.+|++++.+ .++|.+.+|+|=.+.++
T Consensus 136 lvM~V~pG~---~Gq~f~~~~~~ki-~~l~~~~~~----~~~~~~I~vDGGin~~~i~~l~~-~Gad~~V~GS~if~~~d 206 (220)
T 2fli_A 136 LIMTVNPGF---GGQAFIPECLEKV-ATVAKWRDE----KGLSFDIEVDGGVDNKTIRACYE-AGANVFVAGSYLFKASD 206 (220)
T ss_dssp EEESSCTTC---SSCCCCGGGHHHH-HHHHHHHHH----TTCCCEEEEESSCCTTTHHHHHH-HTCCEEEESHHHHTSSC
T ss_pred EEEEECCCC---CCCCCCHHHHHHH-HHHHHHHHH----CCCCEEEEEECCCCHHHHHHHHH-CCCCEEEECHHHHCCCC
T ss_conf 898875664---6655540578999-999999975----29970699846778887999998-79999997858868999
Q ss_pred HHHHHHHHH
Q ss_conf 999999999
Q gi|254780197|r 243 FLKIVEIVE 251 (264)
Q Consensus 243 F~~Ii~~~~ 251 (264)
..+-++..+
T Consensus 207 ~~~~i~~Lr 215 (220)
T 2fli_A 207 LVSQVQTLR 215 (220)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
T ss_conf 999999999
No 37
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid, csgid, Mg-bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} PDB: 3ieb_A*
Probab=88.32 E-value=1.1 Score=23.68 Aligned_cols=139 Identities=15% Similarity=0.098 Sum_probs=74.9
Q ss_pred CCCCHHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCC
Q ss_conf 21206777540731001042000221357999999999999833474799816552033349800011100222100000
Q gi|254780197|r 79 GDISANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEF 158 (264)
Q Consensus 79 GeiSa~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~ 158 (264)
|..-..++++.|++++.+ |++- ..+.+..=.+.+.+.|+.+.+=.-.... .+-....++. +
T Consensus 72 ~~~~~~~~~~~gad~itv-h~~~------~~~~l~~~~~~~~~~g~~~~v~l~~~~~-------~~~~~~~~~~---~-- 132 (218)
T 3jr2_A 72 GAILSRMAFEAGADWITV-SAAA------HIATIAACKKVADELNGEIQIEIYGNWT-------MQDAKAWVDL---G-- 132 (218)
T ss_dssp HHHHHHHHHHHTCSEEEE-ETTS------CHHHHHHHHHHHHHHTCEEEEECCSSCC-------HHHHHHHHHT---T--
T ss_pred CHHHHHHHHHHCCCEEEE-ECCC------CHHHHHHHHHHHHHCCCCEEEECCCCCC-------HHHHHHHHHC---C--
T ss_conf 277889988744989999-5034------5478999999876418843784278899-------9999998864---8--
Q ss_pred CCCCC--EEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHH
Q ss_conf 01341--1320513530455764311245544679999996332241643088627789878999966898968897434
Q gi|254780197|r 159 KSSVP--VIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVDVANAEDFSLIENIDGLLVGGA 236 (264)
Q Consensus 159 ~~~~~--iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~A 236 (264)
...+ ..++++. .- |....++.+++ +|+.. ..++++.-.|.++++++.+.. ..+.|++-||||
T Consensus 133 -~~~~~~~~~~~~~-~~--~~~~~~~~l~~----i~~~~-------~~~~~i~v~gGi~~~~~~~~~-~~GaD~iVvGra 196 (218)
T 3jr2_A 133 -ITQAIYHRSRDAE-LA--GIGWTTDDLDK----MRQLS-------ALGIELSITGGIVPEDIYLFE-GIKTKTFIAGRA 196 (218)
T ss_dssp -CCEEEEECCHHHH-HH--TCCSCHHHHHH----HHHHH-------HTTCEEEEESSCCGGGGGGGT-TSCEEEEEESGG
T ss_pred -CHHHHHHHHHCCC-CC--CCCCCHHHHHH----HHHHH-------CCCCCEEECCCCCCCCHHHHH-HCCCCEEEECHH
T ss_conf -2286999724424-47--73668999999----99984-------899707867996825799999-849999998836
Q ss_pred HCCHHH---HHHHHHHHHH
Q ss_conf 358899---9999999999
Q gi|254780197|r 237 SLQHEL---FLKIVEIVER 252 (264)
Q Consensus 237 Sl~~~~---F~~Ii~~~~~ 252 (264)
=..+++ -.++.+.+++
T Consensus 197 I~~a~dp~~a~~~~~~i~~ 215 (218)
T 3jr2_A 197 LAGAEGQQTAAALREQIDR 215 (218)
T ss_dssp GSHHHHHHHHHHHHHHHHH
T ss_pred HCCCCCHHHHHHHHHHHHH
T ss_conf 6079999999999999997
No 38
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=88.25 E-value=0.85 Score=24.36 Aligned_cols=139 Identities=14% Similarity=0.027 Sum_probs=69.2
Q ss_pred CCCCCCCCHHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCC-CCEEEECCCCCHHHHCCCCC-------CCC
Q ss_conf 3433212067775407310010420002213579999999999998334-74799816552033349800-------011
Q gi|254780197|r 75 GPYTGDISANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAG-LYPIVCIGETDEEYRSGRTF-------EVL 146 (264)
Q Consensus 75 GA~TGeiSa~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~-l~pIlCiGE~~~e~~~~~~~-------~~l 146 (264)
|-..-.-.+..+.+.|++.+++|-+= +. +-+.+.+-. ...| -..++|+-=.. ..+... +-.
T Consensus 81 GGir~~e~~~~~l~~Ga~kVvigs~~----~~-~~~~l~~~~---~~~G~~~iv~~id~~~---~~~~~~v~~~~~~~~~ 149 (253)
T 1thf_D 81 GGIHDFETASELILRGADKVSINTAA----VE-NPSLITQIA---QTFGSQAVVVAIDAKR---VDGEFMVFTYSGKKNT 149 (253)
T ss_dssp SSCCSHHHHHHHHHTTCSEEEESHHH----HH-CTHHHHHHH---HHHCGGGEEEEEEEEE---ETTEEEEEETTTTEEE
T ss_pred CCEEECCCHHHHHHCCCCEEEECHHH----HH-CHHHHHHHH---HHHCCCCEEEEEEEEE---CCCCEEEEEECCCCCC
T ss_conf 55752221788987499999988478----62-979999999---9849844699877872---2783455541144137
Q ss_pred CCCHHHHHHCCC--CCCCCEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCC-HHHHHHHH
Q ss_conf 100222100000--013411320513530455764311245544679999996332241643088627789-87899996
Q gi|254780197|r 147 QKQLDCSLPSEF--KSSVPVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVD-VANAEDFS 223 (264)
Q Consensus 147 ~~Ql~~~l~~~~--~~~~~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~-~~N~~~l~ 223 (264)
...+...+.... ....+ =+--+=.-||+.-++.+-++++.. ..++|++++|.|+ .+...++.
T Consensus 150 ~~~~~~~~~~~~~~g~~ei--iltdI~~dGt~~G~d~~~l~~i~~-------------~~~~pii~~GGv~s~~dl~~l~ 214 (253)
T 1thf_D 150 GILLRDWVVEVEKRGAGEI--LLTSIDRDGTKSGYDTEMIRFVRP-------------LTTLPIIASGGAGKMEHFLEAF 214 (253)
T ss_dssp EEEHHHHHHHHHHTTCSEE--EEEETTTTTSCSCCCHHHHHHHGG-------------GCCSCEEEESCCCSHHHHHHHH
T ss_pred CCCHHHHHHHHHHCCCCEE--EEEEECCCCCCCCCCHHHHHHHHH-------------CCCCCEEEECCCCCHHHHHHHH
T ss_conf 8769999999886379979--999752457657754013345552-------------4798789846989999999999
Q ss_pred CCCCCCEEEECHHHCCH
Q ss_conf 68989688974343588
Q gi|254780197|r 224 LIENIDGLLVGGASLQH 240 (264)
Q Consensus 224 ~~~~iDG~LVG~ASl~~ 240 (264)
+ .+++|++||.|-+..
T Consensus 215 ~-~g~~gvivgsal~~~ 230 (253)
T 1thf_D 215 L-AGADAALAASVFHFR 230 (253)
T ss_dssp H-TTCSEEEESHHHHTT
T ss_pred H-CCCCEEEEEHHHHCC
T ss_conf 7-899899980487769
No 39
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=88.04 E-value=0.55 Score=25.54 Aligned_cols=137 Identities=16% Similarity=0.074 Sum_probs=67.6
Q ss_pred CCCCCCCCHHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCC----CCCCCCCCH
Q ss_conf 3433212067775407310010420002213579999999999998334747998165520333498----000111002
Q gi|254780197|r 75 GPYTGDISANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGR----TFEVLQKQL 150 (264)
Q Consensus 75 GA~TGeiSa~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~----~~~~l~~Ql 150 (264)
|-....-.+..+-+.|++.+++|.+=.. +.+.+.. +.+..-..++.+ +.+.... ..+....-+
T Consensus 80 GGI~s~~~~~~~~~~Ga~kV~i~s~~~~-----~~~~~~~----~~~~~~~~~vsi----D~k~~~~~~~~~~~~~~~~~ 146 (241)
T 1qo2_A 80 GGIRSLDYAEKLRKLGYRRQIVSSKVLE-----DPSFLKS----LREIDVEPVFSL----DTRGGRVAFKGWLAEEEIDP 146 (241)
T ss_dssp SSCCSHHHHHHHHHTTCCEEEECHHHHH-----CTTHHHH----HHTTTCEEEEEE----EEETTEECCTTCSSCSCCCH
T ss_pred EEEEEHHHHHHHHHHHHHEECCCHHHHC-----CHHHHHH----HHCCCCCEEEEC----CCCCCCCCCCCCCCCCCCCH
T ss_conf 5887736666777642003315334431-----8466554----211364036620----24466233467531266448
Q ss_pred HHHHHCCCC--CCCCEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCC-HHHHHHHHC---
Q ss_conf 221000000--13411320513530455764311245544679999996332241643088627789-878999966---
Q gi|254780197|r 151 DCSLPSEFK--SSVPVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVD-VANAEDFSL--- 224 (264)
Q Consensus 151 ~~~l~~~~~--~~~~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~-~~N~~~l~~--- 224 (264)
...++.... ...++ +--+=.-||+.=++.+-++++. +. .++|++|+|.|. .+..+++.+
T Consensus 147 ~~~~~~~~~~g~~eii--l~~id~dGt~~G~d~~ll~~i~----~~---------~~~pii~~GGv~s~~dl~~l~~~g~ 211 (241)
T 1qo2_A 147 VSLLKRLKEYGLEEIV--HTEIEKDGTLQEHDFSLTKKIA----IE---------AEVKVLAAGGISSENSLKTAQKVHT 211 (241)
T ss_dssp HHHHHHHHTTTCCEEE--EEETTHHHHTCCCCHHHHHHHH----HH---------HTCEEEEESSCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEE--EEEHHHHHHHCCCCHHHHHHHH----HH---------CCCCEEEECCCCCHHHHHHHHHCCC
T ss_conf 9999997541563499--7415434441489879999999----74---------8973999859999999999997366
Q ss_pred --CCCCCEEEECHHHCC
Q ss_conf --898968897434358
Q gi|254780197|r 225 --IENIDGLLVGGASLQ 239 (264)
Q Consensus 225 --~~~iDG~LVG~ASl~ 239 (264)
...++|++||+|-++
T Consensus 212 ~~~~~~~gvivgsal~~ 228 (241)
T 1qo2_A 212 ETNGLLKGVIVGRAFLE 228 (241)
T ss_dssp HTTTSEEEEEECHHHHT
T ss_pred CCCCCEEEEEEHHHHHC
T ss_conf 64687806788779888
No 40
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A
Probab=87.81 E-value=1.5 Score=22.86 Aligned_cols=90 Identities=10% Similarity=0.114 Sum_probs=61.9
Q ss_pred CCCEEEECHHHH---------------HCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCE-EEECCCCCHHHHHHHHC
Q ss_conf 341132051353---------------04557643112455446799999963322416430-88627789878999966
Q gi|254780197|r 161 SVPVIAYEPIWA---------------IGTGRVPAVVDLEKIHSFVRRILLDRFPEEGQKMR-ILYGGSVDVANAEDFSL 224 (264)
Q Consensus 161 ~~~iIAYEPvWA---------------IGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~-ilYGGSV~~~N~~~l~~ 224 (264)
++.+++|.|.|. ++++..|++.++.++...||+ .+++ |++.-..++.-++.|..
T Consensus 174 ~~~~i~~H~af~Y~~~~~gl~~~~~~~~~~~~~ps~~~l~~~~~~ik~----------~~i~~i~~e~~~~~~~~~~la~ 243 (284)
T 2prs_A 174 GKGYFVFHDAYGYFEKQFGLTPLGHFTVNPEIQPGAQRLHEIRTQLVE----------QKATCVFAEPQFRPAVVESVAR 243 (284)
T ss_dssp TCCEEEEESCCHHHHHHHTCCCCEEEESSTTSCCCHHHHHHHHHHHHH----------TTCCEEEECTTSCSHHHHHHTT
T ss_pred CCCCCEECCHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHC----------CCCCEEEEECCCCHHHHHHHHH
T ss_conf 577310160567689976984754313587667898999999998751----------5984899858989199999999
Q ss_pred CCCCCEEEEC----HHHCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8989688974----34358899999999999999984300
Q gi|254780197|r 225 IENIDGLLVG----GASLQHELFLKIVEIVERVYVDSCLE 260 (264)
Q Consensus 225 ~~~iDG~LVG----~ASl~~~~F~~Ii~~~~~~~~~~~~~ 260 (264)
.-++.-+-+- .-..+++.|.++++..-+...++-++
T Consensus 244 e~~v~~~~ldpl~~~~~~~~~~Y~~~m~~n~~~l~~aL~g 283 (284)
T 2prs_A 244 GTSVRMGTLDPLGTNIKLGKTSYSEFLSQLANQYASCLKG 283 (284)
T ss_dssp TSCCEEEECCTTCTTSCCSTTHHHHHHHHHHHHHHHHHSC
T ss_pred HHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 8099779844776677777042999999999999998678
No 41
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, X-RAY analysis, stability, calorimetry lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=85.80 E-value=1.9 Score=22.18 Aligned_cols=56 Identities=21% Similarity=0.279 Sum_probs=39.7
Q ss_pred C-CCC-CCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCC-HHHHHHHHCCCCCCEEEECHHHCC
Q ss_conf 4-557-64311245544679999996332241643088627789-878999966898968897434358
Q gi|254780197|r 174 G-TGR-VPAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVD-VANAEDFSLIENIDGLLVGGASLQ 239 (264)
Q Consensus 174 G-tG~-~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~-~~N~~~l~~~~~iDG~LVG~ASl~ 239 (264)
| ||. ..-++++.+..+.||+. .++||+.|-.|+ ++.++++++ ...||+-||+|-.+
T Consensus 167 GvTG~~~~~~~~~~~~i~~iK~~---------t~~Pv~vGFGI~t~e~v~~~~~-~~ADGVIVGSaiV~ 225 (248)
T 1geq_A 167 GTTGAREEIPKTAYDLLRRAKRI---------CRNKVAVGFGVSKREHVVSLLK-EGANGVVVGSALVK 225 (248)
T ss_dssp -------CCCHHHHHHHHHHHHH---------CSSCEEEESCCCSHHHHHHHHH-TTCSEEEECHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHCC---------CCCCEEEEECCCCHHHHHHHHH-CCCCEEEECHHHHH
T ss_conf 55787754320257788875104---------6786379824699999999987-48999998889999
No 42
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2- epimerase; structural genomics, PSI, protein structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=85.29 E-value=1.1 Score=23.60 Aligned_cols=38 Identities=18% Similarity=0.412 Sum_probs=32.9
Q ss_pred CCCEEEECCCC-CHHHHHHHHCCCCCCEEEECHHHCCHHH
Q ss_conf 64308862778-9878999966898968897434358899
Q gi|254780197|r 204 QKMRILYGGSV-DVANAEDFSLIENIDGLLVGGASLQHEL 242 (264)
Q Consensus 204 ~~i~ilYGGSV-~~~N~~~l~~~~~iDG~LVG~ASl~~~~ 242 (264)
..+|++-+|.| +++.+...+.. ..||++||+|=.+|++
T Consensus 185 ~~ipvia~GGI~~~~d~~~al~~-GAdgV~vGsAi~~p~~ 223 (234)
T 1yxy_A 185 AGIAVIAEGKIHSPEEAKKINDL-GVAGIVVGGAITRPKE 223 (234)
T ss_dssp TTCCEEEESCCCSHHHHHHHHTT-CCSEEEECHHHHCHHH
T ss_pred CCCCEEEECCCCCHHHHHHHHHC-CCCEEEECHHHCCHHH
T ss_conf 79818987999999999999986-9999998935459899
No 43
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=84.78 E-value=1.7 Score=22.54 Aligned_cols=51 Identities=8% Similarity=0.047 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHC-CHH
Q ss_conf 124554467999999633224164308862778987899996689896889743435-889
Q gi|254780197|r 182 VDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASL-QHE 241 (264)
Q Consensus 182 ~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl-~~~ 241 (264)
....+..+.||+. -+++|+.+|..+++.+.+.+....+|-+.+||+.+ ||+
T Consensus 305 ~~~~~~~~~ir~~---------~~~pvi~~G~~~~~~a~~~l~~G~~DlV~~gR~~iaDPd 356 (402)
T 2hsa_B 305 EEEARLMRTLRNA---------YQGTFICSGGYTRELGIEAVAQGDADLVSYGRLFISNPD 356 (402)
T ss_dssp HHHHHHHHHHHHH---------CSSCEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHCTT
T ss_pred HHHHHHHHHHHHH---------CCCCEEEECCCCHHHHHHHHHCCCCEEHHHHHHHHHCCH
T ss_conf 0248999999985---------489889848989899999998599607244199887922
No 44
>2i1o_A Nicotinate phosphoribosyltransferase; ZIN ION, zinc finger motif, structural genomics, PSI, protein structure initiative; 2.40A {Thermoplasma acidophilum} PDB: 1ytd_A* 1yte_A* 1ytk_A
Probab=83.96 E-value=2.3 Score=21.66 Aligned_cols=53 Identities=19% Similarity=0.253 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCC
Q ss_conf 245544679999996332241643088627789878999966898968897434358
Q gi|254780197|r 183 DLEKIHSFVRRILLDRFPEEGQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQ 239 (264)
Q Consensus 183 ~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~ 239 (264)
+..+....+|+.+.+. ...+++|..+|++|++|+.+|... .+|.+=||+.-.+
T Consensus 251 d~~~l~~~~r~~Ld~~---g~~~v~I~~Sggi~~~~I~~l~~~-gvD~~GvGt~l~~ 303 (398)
T 2i1o_A 251 NFEALIREVRWELALR---GRSDIKIMVSGGLDENTVKKLREA-GAEAFGVGTSISS 303 (398)
T ss_dssp CHHHHHHHHHHHHHHT---TCTTSEEEEESSCCHHHHHHHHHT-TCCEEEECHHHHT
T ss_pred CHHHHHHHHHHHHHHC---CCCCEEEEEECCCCHHHHHHHHHC-CCCEEEECCCCCC
T ss_conf 7999999999987546---898549999699999999999963-9988974465056
No 45
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius}
Probab=82.91 E-value=2.4 Score=21.53 Aligned_cols=58 Identities=21% Similarity=0.082 Sum_probs=43.4
Q ss_pred CCCCCCC---CCHHHHHHHCCCCEEE--------CCHHCCCCC---CCCHHHHHHHHHHHHHCCCCEEEECC
Q ss_conf 3343321---2067775407310010--------420002213---57999999999999833474799816
Q gi|254780197|r 74 YGPYTGD---ISANMLADCGANFVIL--------GHSERRIGH---REDSYVVQSKVKSACNAGLYPIVCIG 131 (264)
Q Consensus 74 ~GA~TGe---iSa~mL~d~g~~~vii--------GHSERR~~~---~E~d~~I~~K~~~al~~~l~pIlCiG 131 (264)
.|.|..+ -+..+|++.|+++|.+ .+|+.=.+. ..+|+.|...+..|.+.||.++|.-+
T Consensus 47 ~g~~~~~~a~~~l~~m~~~G~N~Vrl~~~~~q~~~~s~~~~~~~~~t~~de~v~~~i~~Ak~~GLkV~L~P~ 118 (343)
T 3civ_A 47 HGTWGTDEARASMRALAEQPFNWVTLAFAGLMEHPGDPAIAYGPPVTVSDDEIASMAELAHALGLKVCLKPT 118 (343)
T ss_dssp TTGGGSHHHHHHHHHHHHSSCSEEEEEEEEEESSTTCCCCBCSTTTBCCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEEE
T ss_conf 885488899999999998599889996100358998883003689984889999999999976987998624
No 46
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, amino-acid biosynthesis cobalamin, precorrin, novel fold; 2.10A {Thermotoga maritima}
Probab=81.18 E-value=1.1 Score=23.58 Aligned_cols=137 Identities=14% Similarity=0.019 Sum_probs=65.2
Q ss_pred CHHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHH-HC---CCCEEEECCCCCHHHHCCCCCCCCC-------CCH
Q ss_conf 067775407310010420002213579999999999998-33---4747998165520333498000111-------002
Q gi|254780197|r 82 SANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSAC-NA---GLYPIVCIGETDEEYRSGRTFEVLQ-------KQL 150 (264)
Q Consensus 82 Sa~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al-~~---~l~pIlCiGE~~~e~~~~~~~~~l~-------~Ql 150 (264)
.+..+-+.|++.|++|-+= .+....+. .+..+. +. .-.++++|--.. ..+++.-+.. --+
T Consensus 88 d~~~ll~~GadkVii~s~~-----~~~~~~~~-~i~~~~~~~gg~~q~IvvsiD~k~---~~~~~~i~~~~~~~~~~~~~ 158 (266)
T 2w6r_A 88 HFLEAFLAGADKALAASVF-----HFREIDMR-ELKEYLKKHGGSGQAVVVAIDAKR---VDGEFMVFTHSGKKNTGILL 158 (266)
T ss_dssp HHHHHHHHTCSEEECCCCC-----------CH-HHHHHCC----CCCEEEEEEEEEE---ETTEEEEEETTTTEEEEEEH
T ss_pred CHHHHHHHHHHHEEECCCC-----CCCCHHHH-HHHHHHHHHCCCCEEEEEEEEEEE---CCCCEEEEECCCCCCCCCCC
T ss_conf 1003332200000113322-----45511226-678999985898649999987675---27955899767850168720
Q ss_pred HHHHHCCCCCCCCEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCH-HHHHHHHCCCCCC
Q ss_conf 221000000134113205135304557643112455446799999963322416430886277898-7899996689896
Q gi|254780197|r 151 DCSLPSEFKSSVPVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVDV-ANAEDFSLIENID 229 (264)
Q Consensus 151 ~~~l~~~~~~~~~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~-~N~~~l~~~~~iD 229 (264)
...+....+..---|-+--|=-=||+.-++.+.++++... .++|++|+|.++. +...++++. ++|
T Consensus 159 ~~~~~~~~~~g~geil~t~V~~DGt~~G~d~~l~~~i~~~-------------~~~piI~sGGi~s~~di~~l~~~-g~~ 224 (266)
T 2w6r_A 159 RDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPL-------------TTLPIIASGGAGKMEHFLEAFLA-GAD 224 (266)
T ss_dssp HHHHHHHHHTTCSEEEEEETTTTTTCSCCCHHHHHHHGGG-------------CCSCEEEESCCCSHHHHHHHHHH-TCS
T ss_pred HHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHC-------------CCCCEEEEECCCCHHHHHHHHHC-CCC
T ss_conf 2335433155858589988878798688767999999861-------------89778999479999999999978-997
Q ss_pred EEEECHHHCCHH
Q ss_conf 889743435889
Q gi|254780197|r 230 GLLVGGASLQHE 241 (264)
Q Consensus 230 G~LVG~ASl~~~ 241 (264)
|+.+|+|-..-+
T Consensus 225 gvi~gs~~~~~~ 236 (266)
T 2w6r_A 225 AALAASVFHFRE 236 (266)
T ss_dssp EEEESTTTC---
T ss_pred EEEEEEHHHCCC
T ss_conf 999800556599
No 47
>2x8r_A Glycosyl hydrolase; peptidoglycan cleavage, endo-N-acetylmuramidases, motif; 1.70A {Aspergillus fumigatus}
Probab=81.14 E-value=3 Score=20.99 Aligned_cols=49 Identities=22% Similarity=0.223 Sum_probs=40.0
Q ss_pred CCCCCCCHHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEE
Q ss_conf 4332120677754073100104200022135799999999999983347479
Q gi|254780197|r 76 PYTGDISANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPI 127 (264)
Q Consensus 76 A~TGeiSa~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pI 127 (264)
.|-|.|....++..|+++|+|-=+|-..+ .|.....-++.|.++||.+=
T Consensus 11 ~~qg~idw~~~k~~gv~fviikateG~~~---~D~~~~~n~~~a~~aGl~~G 59 (210)
T 2x8r_A 11 NHQKSVNFEAAKKDGAQFVMIKATEGTTY---KDTVFNSHYTGATKAGLLRG 59 (210)
T ss_dssp TTCSCCCHHHHHHTTEEEEEEEEEETTTE---ECTTHHHHHHHHHHTTCEEE
T ss_pred CCCCCCCHHHHHHCCCEEEEEEEECCCCC---CCHHHHHHHHHHHHCCCEEE
T ss_conf 87897899999877990999999528885---78679999999998699389
No 48
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, degradation of homoprotocatechuate, class II aldolase; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=80.33 E-value=2.6 Score=21.35 Aligned_cols=174 Identities=17% Similarity=0.232 Sum_probs=85.8
Q ss_pred HHHHHCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCC
Q ss_conf 99973257631022201222333433212067775407310010420002213579999999999998334747998165
Q gi|254780197|r 53 SSRLCKTSSVIIGAQDCHIAEYGPYTGDISANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGE 132 (264)
Q Consensus 53 ~~~~~~~s~I~igAQnv~~~~~GA~TGeiSa~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE 132 (264)
+.+.++.....+|..-. ......++++...|.+|++|- -|.- .=+-+.+..-+..+...++.|++=|..
T Consensus 9 lk~kL~~g~~~~G~~~~-------~~sp~~~e~l~~~G~Dfv~iD-~EHg---~~~~~~~~~~i~a~~~~g~~~~vRvp~ 77 (267)
T 2vws_A 9 FKERLRKGEVQIGLWLS-------STTAYMAEIAATSGYDWLLID-GEHA---PNTIQDLYHQLQAVAPYASQPVIRPVE 77 (267)
T ss_dssp HHHHHHTTCCEEEEEEC-------SCCHHHHHHHHTTCCSEEEEE-TTTS---CCCHHHHHHHHHHHTTSSSEEEEECSS
T ss_pred HHHHHHCCCCEEEEEEC-------CCCHHHHHHHHHCCCCEEEEC-CCCC---CCCHHHHHHHHHHHHCCCCCCEEEECC
T ss_conf 99999879987998878-------999799999983798999981-6689---888999999998861469974587147
Q ss_pred CCHHHHCCCCCCCCCCCHHHHHHCCCCC--------CCC--EEEECHHHHHCC-CCCC---CCHHHHHHHHHHHHHHHHH
Q ss_conf 5203334980001110022210000001--------341--132051353045-5764---3112455446799999963
Q gi|254780197|r 133 TDEEYRSGRTFEVLQKQLDCSLPSEFKS--------SVP--VIAYEPIWAIGT-GRVP---AVVDLEKIHSFVRRILLDR 198 (264)
Q Consensus 133 ~~~e~~~~~~~~~l~~Ql~~~l~~~~~~--------~~~--iIAYEPvWAIGt-G~~a---~~~~i~~~~~~Ir~~l~~~ 198 (264)
... ..+++-|+.+..++.-. +.+ ..=|-|. |+ |-.+ ....-.....+.+..-.+.
T Consensus 78 ~~~--------~~i~r~LD~Ga~GIivP~v~s~eea~~~v~~~rypP~---G~Rg~~~~~~~~~~~~~~~~y~~~~n~~~ 146 (267)
T 2vws_A 78 GSK--------PLIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPY---GERGVGASVARAARWGRIENYMAQVNDSL 146 (267)
T ss_dssp CCH--------HHHHHHHHTTCCEEEECCCCSHHHHHHHHHHTSCTTT---SCCCSCGGGSGGGGGGTSTTHHHHHHHHC
T ss_pred CCH--------HHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCC---CCCCCCCCCCCCCCCCCHHHHHHHHHHHC
T ss_conf 847--------9999998389988998994999999999998606999---99988765332124676368999998642
Q ss_pred CCHHHCCCEE-EECCCCCHHHHHHHHCCCCCCEEEECHHHCC----------HHHHHHHHHHHHHHHH
Q ss_conf 3224164308-8627789878999966898968897434358----------8999999999999999
Q gi|254780197|r 199 FPEEGQKMRI-LYGGSVDVANAEDFSLIENIDGLLVGGASLQ----------HELFLKIVEIVERVYV 255 (264)
Q Consensus 199 ~~~~~~~i~i-lYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~----------~~~F~~Ii~~~~~~~~ 255 (264)
+.+ .==-----+|+++|++.|+||+++||-+=|. -.++.+.++-+.++-.
T Consensus 147 -------~vi~qIEt~~av~nleeI~av~GvD~i~iGp~DLS~slG~pg~~~~p~v~~ai~~v~~~~~ 207 (267)
T 2vws_A 147 -------CLLVQVESKTALDNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIR 207 (267)
T ss_dssp -------EEEEECCSHHHHHTHHHHHTSTTCCEEEECHHHHHHHTTCSSSCCTHHHHHHHHHHHHHHH
T ss_pred -------CCHHCCCCHHHHHHHHHHHCCCCCCEEEECCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf -------2202026699999799874568985356780778873399988998368999999999999
No 49
>2i14_A Nicotinate-nucleotide pyrophosphorylase; ligand binding, phosphoribosylpyrophosphate, Zn metal ION, structural genomics, PSI; HET: PCP; 2.90A {Pyrococcus furiosus} SCOP: c.1.17.1 d.41.2.1
Probab=80.07 E-value=2.7 Score=21.21 Aligned_cols=51 Identities=27% Similarity=0.342 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHC
Q ss_conf 24554467999999633224164308862778987899996689896889743435
Q gi|254780197|r 183 DLEKIHSFVRRILLDRFPEEGQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASL 238 (264)
Q Consensus 183 ~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl 238 (264)
+.......+|..+.+. ...+++|+++|+++++|+.+|... ||.+=||+.-.
T Consensus 249 d~~~l~~~~r~~ld~~---g~~~v~I~~SggI~~~~i~~~~~~--iD~~gvGt~l~ 299 (395)
T 2i14_A 249 NFRKIIEEVRWELKVR---GYDWVKIFVSGGLDEEKIKEIVDV--VDAFGVGGAIA 299 (395)
T ss_dssp CHHHHHHHHHHHHHHT---TCCSCEEEEESSCCHHHHHTTGGG--CSEEEECHHHH
T ss_pred CHHHHHHHHHHHHHCC---CCCCEEEEEECCCCHHHHHHHHHH--CCEEEECCCCC
T ss_conf 3999999999986215---898569999799799999999964--78975465226
No 50
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=79.59 E-value=3.3 Score=20.67 Aligned_cols=146 Identities=14% Similarity=0.080 Sum_probs=73.1
Q ss_pred CHHHHHHHCCCCEEE--CCH-----------HCCCC-CCCC--------HHHHHHHHHHHHHCCCCEEEECCCCCHHHHC
Q ss_conf 067775407310010--420-----------00221-3579--------9999999999983347479981655203334
Q gi|254780197|r 82 SANMLADCGANFVIL--GHS-----------ERRIG-HRED--------SYVVQSKVKSACNAGLYPIVCIGETDEEYRS 139 (264)
Q Consensus 82 Sa~mL~d~g~~~vii--GHS-----------ERR~~-~~E~--------d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~ 139 (264)
+|...++.|.+.|.| +|- =+|.. ++-+ .++| .-++.+.-.++ +++.+--..+..+.
T Consensus 172 AA~rA~~AGfDgVEIH~aHGyLl~qFlSp~~N~RtD~YGGs~eNR~Rf~lEii-~aIr~~vg~~~-i~~r~~~~~~~~~g 249 (376)
T 1icp_A 172 AARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIV-EAVANEIGSDR-VGIRISPFAHYNEA 249 (376)
T ss_dssp HHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHH-HHHHHHHCGGG-EEEEECTTCCTTTC
T ss_pred HHHHHHHHCCCEEEEECCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH-HHHHHHCCCCC-EEEEECCHHHCCCC
T ss_conf 99999981999699711303289871376579986888887899879899999-99998608865-57885151012478
Q ss_pred CCCCCCC-CCCHHHHHHCCCCCCCCEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCHHH
Q ss_conf 9800011-100222100000013411320513530455764311245544679999996332241643088627789878
Q gi|254780197|r 140 GRTFEVL-QKQLDCSLPSEFKSSVPVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVDVAN 218 (264)
Q Consensus 140 ~~~~~~l-~~Ql~~~l~~~~~~~~~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~~N 218 (264)
+.+.+.. .-++...+... . +.|--++.-.......+.+..+....||+. -+++++.+|..+++.
T Consensus 250 g~~~~~~~~~~~~~~l~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~---------~~~pvi~~G~~~~~~ 314 (376)
T 1icp_A 250 GDTNPTALGLYMVESLNKY---D---LAYCHVVEPRMKTAWEKIECTESLVPMRKA---------YKGTFIVAGGYDRED 314 (376)
T ss_dssp CCSCHHHHHHHHHHHHGGG---C---CSEEEEECCSCCC------CCCCSHHHHHH---------CCSCEEEESSCCHHH
T ss_pred CCCCHHHHHHHHHHHHHHC---C---EEEEEEECCCCCCCCCCCCCHHHHHHHHHH---------CCCCEEEECCCCHHH
T ss_conf 8852789999999986410---2---345666347654455555447889999986---------378779978989999
Q ss_pred HHHHHCCCCCCEEEECHHHC-CHHHHHH
Q ss_conf 99996689896889743435-8899999
Q gi|254780197|r 219 AEDFSLIENIDGLLVGGASL-QHELFLK 245 (264)
Q Consensus 219 ~~~l~~~~~iDG~LVG~ASl-~~~~F~~ 245 (264)
+++.+....+|-+-+||+.+ ||+ |.+
T Consensus 315 ae~~l~~g~aDlV~~gR~~laDP~-~~~ 341 (376)
T 1icp_A 315 GNRALIEDRADLVAYGRLFISNPD-LPK 341 (376)
T ss_dssp HHHHHHTTSCSEEEESHHHHHCTT-HHH
T ss_pred HHHHHHCCCCCCHHHHHHHHHCCH-HHH
T ss_conf 999998799775375399997930-999
No 51
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=79.48 E-value=3.3 Score=20.65 Aligned_cols=144 Identities=16% Similarity=0.168 Sum_probs=85.0
Q ss_pred HHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCCCCCC
Q ss_conf 67775407310010420002213579999999999998334747998165520333498000111002221000000134
Q gi|254780197|r 83 ANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEFKSSV 162 (264)
Q Consensus 83 a~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~~~~~ 162 (264)
...+.+.|++++.+ |.|-- ...+..-+..+.+.|..+=+.+.-... .+ ++...+........
T Consensus 80 i~~~~~~g~~~i~~-H~E~~------~~~~~~~i~~i~~~g~k~Gial~p~t~-------~~----~~~~~l~~~~~~d~ 141 (228)
T 1h1y_A 80 VEPLAKAGASGFTF-HIEVS------RDNWQELIQSIKAKGMRPGVSLRPGTP-------VE----EVFPLVEAENPVEL 141 (228)
T ss_dssp HHHHHHHTCSEEEE-EGGGC------TTTHHHHHHHHHHTTCEEEEEECTTSC-------GG----GGHHHHHSSSCCSE
T ss_pred HHHHHHCCCCEEEE-ECCCC------CCCHHHHHHHHHHCCCCEEEEECCCCC-------HH----HHHHHHHHHCCCCE
T ss_conf 99998569977996-05002------358999999999749731158448998-------89----99999865314565
Q ss_pred -CEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCHH
Q ss_conf -1132051353045576431124554467999999633224164308862778987899996689896889743435889
Q gi|254780197|r 163 -PVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQHE 241 (264)
Q Consensus 163 -~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~~ 241 (264)
++..-+|-++ |+.-.++ +...||+. ++.+ .+++|-=-|+||.+|+.++.+ .++|.+-+|+|=...+
T Consensus 142 vlim~V~PG~~---GQ~f~~~----~l~kI~~l-~~~~----~~~~I~VDGGI~~~~i~~l~~-aGad~iV~GSaif~~~ 208 (228)
T 1h1y_A 142 VLVMTVEPGFG---GQKFMPE----MMEKVRAL-RKKY----PSLDIEVDGGLGPSTIDVAAS-AGANCIVAGSSIFGAA 208 (228)
T ss_dssp EEEESSCTTCS---SCCCCGG----GHHHHHHH-HHHC----TTSEEEEESSCSTTTHHHHHH-HTCCEEEESHHHHTSS
T ss_pred EEEEEECCCCC---CCCCCCH----HHHHHHHH-HHCC----CCCEEEEECCCCHHHHHHHHH-CCCCEEEECHHHHCCC
T ss_conf 78998558988---8635704----78999999-9669----986499966869888999998-6999999776987899
Q ss_pred HHHHHHHHHHHHHHHH
Q ss_conf 9999999999999984
Q gi|254780197|r 242 LFLKIVEIVERVYVDS 257 (264)
Q Consensus 242 ~F~~Ii~~~~~~~~~~ 257 (264)
+..+.++..+++.-.+
T Consensus 209 d~~~~i~~lr~~i~~~ 224 (228)
T 1h1y_A 209 EPGEVISALRKSVEGS 224 (228)
T ss_dssp CHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHH
T ss_conf 9999999999999987
No 52
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=79.42 E-value=1.7 Score=22.47 Aligned_cols=32 Identities=28% Similarity=0.583 Sum_probs=28.1
Q ss_pred CCCEEEECCCC-CHHHHHHHHCCCCCCEEEECHHH
Q ss_conf 64308862778-98789999668989688974343
Q gi|254780197|r 204 QKMRILYGGSV-DVANAEDFSLIENIDGLLVGGAS 237 (264)
Q Consensus 204 ~~i~ilYGGSV-~~~N~~~l~~~~~iDG~LVG~AS 237 (264)
.++|+.+|+.+ +++.++++.+. -||+-||+|=
T Consensus 189 ~~~Pv~VGFGIss~e~a~~i~~~--ADgvIVGSai 221 (234)
T 2f6u_A 189 DKARLFYGGGIDSREKAREMLRY--ADTIIVGNVI 221 (234)
T ss_dssp SSSEEEEESCCCSHHHHHHHHHH--SSEEEECHHH
T ss_pred CCCCEEEECCCCCHHHHHHHHHH--CCEEEECHHH
T ss_conf 79839998995999999999961--9989999599
No 53
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/proteomics initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus HB8} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=78.62 E-value=3.6 Score=20.48 Aligned_cols=53 Identities=21% Similarity=0.267 Sum_probs=35.5
Q ss_pred CCC-CCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCC-HHHHHHHHCCCCCCEEEECHHHCC
Q ss_conf 557-64311245544679999996332241643088627789-878999966898968897434358
Q gi|254780197|r 175 TGR-VPAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVD-VANAEDFSLIENIDGLLVGGASLQ 239 (264)
Q Consensus 175 tG~-~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~-~~N~~~l~~~~~iDG~LVG~ASl~ 239 (264)
||. ..-+.++.+..+.||+. .++||+.|=.|+ ++-++.+ ...||+-||+|-++
T Consensus 180 TG~~~~~~~~~~~~i~~ik~~---------t~~Pv~vGFGI~t~e~~~~~---~~ADGvIVGSa~v~ 234 (271)
T 1ujp_A 180 TGMRERLPEEVKDLVRRIKAR---------TALPVAVGFGVSGKATAAQA---AVADGVVVGSALVR 234 (271)
T ss_dssp ---------CCHHHHHHHHTT---------CCSCEEEESCCCSHHHHHHH---TTSSEEEECHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHCC---------CCCCEEEECCCCCHHHHHHH---CCCCEEEECHHHHH
T ss_conf 776655523589999875105---------68975998077988999874---68998998599999
No 54
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=77.94 E-value=3.7 Score=20.36 Aligned_cols=135 Identities=19% Similarity=0.195 Sum_probs=76.5
Q ss_pred HHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCCCCCC
Q ss_conf 67775407310010420002213579999999999998334747998165520333498000111002221000000134
Q gi|254780197|r 83 ANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEFKSSV 162 (264)
Q Consensus 83 a~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~~~~~ 162 (264)
++....+|++.+=+|-.... . ...+.+..++....|+... ++-. ... ...-
T Consensus 79 ~~lA~~~~adGvHl~~~~~~---------~--~~~~~~~~~~~ig~s~h~~-~e~~-------------~a~----~~g~ 129 (215)
T 1xi3_A 79 VDVALAVDADGVQLGPEDMP---------I--EVAKEIAPNLIIGASVYSL-EEAL-------------EAE----KKGA 129 (215)
T ss_dssp HHHHHHHTCSEEEECTTSCC---------H--HHHHHHCTTSEEEEEESSH-HHHH-------------HHH----HHTC
T ss_pred HHHHHHHCCCEEEECCCCCH---------H--HHHHHHCCCCEEEECCCHH-HHHH-------------HHH----HCCC
T ss_conf 99998736888970310101---------6--7776515781898506659-9999-------------998----7699
Q ss_pred CEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCHHH
Q ss_conf 11320513530455764311245544679999996332241643088627789878999966898968897434358899
Q gi|254780197|r 163 PVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQHEL 242 (264)
Q Consensus 163 ~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~~~ 242 (264)
-.|..-|+..--|.....|... ..++++... -++|++==|.++++|+.++... +.||+-++++=+..++
T Consensus 130 DYi~~gpvf~T~sk~~~~~~g~----~~l~~~~~~------~~~Pv~AiGGI~~~ni~~~~~~-Ga~giAvisaI~~~~d 198 (215)
T 1xi3_A 130 DYLGAGSVFPTKTKEDARVIGL----EGLRKIVES------VKIPVVAIGGINKDNAREVLKT-GVDGIAVISAVMGAED 198 (215)
T ss_dssp SEEEEECSSCC----CCCCCHH----HHHHHHHHH------CSSCEEEESSCCTTTHHHHHTT-TCSEEEESHHHHTSSS
T ss_pred CEEEECCCCCCCCCCCCCCCCH----HHHHHHHHH------CCCCCEEECCCCHHHHHHHHHC-CCCEEEEHHHHHCCCC
T ss_conf 8899624430688888887658----899999873------5798278779999999999980-9989997299777999
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 999999999999984
Q gi|254780197|r 243 FLKIVEIVERVYVDS 257 (264)
Q Consensus 243 F~~Ii~~~~~~~~~~ 257 (264)
....++.++++.-+.
T Consensus 199 p~~~~~~l~~~~~~~ 213 (215)
T 1xi3_A 199 VRKATEELRKIVEEV 213 (215)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
T ss_conf 999999999999996
No 55
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=77.60 E-value=2.3 Score=21.65 Aligned_cols=38 Identities=16% Similarity=0.142 Sum_probs=34.2
Q ss_pred CCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHC-CHH
Q ss_conf 64308862778987899996689896889743435-889
Q gi|254780197|r 204 QKMRILYGGSVDVANAEDFSLIENIDGLLVGGASL-QHE 241 (264)
Q Consensus 204 ~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl-~~~ 241 (264)
-.++++++|.++++.++++++...+|-+.+||+.+ ||+
T Consensus 292 ~~~pvi~~G~~~~e~ae~~l~~g~~DlV~~gR~lladPd 330 (365)
T 2gou_A 292 YQGVLIYAGRYNAEKAEQAINDGLADMIGFGRPFIANPD 330 (365)
T ss_dssp CCSEEEEESSCCHHHHHHHHHTTSCSEEECCHHHHHCTT
T ss_pred CCCEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHCCC
T ss_conf 688099978969999999998799764898899997900
No 56
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=76.91 E-value=2.5 Score=21.41 Aligned_cols=164 Identities=14% Similarity=0.171 Sum_probs=76.6
Q ss_pred EEECCHHHHHHHHHHHCCCCCCH------HHHHCCCCCCCCCCCCCCHHHHHHHCCCCEEEC--CHHCCCCCCCCHHHHH
Q ss_conf 99689655999999732576310------222012223334332120677754073100104--2000221357999999
Q gi|254780197|r 42 AICPPATLIYESSRLCKTSSVII------GAQDCHIAEYGPYTGDISANMLADCGANFVILG--HSERRIGHREDSYVVQ 113 (264)
Q Consensus 42 vi~Pp~~~L~~~~~~~~~s~I~i------gAQnv~~~~~GA~TGeiSa~mL~d~g~~~viiG--HSERR~~~~E~d~~I~ 113 (264)
.+.|++-.+..+.+.+...+|.+ -+++..+...---+=.-....++++|++.+-+| |+|.+ -|....
T Consensus 35 GlTPs~~~i~~~~~~~~~~~ipV~vMIRPr~g~F~y~~~e~~~m~~dI~~~~~~GadgiVfG~L~~d~~-----id~~~~ 109 (224)
T 2bdq_A 35 GTTPSYGVIKEANQYLHEKGISVAVMIRPRGGNFVYNDLELRIMEEDILRAVELESDALVLGILTSNNH-----IDTEAI 109 (224)
T ss_dssp CBCCCHHHHHHHHHHHHHTTCEEEEECCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTSS-----BCHHHH
T ss_pred CCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC-----CCHHHH
T ss_conf 979999999999986033799869996138998676889999999999999981998027987767777-----159999
Q ss_pred HHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCC--CCCHHHHHHCCCCCCCCEEEECHHHHHC-CCCCCCCHHHHHHHHH
Q ss_conf 999999833474799816552033349800011--1002221000000134113205135304-5576431124554467
Q gi|254780197|r 114 SKVKSACNAGLYPIVCIGETDEEYRSGRTFEVL--QKQLDCSLPSEFKSSVPVIAYEPIWAIG-TGRVPAVVDLEKIHSF 190 (264)
Q Consensus 114 ~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l--~~Ql~~~l~~~~~~~~~iIAYEPvWAIG-tG~~a~~~~i~~~~~~ 190 (264)
+++..+. .++ ++.+- +..+.+ ..|++ .+..+... .+=-++ +|.... ..+.+-...
T Consensus 110 ~~li~~~-~~~-~vtfH----------rA~D~~~~~~~~~-~l~~l~~l--------gv~~iltsGg~~~-~~~~~~i~~ 167 (224)
T 2bdq_A 110 EQLLPAT-QGL-PLVFH----------MAFDVIPKSDQKK-SIDQLVAL--------GFTRILLHGSSNG-EPIIENIKH 167 (224)
T ss_dssp HHHHHHH-TTC-CEEEC----------GGGGGSCTTTHHH-HHHHHHHT--------TCCEEEECSCSSC-CCGGGGHHH
T ss_pred HHHHHHC-CCC-CCEEE----------CCCCHHHHHHHHH-HHHHHHHC--------CCCCCCCCCCCCC-HHHHHHHHH
T ss_conf 9999980-899-80562----------6756555653999-99999966--------9853244588654-349999999
Q ss_pred HHHHHHHHCCHHHCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHH
Q ss_conf 99999963322416430886277898789999668989688974343
Q gi|254780197|r 191 VRRILLDRFPEEGQKMRILYGGSVDVANAEDFSLIENIDGLLVGGAS 237 (264)
Q Consensus 191 Ir~~l~~~~~~~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~AS 237 (264)
+|+.+.. .+.++.|+=||.|+++|+.++.+...++-+= |+|.
T Consensus 168 L~~l~~~----~~~~i~I~vgGGI~~~Ni~~l~~~~g~~~~H-gsai 209 (224)
T 2bdq_A 168 IKALVEY----ANNRIEIMVGGGVTAENYQYICQETGVKQAH-GTRI 209 (224)
T ss_dssp HHHHHHH----HTTSSEEEECSSCCTTTHHHHHHHHTCCEEE-ETTC
T ss_pred HHHHHHH----CCCCCEEEECCCCCHHHHHHHHHHHCCCEEE-EEEE
T ss_conf 9999996----0999189977997999999999965992898-7103
No 57
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=76.27 E-value=4.1 Score=20.07 Aligned_cols=159 Identities=16% Similarity=0.257 Sum_probs=81.7
Q ss_pred HHHHHCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCC
Q ss_conf 99973257631022201222333433212067775407310010420002213579999999999998334747998165
Q gi|254780197|r 53 SSRLCKTSSVIIGAQDCHIAEYGPYTGDISANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGE 132 (264)
Q Consensus 53 ~~~~~~~s~I~igAQnv~~~~~GA~TGeiSa~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE 132 (264)
+.+.+++.+..+|..-.. .....++++...|.+|++|-. |.- .=+.+.+..-+.++...|+.|++=|.+
T Consensus 10 lk~~l~~g~~~~G~~~~~-------~sp~~~ei~a~~G~Dfv~iD~-EHg---~~~~~~~~~~i~a~~~~g~~~~VRvp~ 78 (256)
T 1dxe_A 10 FKAALAAKQVQIGCWSAL-------SNPISTEVLGLAGFDWLVLDG-EHA---PNDISTFIPQLMALKGSASAPVVRVPT 78 (256)
T ss_dssp HHHHHHTTCCEEEEEECS-------CSHHHHHHHTTSCCSEEEEES-SSS---SCCHHHHHHHHHHTTTCSSEEEEECSS
T ss_pred HHHHHHCCCCEEEEEECC-------CCHHHHHHHHHCCCCEEEEEC-CCC---CCCHHHHHHHHHHHHCCCCCCEEECCC
T ss_conf 999998799669987578-------997999999817999899826-879---886777999999997179983885688
Q ss_pred CCHHHHCCCCCCCCCCCHHHHHHCCCC--------CCCC--EEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHH
Q ss_conf 520333498000111002221000000--------1341--132051353045576431124554467999999633224
Q gi|254780197|r 133 TDEEYRSGRTFEVLQKQLDCSLPSEFK--------SSVP--VIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEE 202 (264)
Q Consensus 133 ~~~e~~~~~~~~~l~~Ql~~~l~~~~~--------~~~~--iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~ 202 (264)
... ..+++=|+.+..++.- .+.+ ..=|-|..-=|-|-......-...-.+.+..
T Consensus 79 ~~~--------~~i~~~LD~Ga~GiivP~V~s~eea~~~v~~~rypP~G~Rg~~~~~~~~~~~~~~~~~~~~-------- 142 (256)
T 1dxe_A 79 NEP--------VIIKRLLDIGFYNFLIPFVETKEEAELAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQS-------- 142 (256)
T ss_dssp SCH--------HHHHHHHHTTCCEEEESCCCSHHHHHHHHHTTSCTTTCCCCCCSSSGGGGGGTSTTHHHHH--------
T ss_pred CCH--------HHHHHHHCCCCCEEEECCCCCHHHHHHHHHHEEECCCCCCCCCCCHHHHCCCCCHHHHHHH--------
T ss_conf 999--------9999987189897772786999999999974577999987877320222135212789998--------
Q ss_pred HCCCE--EEECCCCCHHHHHHHHCCCCCCEEEECHHHC
Q ss_conf 16430--8862778987899996689896889743435
Q gi|254780197|r 203 GQKMR--ILYGGSVDVANAEDFSLIENIDGLLVGGASL 238 (264)
Q Consensus 203 ~~~i~--ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl 238 (264)
.+++- +.==.----+|+++|++.|+||+++||-+=|
T Consensus 143 n~~~~vi~qIEt~~av~nldeI~av~GvD~i~iGp~DL 180 (256)
T 1dxe_A 143 NKNITILVQIESQQGVDNVDAIAATEGVDGIFVGPSDL 180 (256)
T ss_dssp TTSCEEEEEECSHHHHHTHHHHHTSTTCCEEEECHHHH
T ss_pred HHCCEEHHHHCCHHHHHHHHHHHCCCCCCEEEECHHHH
T ss_conf 43234102111678998788860578985256774889
No 58
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 1g6c_A* 1g4e_A* 1g69_A* 1g4s_A* 1g4p_A* 1g67_A*
Probab=74.62 E-value=4.6 Score=19.80 Aligned_cols=80 Identities=18% Similarity=0.218 Sum_probs=50.9
Q ss_pred EEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCH---
Q ss_conf 13205135304557643112455446799999963322416430886277898789999668989688974343588---
Q gi|254780197|r 164 VIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQH--- 240 (264)
Q Consensus 164 iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~--- 240 (264)
.+..-|++.-.|...+.+..-.+ .++.+... ..++||+==|.++++|+.++... +.||+-|.++=+.+
T Consensus 139 Yv~~gpvf~T~sK~~~~~~~g~~---~~~~~~~~-----~~~iPv~AiGGI~~~n~~~~~~~-Ga~gvAvis~I~~a~dp 209 (227)
T 2tps_A 139 YVGLGPIYPTETKKDTRAVQGVS---LIEAVRRQ-----GISIPIVGIGGITIDNAAPVIQA-GADGVSMISAISQAEDP 209 (227)
T ss_dssp EEEECCSSCCCSSSSCCCCCTTH---HHHHHHHT-----TCCCCEEEESSCCTTTSHHHHHT-TCSEEEESHHHHTSSCH
T ss_pred EEEECCCCCCCCCCCCCCCCCHH---HHHHHHHH-----CCCCCEEEECCCCHHHHHHHHHH-CCCEEEEEHHHHCCCCH
T ss_conf 79854750046677542234047---88999985-----57998798778899999999983-99889982997679999
Q ss_pred ----HHHHHHHHHHHH
Q ss_conf ----999999999999
Q gi|254780197|r 241 ----ELFLKIVEIVER 252 (264)
Q Consensus 241 ----~~F~~Ii~~~~~ 252 (264)
..|.++++.+++
T Consensus 210 ~~~~~~~~~~i~~~~~ 225 (227)
T 2tps_A 210 ESAARKFREEIQTYKT 225 (227)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHC
T ss_conf 9999999999999863
No 59
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=74.57 E-value=1.6 Score=22.73 Aligned_cols=72 Identities=13% Similarity=0.125 Sum_probs=44.0
Q ss_pred HHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCH-HHHHHHHCC-CCCCEEEECHHHCCH----HHHHH
Q ss_conf 304557643112455446799999963322416430886277898-789999668-989688974343588----99999
Q gi|254780197|r 172 AIGTGRVPAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVDV-ANAEDFSLI-ENIDGLLVGGASLQH----ELFLK 245 (264)
Q Consensus 172 AIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~-~N~~~l~~~-~~iDG~LVG~ASl~~----~~F~~ 245 (264)
--||.+=++.+.++++.+.++. ..++||++.|.|+. +..+.+.+. ..++|+.||.|=.-. =++.+
T Consensus 181 rDGt~~G~dl~l~~~i~~~~~~---------~~~ipvIasGGv~s~~Dl~~l~~l~~g~~gviiG~AL~iy~g~~i~l~~ 251 (260)
T 2agk_A 181 VEGLCGGIDELLVSKLFEWTKD---------YDDLKIVYAGGAKSVDDLKLVDELSHGKVDLTFGSSLDIFGGNLVKFED 251 (260)
T ss_dssp -----CCCCHHHHHHHHHHHTT---------CSSCEEEEESCCCCTHHHHHHHHHHTTCEEEECCTTBGGGTCSSBCHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHCC---------CCCCEEEEEECCCCHHHHHHHHHCCCCCCEEEEEHHHHHCCCCCCCHHH
T ss_conf 3012678679999999998555---------7994199994889999999998526998329977216764888386999
Q ss_pred HHHHHHH
Q ss_conf 9999999
Q gi|254780197|r 246 IVEIVER 252 (264)
Q Consensus 246 Ii~~~~~ 252 (264)
+++.-++
T Consensus 252 ~~~~~~~ 258 (260)
T 2agk_A 252 CCRWNEK 258 (260)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
T ss_conf 9999985
No 60
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus HB8} PDB: 2yw4_A
Probab=74.13 E-value=3.5 Score=20.51 Aligned_cols=159 Identities=18% Similarity=0.233 Sum_probs=87.8
Q ss_pred CCCCEEEEECCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHH
Q ss_conf 57711999689655999999732576310222012223334332120677754073100104200022135799999999
Q gi|254780197|r 36 SCCIDVAICPPATLIYESSRLCKTSSVIIGAQDCHIAEYGPYTGDISANMLADCGANFVILGHSERRIGHREDSYVVQSK 115 (264)
Q Consensus 36 ~~~veivi~Pp~~~L~~~~~~~~~s~I~igAQnv~~~~~GA~TGeiSa~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K 115 (264)
.+.+||-+--|. .+..+..+ +..++.+|+=.+-..+ .++...+.|++|.+-=| =+.+++
T Consensus 39 i~~iEitl~tp~-a~~~i~~l-~~~~~~iGaGTV~~~~--------~~~~a~~aGa~FivSP~--------~~~~v~--- 97 (207)
T 2yw3_A 39 VGALEITLRTEK-GLEALKAL-RKSGLLLGAGTVRSPK--------EAEAALEAGAAFLVSPG--------LLEEVA--- 97 (207)
T ss_dssp CCEEEEECSSTH-HHHHHHHH-TTSSCEEEEESCCSHH--------HHHHHHHHTCSEEEESS--------CCHHHH---
T ss_pred CCEEEEECCCCH-HHHHHHHH-CCCCCEEEEHHCCCHH--------HHHHHHHCCCCEEECCC--------CCHHHH---
T ss_conf 988999689922-99999985-4578589311205778--------99999980999898588--------869999---
Q ss_pred HHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCCCCCCCEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 99998334747998165520333498000111002221000000134113205135304557643112455446799999
Q gi|254780197|r 116 VKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEFKSSVPVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRIL 195 (264)
Q Consensus 116 ~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~~~~~~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l 195 (264)
+.|.++++-.|-=+--.-|-.. =++... + ++=.=|.-+.|. ..++|..
T Consensus 98 -~~a~~~~i~~iPGv~TpsEi~~----------A~~~G~------~--~vK~FPA~~~Gg------------~~~lk~l- 145 (207)
T 2yw3_A 98 -ALAQARGVPYLPGVLTPTEVER----------ALALGL------S--ALKFFPAEPFQG------------VRVLRAY- 145 (207)
T ss_dssp -HHHHHHTCCEEEEECSHHHHHH----------HHHTTC------C--EEEETTTTTTTH------------HHHHHHH-
T ss_pred -HHHHHCCCCEECCCCCHHHHHH----------HHHCCC------C--EEEECHHHHCCC------------HHHHHHH-
T ss_conf -9999629975178799999999----------997699------9--798660331378------------9999765-
Q ss_pred HHHCCHHHCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCHHHHHHHHHHHHHH
Q ss_conf 9633224164308862778987899996689896889743435889999999999999
Q gi|254780197|r 196 LDRFPEEGQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQHELFLKIVEIVERV 253 (264)
Q Consensus 196 ~~~~~~~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~~~F~~Ii~~~~~~ 253 (264)
+.-| .+++++==|.|+++|+.++++.+++ +-|||..+.+.+|..|-+.+++.
T Consensus 146 ~~p~----p~i~f~ptGGV~~~n~~~~la~~~v--~avGgs~l~~~d~~~i~~~~r~~ 197 (207)
T 2yw3_A 146 AEVF----PEVRFLPTGGIKEEHLPHYAALPNL--LAVGGSWLLQGNLEAVRAKVRAA 197 (207)
T ss_dssp HHHC----TTCEEEEBSSCCGGGHHHHHTCSSB--SCEEESGGGSSCHHHHHHHHHHH
T ss_pred HCCC----CCCCEEEECCCCHHHHHHHHCCCCE--EEEECHHHCCCCHHHHHHHHHHH
T ss_conf 3489----9880897379899999999805986--99980771388999999999999
No 61
>1izc_A Macrophomate synthase intermolecular diels- alderase; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5
Probab=70.02 E-value=1.8 Score=22.38 Aligned_cols=67 Identities=19% Similarity=0.244 Sum_probs=35.8
Q ss_pred CCCCCHHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHH---CCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHH
Q ss_conf 32120677754073100104200022135799999999999983---347479981655203334980001110022210
Q gi|254780197|r 78 TGDISANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACN---AGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSL 154 (264)
Q Consensus 78 TGeiSa~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~---~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l 154 (264)
..-..++++...|.+|++|-. |.- .=+.+.+..-+..+.. .+..|++.|.++.. ..+++-|+.+.
T Consensus 51 ps~~~ae~~a~~G~D~v~iD~-EHg---~~~~~~l~~~i~a~~~~~~~~~~~iVRvp~~~~--------~~i~~~LD~Ga 118 (339)
T 1izc_A 51 PSTFVTKVLAATKPDFVWIDV-EHG---MFNRLELHDAIHAAQHHSEGRSLVIVRVPKHDE--------VSLSTALDAGA 118 (339)
T ss_dssp CCHHHHHHHHHTCCSEEEEET-TTS---CCCHHHHHHHHHHHHHHTTTCSEEEEECCTTCH--------HHHHHHHHHTC
T ss_pred CCHHHHHHHHCCCCCEEEECC-CCC---CCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCH--------HHHHHHHHCCC
T ss_conf 996999999769989999857-889---999999999999999847899861884898887--------99999971799
Q ss_pred HC
Q ss_conf 00
Q gi|254780197|r 155 PS 156 (264)
Q Consensus 155 ~~ 156 (264)
.+
T Consensus 119 ~G 120 (339)
T 1izc_A 119 AG 120 (339)
T ss_dssp SE
T ss_pred CE
T ss_conf 98
No 62
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei}
Probab=70.01 E-value=4.5 Score=19.82 Aligned_cols=37 Identities=8% Similarity=0.036 Sum_probs=34.0
Q ss_pred CCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHC-CHH
Q ss_conf 4308862778987899996689896889743435-889
Q gi|254780197|r 205 KMRILYGGSVDVANAEDFSLIENIDGLLVGGASL-QHE 241 (264)
Q Consensus 205 ~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl-~~~ 241 (264)
++||+.||..+++.++++++....|-+.+||+.+ ||+
T Consensus 287 ~~pvi~~g~~t~e~ae~~l~~G~aDlV~~gR~~iaDPd 324 (361)
T 3gka_A 287 GGPFIVNENFTLDSAQAALDAGQADAVAWGKLFIANPD 324 (361)
T ss_dssp CSCEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHCTT
T ss_pred CCCEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHCCH
T ss_conf 87789979999999999998799756276499997923
No 63
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=69.01 E-value=2.9 Score=21.02 Aligned_cols=122 Identities=11% Similarity=0.192 Sum_probs=58.9
Q ss_pred CHHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCCCCC
Q ss_conf 06777540731001042000221357999999999999833474799816552033349800011100222100000013
Q gi|254780197|r 82 SANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEFKSS 161 (264)
Q Consensus 82 Sa~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~~~~ 161 (264)
+..+++++|++.+.+|---.- ++=|....+++..+.. ++...+ -+..+.+.++.+. ++.
T Consensus 116 dI~~~k~~Ga~GvVfG~L~~d---g~ID~~~~~~Lv~~a~-~l~vTF-----------HRAfD~~~d~~~a-le~----- 174 (287)
T 3iwp_A 116 DIRLAKLYGADGLVFGALTED---GHIDKELCMSLMAICR-PLPVTF-----------HRAFDMVHDPMAA-LET----- 174 (287)
T ss_dssp HHHHHHHTTCSEEEECCBCTT---SCBCHHHHHHHHHHHT-TSCEEE-----------CGGGGGCSCHHHH-HHH-----
T ss_pred HHHHHHHCCCCEEEEEEECCC---CCCCHHHHHHHHHHHC-CCCEEE-----------EEHHHHCCCHHHH-HHH-----
T ss_conf 999999869997899556899---9849999999999828-985697-----------4005640899999-999-----
Q ss_pred CCEEEECHHHHHC-CCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHHHCCCCCCEEEEC
Q ss_conf 4113205135304-557643112455446799999963322416430886277898789999668989688974
Q gi|254780197|r 162 VPVIAYEPIWAIG-TGRVPAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVDVANAEDFSLIENIDGLLVG 234 (264)
Q Consensus 162 ~~iIAYEPvWAIG-tG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG 234 (264)
++.+ .+=.|= +|..++..+ -...|++.+.. ....+.|+=||.|+++|+.+|.....++-+=.+
T Consensus 175 --Li~l-G~~rILTSGg~~~A~~---G~~~L~~Lv~~----a~~~I~Im~GGGV~~~Ni~~l~~~~G~~eiH~S 238 (287)
T 3iwp_A 175 --LLTL-GFERVLTSGCDSSALE---GLPLIKRLIEQ----AKGRIVVMPGGGITDRNLQRILEGSGATEFHCS 238 (287)
T ss_dssp --HHHH-TCSEEEECTTSSSTTT---THHHHHHHHHH----HTTSSEEEECTTCCTTTHHHHHHHHCCSEEEEC
T ss_pred --HHHC-CCCEEECCCCCCCHHH---HHHHHHHHHHH----CCCCCEEEECCCCCHHHHHHHHHHCCCCEEEEC
T ss_conf --9973-9885676888566888---68999999997----389946985698898999999997199189768
No 64
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicusatcc 33223} PDB: 3krz_A*
Probab=66.06 E-value=7 Score=18.63 Aligned_cols=48 Identities=17% Similarity=0.115 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHCCHHHCCCEEEECCCC-CHHHHHHHHCCCCCCEEEECHHHC-CHH
Q ss_conf 554467999999633224164308862778-987899996689896889743435-889
Q gi|254780197|r 185 EKIHSFVRRILLDRFPEEGQKMRILYGGSV-DVANAEDFSLIENIDGLLVGGASL-QHE 241 (264)
Q Consensus 185 ~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV-~~~N~~~l~~~~~iDG~LVG~ASl-~~~ 241 (264)
......||+.+ ++|++.-|.+ +++.+++++.....|.+.+||+.+ ||+
T Consensus 266 ~~~~~~ik~~~---------~~pvi~~G~i~~~e~ae~~l~~g~~DlV~~gR~~iadPd 315 (343)
T 3kru_A 266 VKYAETIKKRC---------NIKTSAVGLITTQELAEEILSNERADLVALGRELLRNPY 315 (343)
T ss_dssp HHHHHHHHHHH---------TCEEEEESSCCCHHHHHHHHHTTSCSEEEESHHHHHCTT
T ss_pred HHHHHHHHHHC---------CCCEEEECCCCCHHHHHHHHHCCCCEEHHHHHHHHHCCH
T ss_conf 67999999974---------988899899499999999998799212686399987934
No 65
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic degradation; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=64.63 E-value=2.5 Score=21.48 Aligned_cols=143 Identities=17% Similarity=0.269 Sum_probs=74.1
Q ss_pred CCCCHHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCC
Q ss_conf 21206777540731001042000221357999999999999833474799816552033349800011100222100000
Q gi|254780197|r 79 GDISANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEF 158 (264)
Q Consensus 79 GeiSa~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~ 158 (264)
....++++...|.+|++|- .|.-. =+-+.+..-+.++...++.|++-|.+... ..+++=|+.+..++.
T Consensus 49 sp~~~Ei~~~~GfDfv~ID-~EHg~---~~~~~~~~~i~aa~~~~~~~iVRvp~~~~--------~~i~r~LD~Ga~GIi 116 (287)
T 2v5j_A 49 SSYSAELLAGAGFDWLLID-GEHAP---NNVQTVLTQLQAIAPYPSQPVVRPSWNDP--------VQIKQLLDVGTQTLL 116 (287)
T ss_dssp CHHHHHHHHTSCCSEEEEE-SSSSS---CCHHHHHHHHHHHTTSSSEEEEECSSSCH--------HHHHHHHHTTCCEEE
T ss_pred CHHHHHHHHCCCCCEEEEE-CCCCC---CCHHHHHHHHHHHHCCCCCCEEECCCCCH--------HHHHHHHHCCCCEEE
T ss_conf 9699999973898999980-67898---99999999999875359973554678999--------999999837998679
Q ss_pred C--------CCCC--EEEECHHHHHCCCC-CCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHHHCCCC
Q ss_conf 0--------1341--13205135304557-64311245544679999996332241643088627789878999966898
Q gi|254780197|r 159 K--------SSVP--VIAYEPIWAIGTGR-VPAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVDVANAEDFSLIEN 227 (264)
Q Consensus 159 ~--------~~~~--iIAYEPvWAIGtG~-~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~~N~~~l~~~~~ 227 (264)
- .+.+ ..=|.|.=--|-|- .+....-.....+.+..-.+.. +-+.==.----+|+++|++.|+
T Consensus 117 vP~V~s~eea~~~v~~~kypP~G~RG~g~~~~~~~~~~~~~~~~~~~n~~~l------vi~qIEt~eavenldeI~av~G 190 (287)
T 2v5j_A 117 VPMVQNADEAREAVRATRYPPAGIRGVGSALARASRWNRIPDYLQKANDQMC------VLVQIETREAMKNLPQILDVEG 190 (287)
T ss_dssp ESCCCSHHHHHHHHHHTSCTTTSCCCGGGTTTGGGTTTTSTTHHHHHHHHCE------EEEEECSHHHHHTHHHHHTSTT
T ss_pred ECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEE------EEEECCCHHHHHHHHHHHCCCC
T ss_conf 4675999999999983717999989998642334556674067787330248------8641255999998999864478
Q ss_pred CCEEEECHHHCC
Q ss_conf 968897434358
Q gi|254780197|r 228 IDGLLVGGASLQ 239 (264)
Q Consensus 228 iDG~LVG~ASl~ 239 (264)
||++++|-+=|.
T Consensus 191 vD~i~iGP~DLS 202 (287)
T 2v5j_A 191 VDGVFIGPADLS 202 (287)
T ss_dssp EEEEEECHHHHH
T ss_pred CCEEEECHHHHH
T ss_conf 876998928887
No 66
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2- epimerase; mannac-6-P epimerase, NANE, structural genomics, protein structure initiative; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=63.98 E-value=7.7 Score=18.39 Aligned_cols=136 Identities=11% Similarity=0.094 Sum_probs=71.8
Q ss_pred CCCCCHHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCC
Q ss_conf 32120677754073100104200022135799999999999983347479981655203334980001110022210000
Q gi|254780197|r 78 TGDISANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSE 157 (264)
Q Consensus 78 TGeiSa~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~ 157 (264)
..........+.|++.+.+....+.+ ..+. +..-++.....+..++++.+-+-.+. .....+..
T Consensus 76 ~~~~~~~~~~~agad~i~i~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~t~~~--------a~~~~~~g---- 139 (223)
T 1y0e_A 76 ATSKEVDELIESQCEVIALDATLQQR-PKET---LDELVSYIRTHAPNVEIMADIATVEE--------AKNAARLG---- 139 (223)
T ss_dssp CSHHHHHHHHHHTCSEEEEECSCSCC-SSSC---HHHHHHHHHHHCTTSEEEEECSSHHH--------HHHHHHTT----
T ss_pred CHHHHHHHHHHCCCCEEEEECCCCCC-HHHH---HHHHHHHHHHHCCCCEEECCCCCHHH--------HHHHHHCC----
T ss_conf 02999999998799999975456788-1657---99999998873787157548799999--------99999759----
Q ss_pred CCCCCCEEEECHHHHHCCCCC-CCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCC-CHHHHHHHHCCCCCCEEEECH
Q ss_conf 001341132051353045576-431124554467999999633224164308862778-987899996689896889743
Q gi|254780197|r 158 FKSSVPVIAYEPIWAIGTGRV-PAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSV-DVANAEDFSLIENIDGLLVGG 235 (264)
Q Consensus 158 ~~~~~~iIAYEPvWAIGtG~~-a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV-~~~N~~~l~~~~~iDG~LVG~ 235 (264)
.+ .|... .+|.+.. ............++.... .-++||+-+|.+ +++.+...+.. ..||+.||+
T Consensus 140 --~d--~i~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~------~~~iPvia~GGI~t~ed~~~al~~-GAdgV~vGs 205 (223)
T 1y0e_A 140 --FD--YIGTT---LHGYTSYTQGQLLYQNDFQFLKDVLQ------SVDAKVIAEGNVITPDMYKRVMDL-GVHCSVVGG 205 (223)
T ss_dssp --CS--EEECT---TTTSSTTSTTCCTTHHHHHHHHHHHH------HCCSEEEEESSCCSHHHHHHHHHT-TCSEEEECH
T ss_pred --CC--EEEEC---CCCCCCCCCCCCCCHHHHHHHHHHHH------CCCCCEEEECCCCCHHHHHHHHHC-CCCEEEECH
T ss_conf --99--69976---77885335688765547999999984------289978986898999999999986-999999842
Q ss_pred HHCCHHHH
Q ss_conf 43588999
Q gi|254780197|r 236 ASLQHELF 243 (264)
Q Consensus 236 ASl~~~~F 243 (264)
|=.+|+..
T Consensus 206 Ai~~p~~~ 213 (223)
T 1y0e_A 206 AITRPKEI 213 (223)
T ss_dssp HHHCHHHH
T ss_pred HHCCHHHH
T ss_conf 11798999
No 67
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A substrate tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=63.18 E-value=7.9 Score=18.29 Aligned_cols=41 Identities=15% Similarity=0.231 Sum_probs=29.8
Q ss_pred CCCEEEECCCCCH------------HHHHHHHCCCCCCEEEECHHHC-CHHHHHH
Q ss_conf 6430886277898------------7899996689896889743435-8899999
Q gi|254780197|r 204 QKMRILYGGSVDV------------ANAEDFSLIENIDGLLVGGASL-QHELFLK 245 (264)
Q Consensus 204 ~~i~ilYGGSV~~------------~N~~~l~~~~~iDG~LVG~ASl-~~~~F~~ 245 (264)
-.+|+-|||.++. +-|+.+++ -..|=+.||.|++ +|+-|.+
T Consensus 326 ~~iPltvGGGIrsi~die~~~~~~~e~A~~ll~-~GadKV~inS~Av~~pe~~~e 379 (555)
T 1jvn_A 326 VFVPLTVGGGIKDIVDVDGTKIPALEVASLYFR-SGADKVSIGTDAVYAAEKYYE 379 (555)
T ss_dssp CCSCEEEESSCSCEECTTCCEECHHHHHHHHHH-HTCSEEEECHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCHHHHCCCCCCHHHHHHHHHH-CCCCEEEECHHHHHCCHHHHH
T ss_conf 688789847715646733101102799999997-799879988378609076688
No 68
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp}
Probab=62.55 E-value=8.2 Score=18.22 Aligned_cols=48 Identities=17% Similarity=0.116 Sum_probs=35.6
Q ss_pred CCCEEEECCCC-CHHHHHHHHCCCCCCEEEECHHHCCHHHHHH-HHHHHHH
Q ss_conf 64308862778-9878999966898968897434358899999-9999999
Q gi|254780197|r 204 QKMRILYGGSV-DVANAEDFSLIENIDGLLVGGASLQHELFLK-IVEIVER 252 (264)
Q Consensus 204 ~~i~ilYGGSV-~~~N~~~l~~~~~iDG~LVG~ASl~~~~F~~-Ii~~~~~ 252 (264)
.++||+=+|.+ +++++...+.. ..||++||+|=.+|++..+ .++..+|
T Consensus 180 ~~ipvia~GGI~t~~d~~~~~~~-GAd~V~vGsAi~~~~~i~~~~~~ai~~ 229 (232)
T 3igs_A 180 AGCRVIAEGRYNSPALAAEAIRY-GAWAVTVGSAITRLEHICGWYNDALKK 229 (232)
T ss_dssp TTCCEEEESCCCSHHHHHHHHHT-TCSEEEECHHHHCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHC-CCCEEEECHHHCCHHHHHHHHHHHHHH
T ss_conf 78239985898999999999986-999999894775909999999999997
No 69
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=61.37 E-value=8.6 Score=18.09 Aligned_cols=140 Identities=13% Similarity=0.041 Sum_probs=74.8
Q ss_pred CCCCCCHHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEE-CCCCCHHHHCCCCCCCCCCCHHHHHH
Q ss_conf 33212067775407310010420002213579999999999998334747998-16552033349800011100222100
Q gi|254780197|r 77 YTGDISANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVC-IGETDEEYRSGRTFEVLQKQLDCSLP 155 (264)
Q Consensus 77 ~TGeiSa~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlC-iGE~~~e~~~~~~~~~l~~Ql~~~l~ 155 (264)
-+|..-..++.+.|++++.+ |++- .++.+..=+..+.+.+...++- ...+..+. . ..+. ..
T Consensus 67 Di~~~~~~~~~~~gad~itv-h~~~------g~~~i~~~~~~~~~~~~~~~v~~~~~~~~~~--------~-~~~~--~~ 128 (216)
T 1q6o_A 67 DAGKILSRMCFEANADWVTV-ICCA------DINTAKGALDVAKEFNGDVQIELTGYWTWEQ--------A-QQWR--DA 128 (216)
T ss_dssp SCHHHHHHHHHHTTCSEEEE-ETTS------CHHHHHHHHHHHHHTTCEEEEEECSCCCHHH--------H-HHHH--HT
T ss_pred CHHHHHHHHHHHHCCCEEEE-CCCC------CHHHHHHHHHHHHHHCCCCEEEECCCCCHHH--------H-HHHH--HC
T ss_conf 73779999999849999998-1317------8799999999987522211231069998999--------9-9888--66
Q ss_pred CCCCCCCCEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHHHCCCCCCEEEECH
Q ss_conf 00001341132051353045576431124554467999999633224164308862778987899996689896889743
Q gi|254780197|r 156 SEFKSSVPVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVDVANAEDFSLIENIDGLLVGG 235 (264)
Q Consensus 156 ~~~~~~~~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ 235 (264)
++. .-.+-.+++|-. .|....+... ..+|.... ..+++.=+|.++++++.+... .+.|++.|||
T Consensus 129 ~~~-~~~~~~~~~~~~---~~~~~~~~~~----~~i~~~~~-------~~~~i~~~gGi~~~~~~~~~~-~Gad~iVVGr 192 (216)
T 1q6o_A 129 GIG-QVVYHRSRDAQA---AGVAWGEADI----TAIKRLSD-------MGFKVTVTGGLALEDLPLFKG-IPIHVFIAGR 192 (216)
T ss_dssp TCC-EEEEECCHHHHH---TTCCCCHHHH----HHHHHHHH-------TTCEEEEESSCCGGGGGGGTT-SCCSEEEESH
T ss_pred CCC-CEEEECCCCCCC---CCEECCHHHH----HHHHHHHC-------CCCEEEECCCCCCCCHHHHHH-CCCCEEEECH
T ss_conf 823-210210243587---8873788899----99999846-------897387689988036999998-5999999882
Q ss_pred HHCCHHHHHHHHHHH
Q ss_conf 435889999999999
Q gi|254780197|r 236 ASLQHELFLKIVEIV 250 (264)
Q Consensus 236 ASl~~~~F~~Ii~~~ 250 (264)
+=..+++-.+.++.+
T Consensus 193 ~I~~a~dp~~a~~~~ 207 (216)
T 1q6o_A 193 SIRDAASPVEAARQF 207 (216)
T ss_dssp HHHTSSCHHHHHHHH
T ss_pred HHCCCCCHHHHHHHH
T ss_conf 541799999999999
No 70
>3hh8_A Metal ABC transporter substrate-binding lipoprotein; metal binding, cell membrane, copper, copper transport, ION transport; 1.87A {Streptococcus pyogenes serotype M1} PDB: 1psz_A
Probab=59.73 E-value=9.1 Score=17.91 Aligned_cols=94 Identities=12% Similarity=0.089 Sum_probs=54.3
Q ss_pred HHHCCCCCCCCEEEECHHHH---------------HCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCE-EEECCCCCH
Q ss_conf 10000001341132051353---------------04557643112455446799999963322416430-886277898
Q gi|254780197|r 153 SLPSEFKSSVPVIAYEPIWA---------------IGTGRVPAVVDLEKIHSFVRRILLDRFPEEGQKMR-ILYGGSVDV 216 (264)
Q Consensus 153 ~l~~~~~~~~~iIAYEPvWA---------------IGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~-ilYGGSV~~ 216 (264)
.+.......+.+++|+|.|. +++|..+++.++.++...||+. +++ |++-=.+++
T Consensus 175 ~l~~~~~~~~~~v~~h~a~~Yf~~~ygl~~~~~~~~~~~~e~s~~~l~~l~~~ik~~----------~v~~if~e~~~~~ 244 (294)
T 3hh8_A 175 KFDAIAENKKLIVTSEGCFKYFSKAYGVPSAYIWEINTEEEGTPDQISSLIEKLKVI----------KPSALFVESSVDR 244 (294)
T ss_dssp TTTTSCGGGCCEEEEESCCHHHHHHHTCCEEEEESSCCSCCCCHHHHHHHHHHHHHS----------CCSCEEEETTSCS
T ss_pred HHHHCCCCCEEEEEECHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHC----------CCCEEEECCCCCH
T ss_conf 875244555033210607799999869814034466775546889999999999873----------9978997698991
Q ss_pred HHHHHHHCCCCCCEE---E---ECHHHCCHHHHHHHHHHHHHHHHH
Q ss_conf 789999668989688---9---743435889999999999999998
Q gi|254780197|r 217 ANAEDFSLIENIDGL---L---VGGASLQHELFLKIVEIVERVYVD 256 (264)
Q Consensus 217 ~N~~~l~~~~~iDG~---L---VG~ASl~~~~F~~Ii~~~~~~~~~ 256 (264)
..++.|...-++.=+ . +|.-.-..++|.++++.--+...+
T Consensus 245 ~~~~~la~e~gv~i~~~l~~d~l~~~~~~~~~Y~~~m~~N~~~l~~ 290 (294)
T 3hh8_A 245 RPMETVSKDSGIPIYSEIFTDSIAKKGKPGDSYYAMMKWNLDKISE 290 (294)
T ss_dssp HHHHHHHHHHCCCEEEEECSSSCCCTTSTTCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 9999999981997641136556778898746799999999999999
No 71
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 2abb_A* 1vys_X* 1vyp_X*
Probab=58.97 E-value=9.4 Score=17.83 Aligned_cols=40 Identities=20% Similarity=0.238 Sum_probs=34.1
Q ss_pred CCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHC-CHHHHHH
Q ss_conf 4308862778987899996689896889743435-8899999
Q gi|254780197|r 205 KMRILYGGSVDVANAEDFSLIENIDGLLVGGASL-QHELFLK 245 (264)
Q Consensus 205 ~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl-~~~~F~~ 245 (264)
+++++-||..+++.+++++.....|-+-+||+.+ ||+ |..
T Consensus 294 ~~~vi~~g~~t~~~ae~~l~~G~aDlV~~gR~liadPd-~~~ 334 (364)
T 1vyr_A 294 HGVIIGAGAYTAEKAEDLIGKGLIDAVAFGRDYIANPD-LVA 334 (364)
T ss_dssp CSEEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHCTT-HHH
T ss_pred CCEEEECCCCCHHHHHHHHHCCCCCEEHHHHHHHHCCH-HHH
T ss_conf 86199668999999999998799745655389886949-999
No 72
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens}
Probab=58.93 E-value=9.4 Score=17.83 Aligned_cols=51 Identities=14% Similarity=0.148 Sum_probs=38.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHC
Q ss_conf 431124554467999999633224164308862778987899996689896889743435
Q gi|254780197|r 179 PAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASL 238 (264)
Q Consensus 179 a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl 238 (264)
-+|+++.++.+.+|+. .+++.|.=-|.+|++|+.++. ..+||.+=+|..-.
T Consensus 226 ~s~e~l~~~v~~l~~~--------~~~v~ieaSGGI~~~ni~~ya-~~GVD~is~G~lt~ 276 (299)
T 2jbm_A 226 FKPEELHPTATVLKAQ--------FPSVAVEASGGITLDNLPQFC-GPHIDVISMGMLTQ 276 (299)
T ss_dssp CCHHHHHHHHHHHHHH--------CTTSEEEEESSCCTTTHHHHC-CTTCCEEECTHHHH
T ss_pred CCHHHHHHHHHHHHCC--------CCCEEEEEECCCCHHHHHHHH-HCCCCEEECCHHHC
T ss_conf 8999999999998464--------897699998999999999999-72989998296545
No 73
>2f7f_A Nicotinate phosphoribosyltransferase, putative; structural genomics, PSI, protein structure initiative; 2.00A {Enterococcus faecalis V583} SCOP: c.1.17.1 d.41.2.1
Probab=57.13 E-value=10 Score=17.64 Aligned_cols=58 Identities=19% Similarity=0.145 Sum_probs=40.8
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHHHCC-CCCCEEEECHHHCC
Q ss_conf 43112455446799999963322416430886277898789999668-98968897434358
Q gi|254780197|r 179 PAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVDVANAEDFSLI-ENIDGLLVGGASLQ 239 (264)
Q Consensus 179 a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~~N~~~l~~~-~~iDG~LVG~ASl~ 239 (264)
++.-+..+....+|+.+.+. ..+.++|+++|+++++++.++... ..+|.|=||+..+.
T Consensus 263 ~DSGDp~~~~~~vr~~ld~~---G~~~v~Ii~Sdglde~~i~~l~~~ga~i~~FGiGT~l~~ 321 (494)
T 2f7f_A 263 IDSGDMAYISKRVREQLDEA---GFTEAKIYASNDLDENTILNLKMQKSKIDVWGVGTKLIT 321 (494)
T ss_dssp ECSSCHHHHHHHHHHHHHHT---TCTTCEEEECSSCCHHHHHHHHHTTCCCCEEEECHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHHC---CCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCEEE
T ss_conf 66798599999999999867---998608999099899999999975997069840551343
No 74
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=55.03 E-value=11 Score=17.42 Aligned_cols=49 Identities=12% Similarity=0.252 Sum_probs=37.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHH
Q ss_conf 4311245544679999996332241643088627789878999966898968897434
Q gi|254780197|r 179 PAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVDVANAEDFSLIENIDGLLVGGA 236 (264)
Q Consensus 179 a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~A 236 (264)
-+|+++.++...+|.. .+++.|.=-|.+|++|+.++... +||++=||..
T Consensus 211 ~~~~~~~~~v~~~~~~--------~~~v~ieaSGGI~~~~i~~ya~~-GVD~isvg~l 259 (273)
T 2b7n_A 211 LSVLETKEIAAYRDAH--------YPFVLLEASGNISLESINAYAKS-GVDAISVGAL 259 (273)
T ss_dssp CCHHHHHHHHHHHHHH--------CTTCEEEEESSCCTTTHHHHHTT-TCSEEECTHH
T ss_pred CCHHHHHHHHHHHHCC--------CCCEEEEEECCCCHHHHHHHHHC-CCCEEECCHH
T ss_conf 8999999999997376--------99669999799999999999976-9999985865
No 75
>1o4u_A Type II quinolic acid phosphoribosyltransferase; TM1645, structural genomics, JCSG, PSI, protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=54.43 E-value=7.6 Score=18.40 Aligned_cols=52 Identities=15% Similarity=0.268 Sum_probs=38.1
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCC
Q ss_conf 4311245544679999996332241643088627789878999966898968897434358
Q gi|254780197|r 179 PAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQ 239 (264)
Q Consensus 179 a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~ 239 (264)
-+|+++.++...+|.. ..++.+.--|.+|++|+.++.. .+||.+=+|..-.+
T Consensus 222 ~~~~~i~~~v~~l~~~--------~~~v~ieaSGGI~~~ni~~ya~-~GVD~Is~g~lt~~ 273 (285)
T 1o4u_A 222 LSPEEVKDISRRIKDI--------NPNVIVEVSGGITEENVSLYDF-ETVDVISSSRLTLQ 273 (285)
T ss_dssp CCHHHHHHHHHHHHHH--------CTTSEEEEEECCCTTTGGGGCC-TTCCEEEEGGGTSS
T ss_pred CCHHHHHHHHHHHHHH--------CCCEEEEEECCCCHHHHHHHHH-CCCCEEECCHHHCC
T ss_conf 9878899999999975--------8977999989997999999986-59899986977659
No 76
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=53.99 E-value=11 Score=17.32 Aligned_cols=66 Identities=21% Similarity=0.406 Sum_probs=40.4
Q ss_pred HHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCHH------HHHHHHHHHHHHHHHHHHHCC
Q ss_conf 67999999633224164308862778987899996689896889743435889------999999999999998430002
Q gi|254780197|r 189 SFVRRILLDRFPEEGQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQHE------LFLKIVEIVERVYVDSCLEDT 262 (264)
Q Consensus 189 ~~Ir~~l~~~~~~~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~~------~F~~Ii~~~~~~~~~~~~~~~ 262 (264)
.+||... .-| .+++++==|.|+.+|+.++++.+.+ +.+||.+|-+. +|..|-+.++ -+.++..|..
T Consensus 146 ~~lkal~-~p~----p~~~f~ptGGV~~~N~~~yl~ag~v--~~~~Gs~l~~~~~i~~~d~~~i~~~a~-~~~~~ike~~ 217 (224)
T 1vhc_A 146 KMIKALL-GPY----AQLQIMPTGGIGLHNIRDYLAIPNI--VACGGSWFVEKKLIQSNNWDEIGRLVR-EVIDIIKEGG 217 (224)
T ss_dssp HHHHHHH-TTT----TTCEEEEBSSCCTTTHHHHHTSTTB--CCEEECGGGCHHHHHTTCHHHHHHHHH-HHHHHHTC--
T ss_pred HHHHHHH-CCC----CCCEEEEECCCCHHHHHHHHHCCCE--EEEECHHHCCHHHHHCCCHHHHHHHHH-HHHHHHHHHC
T ss_conf 9998565-345----6871885179898899999938998--999882536977774389999999999-9999999756
No 77
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3
Probab=53.90 E-value=11 Score=17.31 Aligned_cols=56 Identities=14% Similarity=0.068 Sum_probs=36.4
Q ss_pred CCCCCCCCCHHHHHHHCCCCEEECCHHCCCC-------CCC-CHHHHHHHHHHHHHCCCCEEEEC
Q ss_conf 3343321206777540731001042000221-------357-99999999999983347479981
Q gi|254780197|r 74 YGPYTGDISANMLADCGANFVILGHSERRIG-------HRE-DSYVVQSKVKSACNAGLYPIVCI 130 (264)
Q Consensus 74 ~GA~TGeiSa~mL~d~g~~~viiGHSERR~~-------~~E-~d~~I~~K~~~al~~~l~pIlCi 130 (264)
.+.|| |--...|++.|.+.|=|.=+..+-. .++ .-+.+.+-+..|.+.||.||+..
T Consensus 34 ~~~~t-e~D~~~ia~~GfN~VRlpv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~vildl 97 (341)
T 1vjz_A 34 TGNFK-EEDFLWMAQWDFNFVRIPMCHLLWSDRGNPFIIREDFFEKIDRVIFWGEKYGIHICISL 97 (341)
T ss_dssp CCCCC-HHHHHHHHHTTCCEEEEEEEGGGTSCSSCTTCCCGGGHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCCC-HHHHHHHHHCCCCEEEEECCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEE
T ss_conf 67887-99999999869988993066999158888776598999999999999998799899972
No 78
>2ze6_A Isopentenyl transferase; crown GALL tumor, cytokinin biosynthesis, plasmid; HET: DST AMP; 2.10A {Agrobacterium tumefaciens} PDB: 2ze5_A* 2ze7_A* 2ze8_A
Probab=52.77 E-value=9.9 Score=17.69 Aligned_cols=55 Identities=11% Similarity=-0.132 Sum_probs=30.0
Q ss_pred CCCCCCHHHHHHHCCCCEEECCHHCCCCCCCCH--HHHHHHHHHHHHCCCCEEEECCCC
Q ss_conf 332120677754073100104200022135799--999999999983347479981655
Q gi|254780197|r 77 YTGDISANMLADCGANFVILGHSERRIGHREDS--YVVQSKVKSACNAGLYPIVCIGET 133 (264)
Q Consensus 77 ~TGeiSa~mL~d~g~~~viiGHSERR~~~~E~d--~~I~~K~~~al~~~l~pIlCiGE~ 133 (264)
-|+-.|.+.+ .++.+-++||-+-...|.-.+ ......+..+.+.|-.||+|=|-.
T Consensus 44 gTakp~~~e~--~~v~H~li~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~pIlvGGTg 100 (253)
T 2ze6_A 44 GSGRPLESEL--QSTRRIYLDSRPLTEGILDAESAHRRLIFEVDWRKSEEGLILEGGSI 100 (253)
T ss_dssp TTTCCCGGGG--TTCCEECSCCCCGGGCSCCHHHHHHHHHHHHHTTTTSSEEEEEECCH
T ss_pred EECCCCHHHH--CHHCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCHH
T ss_conf 7789997896--30020101355866356699999999999999996699889988859
No 79
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, quinolinic acid; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=52.57 E-value=12 Score=17.18 Aligned_cols=52 Identities=15% Similarity=0.144 Sum_probs=40.1
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCC
Q ss_conf 4311245544679999996332241643088627789878999966898968897434358
Q gi|254780197|r 179 PAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQ 239 (264)
Q Consensus 179 a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~ 239 (264)
-+|+++.++.+.+|.. .+++.|.=-|.+|++|+.++.. .+||++=+|..-.+
T Consensus 223 ~~pe~~~~~v~~~~~~--------~~~v~ieaSGGI~~~ni~~ya~-~GVD~Is~g~lt~~ 274 (284)
T 1qpo_A 223 FAVWQTQTAVQRRDSR--------APTVMLESSGGLSLQTAATYAE-TGVDYLAVGALTHS 274 (284)
T ss_dssp CCHHHHHHHHHHHHHH--------CTTCEEEEESSCCTTTHHHHHH-TTCSEEECGGGTSS
T ss_pred CCHHHHHHHHHHHHCC--------CCCEEEEEECCCCHHHHHHHHH-CCCCEEECCHHHCC
T ss_conf 8979999999997376--------9947999989998999999986-69899983967559
No 80
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=52.13 E-value=12 Score=17.13 Aligned_cols=42 Identities=17% Similarity=0.209 Sum_probs=35.2
Q ss_pred CCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHC-CHHHHHHHH
Q ss_conf 4308862778987899996689896889743435-889999999
Q gi|254780197|r 205 KMRILYGGSVDVANAEDFSLIENIDGLLVGGASL-QHELFLKIV 247 (264)
Q Consensus 205 ~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl-~~~~F~~Ii 247 (264)
++||+..|.++++.+++++....+|-+-+||+.+ ||+ |..-+
T Consensus 299 ~~pvi~~G~~~~~~ae~~l~~g~aDlV~~gR~liadPd-~~~K~ 341 (377)
T 2r14_A 299 KGGLIYCGNYDAGRAQARLDDNTADAVAFGRPFIANPD-LPERF 341 (377)
T ss_dssp CSEEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHCTT-HHHHH
T ss_pred CCCEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHCCC-HHHHH
T ss_conf 88789968849999999998699747186499997910-99999
No 81
>1toa_A Tromp-1, protein (periplasmic binding protein TROA); zinc binding protein, ABC transporter; 1.80A {Treponema pallidum} SCOP: c.92.2.2 PDB: 1k0f_A
Probab=51.58 E-value=12 Score=17.08 Aligned_cols=80 Identities=16% Similarity=0.270 Sum_probs=49.2
Q ss_pred CCCEEEECHHHH---------------HCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCC-EEEECCCCCHHHHHHHHC
Q ss_conf 341132051353---------------0455764311245544679999996332241643-088627789878999966
Q gi|254780197|r 161 SVPVIAYEPIWA---------------IGTGRVPAVVDLEKIHSFVRRILLDRFPEEGQKM-RILYGGSVDVANAEDFSL 224 (264)
Q Consensus 161 ~~~iIAYEPvWA---------------IGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i-~ilYGGSV~~~N~~~l~~ 224 (264)
.+.++.|.|.|. ...|..|++.++.++...||+. ++ -|+|--..++..++.+.+
T Consensus 197 ~~~~v~~H~a~~Yf~~~ygl~~~~~~~~~~~~eps~~~l~~l~~~ik~~----------~v~~if~e~~~~~~~~~~ia~ 266 (313)
T 1toa_A 197 RRVLVTAHDAFGYFSRAYGFEVKGLQGVSTASEASAHDMQELAAFIAQR----------KLPAIFIESSIPHKNVEALRD 266 (313)
T ss_dssp GCEEEEEESCCHHHHHHHTCEEEEEECSSCSSCCCHHHHHHHHHHHHHT----------TCSEEEEETTSCTHHHHHHHH
T ss_pred CCCEEECCHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHC----------CCCEEEEECCCCHHHHHHHHH
T ss_conf 5510102667999999769972422356887431468999999999984----------998899848989099999999
Q ss_pred CCCCCE-------EEE----CHHHCCHHHHHHHHHHH
Q ss_conf 898968-------897----43435889999999999
Q gi|254780197|r 225 IENIDG-------LLV----GGASLQHELFLKIVEIV 250 (264)
Q Consensus 225 ~~~iDG-------~LV----G~ASl~~~~F~~Ii~~~ 250 (264)
.-++.+ -|. |......+.|.++++.-
T Consensus 267 ~~~~k~~~v~~~~~l~~d~l~~~~~~~~~Y~~~m~~N 303 (313)
T 1toa_A 267 AVQARGHVVQIGGELFSDAMGDAGTSEGTYVGMVTHN 303 (313)
T ss_dssp HHHTTTCCCEEEEEECSSSCCCTTSGGGSHHHHHHHH
T ss_pred HHCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 8678841324577235444567888867799999999
No 82
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=51.00 E-value=13 Score=17.02 Aligned_cols=45 Identities=16% Similarity=0.061 Sum_probs=18.6
Q ss_pred HHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 775407310010420002213579999999999998334747998
Q gi|254780197|r 85 MLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVC 129 (264)
Q Consensus 85 mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlC 129 (264)
..+++|++++++-..=-=..+.-+++.+-.-+....++-=.||+.
T Consensus 98 ~a~~~G~d~~lv~pP~y~~~~~~~~~~i~~~~~~ia~~~~lpiii 142 (309)
T 3fkr_A 98 RAQQLGAAMVMAMPPYHGATFRVPEAQIFEFYARVSDAIAIPIMV 142 (309)
T ss_dssp HHHHTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHHHHCSSCEEE
T ss_pred HHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEE
T ss_conf 974349987885487445677889999999999997224887698
No 83
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=50.74 E-value=13 Score=17.00 Aligned_cols=134 Identities=7% Similarity=0.092 Sum_probs=64.4
Q ss_pred HHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHH-CCCCCCCCCCCHHHHHHCCCCCCC
Q ss_conf 7775407310010420002213579999999999998334747998165520333-498000111002221000000134
Q gi|254780197|r 84 NMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYR-SGRTFEVLQKQLDCSLPSEFKSSV 162 (264)
Q Consensus 84 ~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~-~~~~~~~l~~Ql~~~l~~~~~~~~ 162 (264)
...+++|++.+++-.. -++.-+++.+-.-++...+.-=.||+-- . ...+- ...+.++ +.. +. ...+
T Consensus 101 ~~a~~~Gad~i~v~pP---~~~~~~~~~i~~~~~~i~~~~~~pi~lY-n-~P~~~g~~~~~~~----~~~-l~---~~pn 167 (301)
T 1xky_A 101 KKATEVGVDAVMLVAP---YYNKPSQEGMYQHFKAIAESTPLPVMLY-N-VPGRSIVQISVDT----VVR-LS---EIEN 167 (301)
T ss_dssp HHHHHTTCSEEEEECC---CSSCCCHHHHHHHHHHHHHTCSSCEEEE-E-CHHHHSSCCCHHH----HHH-HH---TSTT
T ss_pred HHHHHCCCCEEEECCC---CCCCCCHHHHHHHHHHHHHCCCCCEEEE-E-CCCCCCCCCCHHH----HHH-HC---CCCC
T ss_conf 9999759999997899---7899899999999999985189978999-6-8763355879999----998-53---3899
Q ss_pred CEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCHHH
Q ss_conf 11320513530455764311245544679999996332241643088627789878999966898968897434358899
Q gi|254780197|r 163 PVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQHEL 242 (264)
Q Consensus 163 ~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~~~ 242 (264)
|++.. ..+ .+.......++. ..+++.++.|. ....-..+. -+.+|+..|.+..-|+.
T Consensus 168 -vvgiK---------~~~-~~~~~~~~~~~~--------~~~~~~v~~G~---~~~~~~~~~-~G~~G~i~~~~n~~p~~ 224 (301)
T 1xky_A 168 -IVAIK---------DAG-GDVLTMTEIIEK--------TADDFAVYSGD---DGLTLPAMA-VGAKGIVSVASHVIGNE 224 (301)
T ss_dssp -EEEEE---------ECS-SCHHHHHHHHHH--------SCTTCEEEESS---GGGHHHHHH-TTCCEEEESTHHHHHHH
T ss_pred -EEEEE---------CCC-CCHHHHHHHHHH--------CCCCEEEEECC---CCCCCHHHH-CCCCCEEEHHHHHHHHH
T ss_conf -89986---------588-977899999863--------48986999687---201441987-59960111776652389
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999999
Q gi|254780197|r 243 FLKIVEIVERV 253 (264)
Q Consensus 243 F~~Ii~~~~~~ 253 (264)
+.++.+.+.+=
T Consensus 225 ~~~~~~~~~~g 235 (301)
T 1xky_A 225 MQEMIAAFQAG 235 (301)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHH
T ss_conf 99999975202
No 84
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose phosphate pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=50.23 E-value=13 Score=16.95 Aligned_cols=141 Identities=17% Similarity=0.215 Sum_probs=77.3
Q ss_pred HHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCCCCCC
Q ss_conf 67775407310010420002213579999999999998334747998165520333498000111002221000000134
Q gi|254780197|r 83 ANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEFKSSV 162 (264)
Q Consensus 83 a~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~~~~~ 162 (264)
...+.+.|++.+ .=|.|-- +...+.+-++...+.|+.+=+-+--. ...+.+. ..+..++ ..
T Consensus 84 i~~~~~~g~d~i-~~H~E~~-----~~~~~~~~i~~ik~~g~k~Glal~p~-------T~~~~i~----~~l~~vD--~V 144 (230)
T 1rpx_A 84 VPDFIKAGADIV-SVHCEQS-----STIHLHRTINQIKSLGAKAGVVLNPG-------TPLTAIE----YVLDAVD--LV 144 (230)
T ss_dssp HHHHHHTTCSEE-EEECSTT-----TCSCHHHHHHHHHHTTSEEEEEECTT-------CCGGGGT----TTTTTCS--EE
T ss_pred HHHHHHHCCCEE-EEECCCC-----CCCCHHHHHHHHHHCCCEEEEEECCC-------CCHHHHH----HHHHHCC--EE
T ss_conf 999987189536-7513334-----42269999999998798699996899-------9989999----9986579--89
Q ss_pred CEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCHHH
Q ss_conf 11320513530455764311245544679999996332241643088627789878999966898968897434358899
Q gi|254780197|r 163 PVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQHEL 242 (264)
Q Consensus 163 ~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~~~ 242 (264)
++..-+|-. .|+.-.++-.+++. .+|+.+.+ ...++.|-=-|+||.+|+.++.. .++|.+-+|++=.+.++
T Consensus 145 lvMtV~PGf---~GQ~f~~~~l~kI~-~~~~~~~~----~~~~~~I~VDGGIn~~~i~~l~~-~Gad~~V~GS~if~~~d 215 (230)
T 1rpx_A 145 LIMSVNPGF---GGQSFIESQVKKIS-DLRKICAE----RGLNPWIEVDGGVGPKNAYKVIE-AGANALVAGSAVFGAPD 215 (230)
T ss_dssp EEESSCTTC---SSCCCCTTHHHHHH-HHHHHHHH----HTCCCEEEEESSCCTTTHHHHHH-HTCCEEEESHHHHTSSC
T ss_pred EEEEECCCC---CCCCCCHHHHHHHH-HHHHHHHH----CCCCEEEEEECCCCHHHHHHHHH-CCCCEEEECHHHHCCCC
T ss_conf 998876898---75444688999999-99999986----59935899988878899999998-69999997868868999
Q ss_pred HHHHHHHHH
Q ss_conf 999999999
Q gi|254780197|r 243 FLKIVEIVE 251 (264)
Q Consensus 243 F~~Ii~~~~ 251 (264)
..+.++..+
T Consensus 216 ~~~~i~~lk 224 (230)
T 1rpx_A 216 YAEAIKGIK 224 (230)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
T ss_conf 999999999
No 85
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=50.00 E-value=13 Score=16.92 Aligned_cols=44 Identities=14% Similarity=0.020 Sum_probs=27.0
Q ss_pred CCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCHHHHHHHHHHHHH
Q ss_conf 430886277898789999668989688974343588999999999999
Q gi|254780197|r 205 KMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQHELFLKIVEIVER 252 (264)
Q Consensus 205 ~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~~~F~~Ii~~~~~ 252 (264)
+..++.|+.- ..-..+ .-+.+|+.-|-+.+-|+.+.++.+.+.+
T Consensus 182 ~~~v~~g~~~---~~~~~~-~~G~~G~i~~~~n~~P~~~~~l~~~~~~ 225 (293)
T 1f6k_A 182 NHLIWAGFDE---MMLPAA-SLGVDGAIGSTFNVNGVRARQIFELTKA 225 (293)
T ss_dssp TSEEEECCGG---GHHHHH-HTTCSEEEESTHHHHHHHHHHHHHHHHT
T ss_pred CEEEEECCHH---HHHHHH-HCCCCCCCCCCCCCCHHHHHHHHHHHHC
T ss_conf 8489758578---899999-8599853055011164999999999987
No 86
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A
Probab=48.92 E-value=14 Score=16.82 Aligned_cols=45 Identities=13% Similarity=0.185 Sum_probs=29.1
Q ss_pred CCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCHHHHHHHHHHHHH
Q ss_conf 6430886277898789999668989688974343588999999999999
Q gi|254780197|r 204 QKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQHELFLKIVEIVER 252 (264)
Q Consensus 204 ~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~~~F~~Ii~~~~~ 252 (264)
.++.++.| .-. - .-+.+. -+.||+.-|-+..-|+.+.+|++.+.+
T Consensus 213 ~~~~i~~G-~d~-~-~~~~l~-~Ga~G~is~~~n~~P~~~~~l~~a~~~ 257 (343)
T 2v9d_A 213 PHFTVLCG-YDD-H-LFNTLL-LGGDGAISASGNFAPQVSVNLLKAWRD 257 (343)
T ss_dssp TTCEEEES-SGG-G-HHHHHH-TTCCEECCGGGTTCHHHHHHHHHHHHT
T ss_pred CCCCCCCC-CHH-H-HHHHHH-CCCCEEECCCCCCCCHHHHHHHHHHHC
T ss_conf 65350037-578-8-999997-398634125332476569999999987
No 87
>3dhf_A Nicotinamide phosphoribosyltransferase; NMPRTASE, NAMPRTASE, visfatin, beryllium fluoride, nicotinamide D-ribonucleotide, pyrophosphate; HET: NMN; 1.80A {Homo sapiens} PDB: 3dgr_A* 3dhd_A* 3dkj_A* 3dkl_A* 2gvj_A* 2gvg_A* 2e5b_A 2e5c_A* 2e5d_A 2h3d_A* 2gvl_A 2h3b_A 2g95_A 2g96_A* 2g97_A* 3g8e_A*
Probab=48.63 E-value=14 Score=16.79 Aligned_cols=59 Identities=20% Similarity=0.206 Sum_probs=39.1
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCHH---------HCCCEEEECCCCCHHHHHHHHCC-------CCCCEEEECHHH
Q ss_conf 431124554467999999633224---------16430886277898789999668-------989688974343
Q gi|254780197|r 179 PAVVDLEKIHSFVRRILLDRFPEE---------GQKMRILYGGSVDVANAEDFSLI-------ENIDGLLVGGAS 237 (264)
Q Consensus 179 a~~~~i~~~~~~Ir~~l~~~~~~~---------~~~i~ilYGGSV~~~N~~~l~~~-------~~iDG~LVG~AS 237 (264)
.+.-|..+....+|..+-+.++.. .+.++|+||+|++++-+.+|... .+.+.|=||+.=
T Consensus 312 ~DSGD~~~~~~~~~~~l~~~~g~~~~~kg~kvl~~~v~Ii~sd~ld~~~i~~i~~~l~~~g~~~~~~~fGVGt~l 386 (484)
T 3dhf_A 312 PDSGNPLDTVLKVLEILGKKFPVTENSKGYKLLPPYLRVIQGDGVDINTLQEIVEGMKQKMWSIENIAFGSGGGL 386 (484)
T ss_dssp CCSSCHHHHHHHHHHHHHHHSCCEECTTSCEECCTTEEEEECSSCSHHHHHHHHHHHHHTTBCGGGEEEEESHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCC
T ss_conf 899888999999999999864873132223257664379976999999999999999866887876447545641
No 88
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=48.54 E-value=14 Score=16.85 Aligned_cols=44 Identities=32% Similarity=0.404 Sum_probs=34.2
Q ss_pred CCEEEECCCCCHHHHHHHHCCCCCCEEEECHH---HCCHHHHHH-HHHH
Q ss_conf 43088627789878999966898968897434---358899999-9999
Q gi|254780197|r 205 KMRILYGGSVDVANAEDFSLIENIDGLLVGGA---SLQHELFLK-IVEI 249 (264)
Q Consensus 205 ~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~A---Sl~~~~F~~-Ii~~ 249 (264)
-+-+-+||=.+|..+.-++.+ +.||++||+- |-||.+.++ |+++
T Consensus 210 VvnFAAGGIATPADAALMMqL-G~DGVFVGSGIFKS~dP~~rA~AIV~A 257 (305)
T 2nv1_A 210 VVNFAAGGVATPADAALMMQL-GADGVFVGSGIFKSDNPAKFAKAIVEA 257 (305)
T ss_dssp SCEEBCSCCCSHHHHHHHHHT-TCSCEEECGGGGGSSCHHHHHHHHHHH
T ss_pred EEEECCCCCCCHHHHHHHHHC-CCCEEEECCCCCCCCCHHHHHHHHHHH
T ss_conf 367504787988889999973-998799776513679989999999999
No 89
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=47.44 E-value=8.6 Score=18.08 Aligned_cols=155 Identities=11% Similarity=0.063 Sum_probs=84.2
Q ss_pred CCCCCCCCCC---CCHHHHHHHC--CCCEEECC-HHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCC
Q ss_conf 2233343321---2067775407--31001042-0002213579999999999998334747998165520333498000
Q gi|254780197|r 71 IAEYGPYTGD---ISANMLADCG--ANFVILGH-SERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFE 144 (264)
Q Consensus 71 ~~~~GA~TGe---iSa~mL~d~g--~~~viiGH-SERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~ 144 (264)
....|++|-| -.+.|-++.. -+|+=++- .+.+.++-+.-+.+ +-.....+.|+.+..-+....
T Consensus 78 PNTAGc~tAeEAv~~A~lARE~~~~~~~iKLEVi~d~~~L~Pd~~etl-~Aa~~Lvk~gF~VlpY~~dD~---------- 146 (265)
T 1wv2_A 78 PNTAGCYDAVEAVRTCRLARELLDGHNLVKLEVLADQKTLFPNVVETL-KAAEQLVKDGFDVMVYTSDDP---------- 146 (265)
T ss_dssp EECTTCCSHHHHHHHHHHHHTTTTSCCEEEECCBSCTTTCCBCHHHHH-HHHHHHHTTTCEEEEEECSCH----------
T ss_pred CCHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHH-HHHHHHHHCCCEEEECCCCCH----------
T ss_conf 666885469999999999998648985699987469877897788999-999999978977962478469----------
Q ss_pred CCCCCHHHHHHCCCCCCCCEEEECHHHHHCCCCC-CCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHHH
Q ss_conf 1110022210000001341132051353045576-431124554467999999633224164308862778987899996
Q gi|254780197|r 145 VLQKQLDCSLPSEFKSSVPVIAYEPIWAIGTGRV-PAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVDVANAEDFS 223 (264)
Q Consensus 145 ~l~~Ql~~~l~~~~~~~~~iIAYEPvWAIGtG~~-a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~~N~~~l~ 223 (264)
++-++|+.. .+.-+.--=+ -||+|+= .+|..++- |++ . .+-.-|+=+|=-.|..+..-+
T Consensus 147 ~~ak~L~d~-----Gc~avMPlgs---PIGSg~Gi~n~~~l~~----i~~---~-----~~vpviVDAGIG~pSdAa~aM 206 (265)
T 1wv2_A 147 IIARQLAEI-----GCIAVMPLAG---LIGSGLGICNPYNLRI----ILE---E-----AKVPVLVDAGVGTASDAAIAM 206 (265)
T ss_dssp HHHHHHHHS-----CCSEEEECSS---STTCCCCCSCHHHHHH----HHH---H-----CSSCBEEESCCCSHHHHHHHH
T ss_pred HHHHHHHHC-----CCEEECCCCC---CCCCCCCCCCHHHHHH----HHH---C-----CCCEEEEECCCCCHHHHHHHH
T ss_conf 999998754-----9637544832---1011246367789999----985---3-----895299746889788999999
Q ss_pred CCCCCCEEEECHHH---CCHHHHHHHHHHHHHHHHHH
Q ss_conf 68989688974343---58899999999999999984
Q gi|254780197|r 224 LIENIDGLLVGGAS---LQHELFLKIVEIVERVYVDS 257 (264)
Q Consensus 224 ~~~~iDG~LVG~AS---l~~~~F~~Ii~~~~~~~~~~ 257 (264)
.+ ..||+||+.|= -||...++=.+.+-+..+.+
T Consensus 207 El-G~DaVLvNTAIa~a~dP~~MA~A~~~AV~AGR~a 242 (265)
T 1wv2_A 207 EL-GCEAVLMNTAIAHAKDPVMMAEAMKHAIVAGRLA 242 (265)
T ss_dssp HH-TCSEEEESHHHHTSSSHHHHHHHHHHHHHHHHHH
T ss_pred HC-CCCEEEECHHHHCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 71-4888985327563899899999999999999999
No 90
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=47.01 E-value=15 Score=16.63 Aligned_cols=199 Identities=12% Similarity=0.039 Sum_probs=99.5
Q ss_pred CCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEE-CCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCH
Q ss_conf 8506998646568999999999999522234577119996-896559999997325763102220122233343321206
Q gi|254780197|r 5 IRPLVVGNWKMHGLRLSLERIQKIVEGIRRNSCCIDVAIC-PPATLIYESSRLCKTSSVIIGAQDCHIAEYGPYTGDISA 83 (264)
Q Consensus 5 mK~iIigNWKMN~~~~~~~~~~~~~~~~~~~~~~veivi~-Pp~~~L~~~~~~~~~s~I~igAQnv~~~~~GA~TGeiSa 83 (264)
||-++|...++.... .+.+...++. .++++.. -|.........+++.-.-...+. +-.. =.+
T Consensus 1 Mkl~lIT~p~~~~~~--~~~l~~~l~~------Gv~~lqlR~k~~s~~e~~~ll~~i~~~~~~~-liIn--------d~~ 63 (210)
T 3ceu_A 1 MKLIVVTTPTFFVEE--DKIITALFEE------GLDILHLRKPETPAMYSERLLTLIPEKYHRR-IVTH--------EHF 63 (210)
T ss_dssp CEEEEECCSSCCTTH--HHHHHHHHHT------TCCEEEECCSSCCHHHHHHHHHHSCGGGGGG-EEES--------SCT
T ss_pred CEEEEECCCCCCCCH--HHHHHHHHHC------CCCEEEECCCCCCHHHHHHHHHHHHHHHCCE-EEEE--------CCH
T ss_conf 979998189767689--9999999987------9988998379999999999999999972998-9996--------969
Q ss_pred HHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCCCCCCC
Q ss_conf 77754073100104200022135799999999999983347479981655203334980001110022210000001341
Q gi|254780197|r 84 NMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEFKSSVP 163 (264)
Q Consensus 84 ~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~~~~~~ 163 (264)
....++|++.|=+|-..++..+.. .. + ||=+-.. . +++.. .+ ... -
T Consensus 64 ~lA~~~~~dGvHl~~~d~~~~~~~---------------~~--~--Ig~S~H~-----~-----~el~~-~~--~~a--D 109 (210)
T 3ceu_A 64 YLKEEFNLMGIHLNARNPSEPHDY---------------AG--H--VSCSCHS-----V-----EEVKN-RK--HFY--D 109 (210)
T ss_dssp THHHHTTCSEEECCSSSCSCCTTC---------------CS--E--EEEEECS-----H-----HHHHT-TG--GGS--S
T ss_pred HHHHHCCCCEEECCCCCCCCCCCC---------------CC--E--EEEECCC-----H-----HHHHH-HH--HCC--C
T ss_conf 999976998787571221100279---------------97--8--9983599-----9-----99998-86--579--9
Q ss_pred EEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCH---
Q ss_conf 13205135304557643112455446799999963322416430886277898789999668989688974343588---
Q gi|254780197|r 164 VIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQH--- 240 (264)
Q Consensus 164 iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~--- 240 (264)
.+++=|+|.--|-..+.+.. -...++...... ..++||+==|.++++|+.++.+. +.||+-|=++=++.
T Consensus 110 Yv~~gPvf~T~sK~~~~~~~---gl~~l~~~~~~~----~~~~PviAiGGI~~~ni~~l~~~-G~~GvAv~s~i~~~~dp 181 (210)
T 3ceu_A 110 YVFMSPIYDSISKVNYYSTY---TAEELREAQKAK----IIDSKVMALGGINEDNLLEIKDF-GFGGAVVLGDLWNKFDA 181 (210)
T ss_dssp EEEECCCC---------CCC---CHHHHHHHHHTT----CSSTTEEEESSCCTTTHHHHHHT-TCSEEEESHHHHTTCCT
T ss_pred EEEECCCCCCCCCCCCCCCC---CHHHHHHHHHHC----CCCCCEEEECCCCHHHHHHHHHC-CCCEEEEEHHHHCCCCH
T ss_conf 68960567898888854567---869999999851----68998899889899999999983-99989986899769997
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHCC
Q ss_conf ---9999999999999998430002
Q gi|254780197|r 241 ---ELFLKIVEIVERVYVDSCLEDT 262 (264)
Q Consensus 241 ---~~F~~Ii~~~~~~~~~~~~~~~ 262 (264)
.+|...++.++|+..-+.+|..
T Consensus 182 ~~~~~~~~~i~~f~kl~~~~~~~~~ 206 (210)
T 3ceu_A 182 CLDQNYLAVIEHFKKLKKLADLEHH 206 (210)
T ss_dssp TTSSCCHHHHHHHHHHHHHHTCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 8988699999999999999853310
No 91
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=46.51 E-value=15 Score=16.59 Aligned_cols=158 Identities=12% Similarity=0.075 Sum_probs=80.1
Q ss_pred EEECCHHHHHHHHHHHCCCCCCH----HHHHCCCCCCCCCCCCCCHHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHH
Q ss_conf 99689655999999732576310----22201222333433212067775407310010420002213579999999999
Q gi|254780197|r 42 AICPPATLIYESSRLCKTSSVII----GAQDCHIAEYGPYTGDISANMLADCGANFVILGHSERRIGHREDSYVVQSKVK 117 (264)
Q Consensus 42 vi~Pp~~~L~~~~~~~~~s~I~i----gAQnv~~~~~GA~TGeiSa~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~ 117 (264)
.+.|+.-.+..+.+...- ++.+ =+.|..+.+.-=-+=.-...+++++|++.+.+|---.- ++=|....+++.
T Consensus 35 GlTPS~gli~~~~~~~~i-pv~vMIRPR~GdF~Ys~~E~~~M~~dI~~~k~~G~dGvVfG~L~~d---g~iD~~~~~~Li 110 (256)
T 1twd_A 35 GLTPSLGVLKSVRQRVTI-PVHPIIRPRGGDFCYSDGEFAAILEDVRTVRELGFPGLVTGVLDVD---GNVDMPRMEKIM 110 (256)
T ss_dssp CBCCCHHHHHHHHHHCCS-CEEEBCCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTT---SSBCHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHCCC-CEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCC---CCCCHHHHHHHH
T ss_conf 979999999999997399-7499984589988889999999999999999859996788668899---984999999999
Q ss_pred HHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCCCCCCCEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 99833474799816552033349800011100222100000013411320513530455764311245544679999996
Q gi|254780197|r 118 SACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEFKSSVPVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLD 197 (264)
Q Consensus 118 ~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~~~~~~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~ 197 (264)
.+. .++.+.+= +..+.+.+|.+. +....... .+-|+ =+|..++.. +-...|++.+..
T Consensus 111 ~~a-~~l~vTFH-----------RAfD~~~d~~~a-l~~Li~lG-----~~rIL--TSG~~~~a~---~G~~~L~~L~~~ 167 (256)
T 1twd_A 111 AAA-GPLAVTFH-----------RAFDMCANPLYT-LNNLAELG-----IARVL--TSGQKSDAL---QGLSKIMELIAH 167 (256)
T ss_dssp HHH-TTSEEEEC-----------GGGGGCSCHHHH-HHHHHHHT-----CCEEE--ECTTSSSTT---TTHHHHHHHHTS
T ss_pred HHH-CCCCEEEE-----------CCHHHHCCHHHH-HHHHHHCC-----CCEEE--CCCCCCCHH---HHHHHHHHHHHH
T ss_conf 985-76864774-----------425652899999-99999759-----89786--578967777---769999999985
Q ss_pred HCCHHHCCCEEEECCCCCHHHHHHHHCCCCCCEEE
Q ss_conf 33224164308862778987899996689896889
Q gi|254780197|r 198 RFPEEGQKMRILYGGSVDVANAEDFSLIENIDGLL 232 (264)
Q Consensus 198 ~~~~~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~L 232 (264)
+....|+=||.|+++|+.+|.. ..++-+=
T Consensus 168 -----a~~~iIm~GgGI~~~Ni~~l~~-tG~~e~H 196 (256)
T 1twd_A 168 -----RDAPIIMAGAGVRAENLHHFLD-AGVLEVH 196 (256)
T ss_dssp -----SSCCEEEEESSCCTTTHHHHHH-HTCSEEE
T ss_pred -----CCCCEEEEECCCCHHHHHHHHH-CCCCEEE
T ss_conf -----6993899727779999999997-7988798
No 92
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=45.73 E-value=15 Score=16.51 Aligned_cols=54 Identities=22% Similarity=0.138 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCC-CHHHHHHHHCCCCCCEEEECHHHC-CHHHHHH
Q ss_conf 124554467999999633224164308862778-987899996689896889743435-8899999
Q gi|254780197|r 182 VDLEKIHSFVRRILLDRFPEEGQKMRILYGGSV-DVANAEDFSLIENIDGLLVGGASL-QHELFLK 245 (264)
Q Consensus 182 ~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV-~~~N~~~l~~~~~iDG~LVG~ASl-~~~~F~~ 245 (264)
.......+.||+.+ ++||+..|.+ +++-++++++...+|.+-+||+.+ ||+ |..
T Consensus 281 ~~~~~~a~~ik~~~---------~~pvi~~G~i~~~~~ae~~l~~g~~D~V~~gR~~iadPd-~~~ 336 (363)
T 3l5l_A 281 AFMGPIAERVRREA---------KLPVTSAWGFGTPQLAEAALQANQLDLVSVGRAHLADPH-WAY 336 (363)
T ss_dssp TTTHHHHHHHHHHH---------TCCEEECSSTTSHHHHHHHHHTTSCSEEECCHHHHHCTT-HHH
T ss_pred CCHHHHHHHHHHHC---------CCEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCC-HHH
T ss_conf 20057999999865---------930899778699999999998799523475199886914-999
No 93
>3ohe_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE; 1.20A {Marinobacter aquaeolei}
Probab=44.71 E-value=12 Score=17.25 Aligned_cols=31 Identities=10% Similarity=0.173 Sum_probs=26.6
Q ss_pred CHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 5135304557643112455446799999963
Q gi|254780197|r 168 EPIWAIGTGRVPAVVDLEKIHSFVRRILLDR 198 (264)
Q Consensus 168 EPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~ 198 (264)
.|+|..+.....++++.+++...||+.+.++
T Consensus 106 ~pvw~~~~~~~~~~~e~~~l~~klr~~L~~l 136 (137)
T 3ohe_A 106 GPVWGKQPPVPYTEEQQASVKAKLQPLLEQL 136 (137)
T ss_dssp SCCTTSSCCCCCCHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 7722778887799999999999999999963
No 94
>1u1j_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; methionine, synthase, methyltetrahydrofolate; HET: C2F; 2.40A {Arabidopsis thaliana} SCOP: c.1.22.2 c.1.22.2 PDB: 1u1h_A* 1u1u_A 1u22_A*
Probab=43.61 E-value=16 Score=16.31 Aligned_cols=59 Identities=7% Similarity=0.094 Sum_probs=35.9
Q ss_pred EECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEE---EECCCCCHHHHHHHHCCCCCCEEEE
Q ss_conf 2051353045576431124554467999999633224164308---8627789878999966898968897
Q gi|254780197|r 166 AYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEEGQKMRI---LYGGSVDVANAEDFSLIENIDGLLV 233 (264)
Q Consensus 166 AYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~i---lYGGSV~~~N~~~l~~~~~iDG~LV 233 (264)
==||+|+-. .+++..+. .+.....+.. ....+++ .|-|+++.+....+.+.++|||+.+
T Consensus 205 lDEP~l~~d----~~~~~~~~----~~~ay~~L~~-~~~~~~i~l~tyfg~~~~~~~~~L~~~~~vd~l~l 266 (765)
T 1u1j_A 205 LDEPVLVMD----LEGQKLQA----FTGAYAELES-TLSGLNVLVETYFADIPAEAYKTLTSLKGVTAFGF 266 (765)
T ss_dssp EECGGGGSC----CCHHHHHH----HHHHHHHSTT-TTCSSEEEEECCSSCCCHHHHHHHTTCTTCCEEEE
T ss_pred ECCCCCCCC----CCHHHHHH----HHHHHHHHHH-CCCCCEEEEEEECCCCCCHHHHHHHHCCCCCEEEE
T ss_conf 648752678----99999999----9999999984-27998599987048876046998852789746999
No 95
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=43.42 E-value=15 Score=16.52 Aligned_cols=139 Identities=14% Similarity=0.113 Sum_probs=63.6
Q ss_pred CCCCHHHHHHHCCCCE--EE--CCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEC---CCCCHHHHCCCCCCCCCCCHH
Q ss_conf 2120677754073100--10--4200022135799999999999983347479981---655203334980001110022
Q gi|254780197|r 79 GDISANMLADCGANFV--IL--GHSERRIGHREDSYVVQSKVKSACNAGLYPIVCI---GETDEEYRSGRTFEVLQKQLD 151 (264)
Q Consensus 79 GeiSa~mL~d~g~~~v--ii--GHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCi---GE~~~e~~~~~~~~~l~~Ql~ 151 (264)
..+|+...+..|++.| ++ |.+|-- .+..+.+.+=...|.+.|+-.++=+ +...++. ....+.+..=..
T Consensus 110 ~~~sv~~~~~~GadaVk~lv~~~pdd~~---~~~~~~l~~l~~~c~~~g~p~llE~~~~~~~~~d~--~~~~~~i~~a~r 184 (304)
T 1to3_A 110 KKINAQAVKRDGAKALKLLVLWRSDEDA---QQRLNMVKEFNELCHSNGLLSIIEPVVRPPRCGDK--FDREQAIIDAAK 184 (304)
T ss_dssp SSCCHHHHHHTTCCEEEEEEEECTTSCH---HHHHHHHHHHHHHHHTTTCEEEEEEEECCCSSCSC--CCHHHHHHHHHH
T ss_pred CCCCHHHHHHCCCCEEEEEEECCCCCCH---HHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCC--CCHHHHHHHHHH
T ss_conf 4547999985648789999862897228---99999999999999863996699985147776654--107999999999
Q ss_pred HHHHCCCCCCCCEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEE-CCCCCHHHHHHHHC---CCC
Q ss_conf 21000000134113205135304557643112455446799999963322416430886-27789878999966---898
Q gi|254780197|r 152 CSLPSEFKSSVPVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEEGQKMRILY-GGSVDVANAEDFSL---IEN 227 (264)
Q Consensus 152 ~~l~~~~~~~~~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilY-GGSV~~~N~~~l~~---~~~ 227 (264)
.+.. ...+.+-+.|+ ..+-+ .-.+.....++.. .+..+|+++ ||.++.+...+.+. ...
T Consensus 185 -~~~e-~G~Di~K~~~P-~~~~~--------~~~~~~~~~~~~~------~~~~~p~vvLggg~~~e~f~~~l~~A~~aG 247 (304)
T 1to3_A 185 -ELGD-SGADLYKVEMP-LYGKG--------ARSDLLTASQRLN------GHINMPWVILSSGVDEKLFPRAVRVAMEAG 247 (304)
T ss_dssp -HHTT-SSCSEEEECCG-GGGCS--------CHHHHHHHHHHHH------HTCCSCEEECCTTSCTTTHHHHHHHHHHTT
T ss_pred -HHHH-CCCCEEEEECC-CCCCH--------HHHHHHHHHHHHH------CCCCCCEEEECCCCCHHHHHHHHHHHHHCC
T ss_conf -9987-39987999788-77532--------2468999999985------158994899828989899999999999769
Q ss_pred CCEEEECHHHCC
Q ss_conf 968897434358
Q gi|254780197|r 228 IDGLLVGGASLQ 239 (264)
Q Consensus 228 iDG~LVG~ASl~ 239 (264)
.-||++||+=+.
T Consensus 248 a~G~~~GR~iwq 259 (304)
T 1to3_A 248 ASGFLAGRAVWS 259 (304)
T ss_dssp CCEEEESHHHHG
T ss_pred CEEEEECHHHHH
T ss_conf 939985626434
No 96
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolase, D-tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A*
Probab=43.04 E-value=17 Score=16.25 Aligned_cols=208 Identities=12% Similarity=0.100 Sum_probs=88.4
Q ss_pred CHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHHH-CCCC-CCC---CCCCCCCHHHHHHHCCC
Q ss_conf 999999999999522234577119996896559999997325763102220-1222-333---43321206777540731
Q gi|254780197|r 18 LRLSLERIQKIVEGIRRNSCCIDVAICPPATLIYESSRLCKTSSVIIGAQD-CHIA-EYG---PYTGDISANMLADCGAN 92 (264)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~veivi~Pp~~~L~~~~~~~~~s~I~igAQn-v~~~-~~G---A~TGeiSa~mL~d~g~~ 92 (264)
....+..+.+.+......... -|.+=|-| .+........+..+.+..-. -+.. ..+ ......|++-.+.+|++
T Consensus 48 ~~~~l~~~K~li~~~l~~~as-giLlD~~y-G~~al~~~~~~~gliv~~e~sg~~~~~~~~~~~~~~~~sv~~~~~~Gad 125 (332)
T 3iv3_A 48 TVAQMEELKVLVSEELTPYAS-SILLDPEY-GLPAAQARDREAGLLLAYEKTGYDANTTSRLPDCLVDWSIKRLKEAGAD 125 (332)
T ss_dssp CHHHHHHHHHHHHHHHGGGSS-EEEECTTT-CHHHHHTSCTTCEEEEECBCCCCCTTSSCCCCCBCTTCCHHHHHHTTCS
T ss_pred CHHHHHHHHHHHHHHCCCCCC-EEEECHHH-HHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCC
T ss_conf 677899999999997036898-89963324-4699985067961899985677777877766532346789999856788
Q ss_pred CEEEC---CHHCCCC-CCCCHHHHHHHHHHHHHCCCCEEEEC---CCCCHHHHCCCCCCCCCCCHHHHHHCC-----CCC
Q ss_conf 00104---2000221-35799999999999983347479981---655203334980001110022210000-----001
Q gi|254780197|r 93 FVILG---HSERRIG-HREDSYVVQSKVKSACNAGLYPIVCI---GETDEEYRSGRTFEVLQKQLDCSLPSE-----FKS 160 (264)
Q Consensus 93 ~viiG---HSERR~~-~~E~d~~I~~K~~~al~~~l~pIlCi---GE~~~e~~~~~~~~~l~~Ql~~~l~~~-----~~~ 160 (264)
.|-+- |++...- ..+.-+.+.+=...|.+.|+-.++=+ |+...+. .+.++....-+.++... ...
T Consensus 126 aVK~lv~~~~d~~~e~~~~q~~~l~~l~~~c~~~gip~llE~l~~~~~~~~~---~~~~~~~~~p~~v~~a~~~~~~~e~ 202 (332)
T 3iv3_A 126 AVKFLLYYDVDGDPQVNVQKQAYIERIGSECQAEDIPFFLEILTYDETISNN---SSVEFAKVKVHKVNDAMKVFSAERF 202 (332)
T ss_dssp EEEEEEEECTTSCHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECBTTBSCT---TSHHHHTTHHHHHHHHHHHHTSGGG
T ss_pred EEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC---CCHHHHCCCHHHHHHHHHHHHHCCC
T ss_conf 8999974599841999999999999999999975997599972157777775---3233310166999999999984676
Q ss_pred CCCEEEECH------HHHHCCCCC-CCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEE-CCCCCHHHHHHHHCC-----CC
Q ss_conf 341132051------353045576-43112455446799999963322416430886-277898789999668-----98
Q gi|254780197|r 161 SVPVIAYEP------IWAIGTGRV-PAVVDLEKIHSFVRRILLDRFPEEGQKMRILY-GGSVDVANAEDFSLI-----EN 227 (264)
Q Consensus 161 ~~~iIAYEP------vWAIGtG~~-a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilY-GGSV~~~N~~~l~~~-----~~ 227 (264)
..-++=-|| +=.++.+.. -+.+ +.....++.. .+..+|+++ ||.++.+...+.+.. +.
T Consensus 203 g~Di~K~e~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~------~~~~~P~VvLg~G~~~e~f~~~l~~A~~aGa~ 273 (332)
T 3iv3_A 203 GIDVLKVEVPVNMVYVEGFAEGEVVYSKE---EAAQAFREQE------ASTDLPYIYLSAGVSAELFQETLVFAHKAGAK 273 (332)
T ss_dssp CCSEEEECCSSCGGGBTTTCSSCCCBCHH---HHHHHHHHHH------HTCSSCEEEECTTCCHHHHHHHHHHHHHHTCC
T ss_pred CCCEEEECCCCCHHHHHHCCCCCCCCCHH---HHHHHHHHHH------CCCCCCEEEECCCCCHHHHHHHHHHHHHHCCC
T ss_conf 99889812898776653023210002479---9999999975------14798389983998989999999999982999
Q ss_pred CCEEEECHHHCC
Q ss_conf 968897434358
Q gi|254780197|r 228 IDGLLVGGASLQ 239 (264)
Q Consensus 228 iDG~LVG~ASl~ 239 (264)
+.||++||+=+.
T Consensus 274 ~sGf~~GR~iw~ 285 (332)
T 3iv3_A 274 FNGVLCGRATWA 285 (332)
T ss_dssp CCEEEECHHHHT
T ss_pred CEEEEECHHHHH
T ss_conf 638983447648
No 97
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=42.59 E-value=12 Score=17.12 Aligned_cols=55 Identities=11% Similarity=0.096 Sum_probs=41.4
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCC
Q ss_conf 4311245544679999996332241643088627789878999966898968897434358
Q gi|254780197|r 179 PAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQ 239 (264)
Q Consensus 179 a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~ 239 (264)
-+|+++.++...+|..... ..++.|.--|.+|++|+.++.. .+||.+=+|..-.+
T Consensus 228 ~~~~~~k~~v~~l~~~~~~-----~~~v~ieaSGGI~~~ni~~ya~-tGvD~Is~g~lt~~ 282 (294)
T 3c2e_A 228 FKGDGLKMCAQSLKNKWNG-----KKHFLLECSGGLNLDNLEEYLC-DDIDIYSTSSIHQG 282 (294)
T ss_dssp --------------------------CCEEEEECCCCC------CC-CSCSEEECGGGTSS
T ss_pred CCHHHHHHHHHHHHHHHCC-----CCCEEEEEECCCCHHHHHHHHH-CCCCEEEECHHHCC
T ss_conf 9979999999999877544-----8857999989999999999998-49899993977719
No 98
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthesis, lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=42.40 E-value=17 Score=16.19 Aligned_cols=45 Identities=16% Similarity=0.233 Sum_probs=28.1
Q ss_pred CCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCHHHHHHHHHHHHH
Q ss_conf 6430886277898789999668989688974343588999999999999
Q gi|254780197|r 204 QKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQHELFLKIVEIVER 252 (264)
Q Consensus 204 ~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~~~F~~Ii~~~~~ 252 (264)
+...++.|..- ..-..+. -+.||++.|.+..-|+.+.+|++.+.+
T Consensus 179 ~~~~~~~G~~~---~~~~~~~-~Ga~G~~~~~~~~~p~~~~~i~~~~~~ 223 (292)
T 2ojp_A 179 DDFVLLSGDDA---SALDFMQ-YGGHGVISVTANVAARDMAQMCKLAAE 223 (292)
T ss_dssp TTSBCEESCGG---GHHHHHH-TTCCEEEESGGGTCHHHHHHHHHHHHT
T ss_pred CCCEEEECCHH---HHHHHHH-CCCEEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 98189853578---6547875-796599833335670777789999986
No 99
>1xvl_A Mn transporter, MNTC protein; manganese, ABC-type transport systems, photosynthesis, cyanobacteria, disulfide bond, metal transport; 2.90A {Synechocystis SP} SCOP: c.92.2.2
Probab=41.84 E-value=18 Score=16.14 Aligned_cols=92 Identities=13% Similarity=0.107 Sum_probs=56.5
Q ss_pred CCCCEEEECHHHH---------------HCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHHHC
Q ss_conf 1341132051353---------------0455764311245544679999996332241643088627789878999966
Q gi|254780197|r 160 SSVPVIAYEPIWA---------------IGTGRVPAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVDVANAEDFSL 224 (264)
Q Consensus 160 ~~~~iIAYEPvWA---------------IGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~~N~~~l~~ 224 (264)
..+.++.|+|.|. ++++..|++.++.++...||+. .---|+|-=..++..++.|.+
T Consensus 203 ~~~~~v~~H~af~Y~~~~ygl~~~~~~~~~~~~eps~~~l~~l~~~ik~~---------~v~~if~e~~~~~~~~~~la~ 273 (321)
T 1xvl_A 203 NQRFLVSCEGAFSYLARDYGMEEIYMWPINAEQQFTPKQVQTVIEEVKTN---------NVPTIFCESTVSDKGQKQVAQ 273 (321)
T ss_dssp GGCEEEEEESTTHHHHHHTTCEEEEEESSSSSCSCCHHHHHHHHHHHHTT---------TCSEEEEETTSCSHHHHHHHT
T ss_pred CCCEEEEECCHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHC---------CCCEEEECCCCCCHHHHHHHH
T ss_conf 66179982717899999869936751365775667899999999999864---------983899728989499999999
Q ss_pred CCCCCEE--E----ECHHHCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8989688--9----7434358899999999999999984300
Q gi|254780197|r 225 IENIDGL--L----VGGASLQHELFLKIVEIVERVYVDSCLE 260 (264)
Q Consensus 225 ~~~iDG~--L----VG~ASl~~~~F~~Ii~~~~~~~~~~~~~ 260 (264)
.-++-.. + +|...-+.+.|.++++.--+...++-.+
T Consensus 274 e~~~~~~~~~~~d~l~~~~~~~~~Y~~~m~~N~~~l~~aL~~ 315 (321)
T 1xvl_A 274 ATGARFGGNLYVDSLSTEEGPVPTFLDLLEYDARVITNGLLA 315 (321)
T ss_dssp TTCCEEEEEECSSCCCCSSSSCCSHHHHHHHHHHHHHTTSSS
T ss_pred HHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 859971363210368888988678999999999999999725
No 100
>2wag_A Lysozyme, putative; hydrolase, GH25, lysin; 1.40A {Bacillus anthracis}
Probab=41.43 E-value=18 Score=16.10 Aligned_cols=49 Identities=16% Similarity=0.140 Sum_probs=39.6
Q ss_pred CCCCCCCHHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEE
Q ss_conf 4332120677754073100104200022135799999999999983347479
Q gi|254780197|r 76 PYTGDISANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPI 127 (264)
Q Consensus 76 A~TGeiSa~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pI 127 (264)
.|.|.|....|+..|+++|||-=+|-..+. |.....-++.|.++||.+=
T Consensus 23 ~~qg~idw~~lk~~Gv~FviiKateG~~~~---D~~f~~n~~~A~~aGl~vG 71 (220)
T 2wag_A 23 SYQGDIDWRELEKQNMKFAFIKATEGSAFV---DKYFSKNWTNANKTSMRVG 71 (220)
T ss_dssp GGGCSCCHHHHHTTTCCEEEEEEEETTTEE---CTTHHHHHHHHHTSSSEEE
T ss_pred CCCCCCCHHHHHHCCCEEEEEEEECCCCCC---CHHHHHHHHHHHHCCCEEE
T ss_conf 989987999999779909999997599868---8468999999998498399
No 101
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis}
Probab=41.31 E-value=18 Score=16.09 Aligned_cols=77 Identities=10% Similarity=0.072 Sum_probs=46.1
Q ss_pred EEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCHHHH
Q ss_conf 13205135304557643112455446799999963322416430886277898789999668989688974343588999
Q gi|254780197|r 164 VIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQHELF 243 (264)
Q Consensus 164 iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~~~F 243 (264)
.|..-|++.--|-....|- -...++++... -++||+==|.++++|+.+++. ...||+-|+++=+..++-
T Consensus 133 Yi~~gpif~T~tK~~~~~~----g~~~l~~~~~~------~~~PvvAiGGI~~~ni~~~~~-~Ga~gvav~s~I~~~~dp 201 (221)
T 1yad_A 133 YVLFGHVFETDCKKGLEGR----GVSLLSDIKQR------ISIPVIAIGGMTPDRLRDVKQ-AGADGIAVMSGIFSSAEP 201 (221)
T ss_dssp EEEEECCC----------C----HHHHHHHHHHH------CCSCEEEESSCCGGGHHHHHH-TTCSEEEESHHHHTSSSH
T ss_pred EEEECCCCCCCCCCCCHHH----HHHHHHHHHHC------CCCCEEEECCCCHHHHHHHHH-CCCCEEEEEHHHHCCCCH
T ss_conf 7830677666666531033----67888764003------567679867989999999998-099889984999779999
Q ss_pred HHHHHHHH
Q ss_conf 99999999
Q gi|254780197|r 244 LKIVEIVE 251 (264)
Q Consensus 244 ~~Ii~~~~ 251 (264)
.+.++.+.
T Consensus 202 ~~~~~~~~ 209 (221)
T 1yad_A 202 LEAARRYS 209 (221)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
T ss_conf 99999999
No 102
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho gluconate aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=39.39 E-value=19 Score=15.90 Aligned_cols=42 Identities=17% Similarity=0.290 Sum_probs=24.4
Q ss_pred CCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCHHHHHHHHHHHH
Q ss_conf 43088627789878999966898968897434358899999999999
Q gi|254780197|r 205 KMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQHELFLKIVEIVE 251 (264)
Q Consensus 205 ~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~~~F~~Ii~~~~ 251 (264)
++.| |+|+- .-....+ -+.+|+.-|-+.+-|+.+.++.+.+.
T Consensus 171 ~~~v-~~G~~--~~~~~~~--~Ga~G~is~~~n~~P~~~~~~~~~~~ 212 (288)
T 2nuw_A 171 GVKV-YNGSN--TLIYYSL--LSLDGVVASFTNFIPEVIVKQRDLIK 212 (288)
T ss_dssp TCEE-EECCG--GGHHHHH--TTSSEEECGGGGTCHHHHHHHHHHHH
T ss_pred CCEE-ECCHH--HHHHHHH--CCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 9279-76778--8998885--67996613431548899999999987
No 103
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MCSG, protein structure initiative; 1.20A {Agrobacterium tumefaciens str}
Probab=39.26 E-value=19 Score=15.89 Aligned_cols=40 Identities=15% Similarity=0.098 Sum_probs=26.1
Q ss_pred CCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCHHHHHHHHH
Q ss_conf 43088627789878999966898968897434358899999999
Q gi|254780197|r 205 KMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQHELFLKIVE 248 (264)
Q Consensus 205 ~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~~~F~~Ii~ 248 (264)
+..++.|+ ....-..+. -+.||+.-|-+.+-|+.+.+++.
T Consensus 187 ~~~v~~G~---d~~~~~~~~-~G~~G~is~~~n~~p~~~~~l~~ 226 (294)
T 3b4u_A 187 DLAILIGD---ERDLARGVR-LGGQGAISGVANFLTQEVRAMAV 226 (294)
T ss_dssp TSEEEECC---HHHHHHHHH-TTCCEEEESGGGTCHHHHHHHHT
T ss_pred CCCEECCC---HHHHHHHHH-CCCCEEECCHHHHHHHHHHHHHH
T ss_conf 76256683---365407762-48972410388889999999998
No 104
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=39.19 E-value=18 Score=16.13 Aligned_cols=149 Identities=19% Similarity=0.240 Sum_probs=75.8
Q ss_pred CCCEEEEECCHHHHHHHHHHHC-CCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHH
Q ss_conf 7711999689655999999732-576310222012223334332120677754073100104200022135799999999
Q gi|254780197|r 37 CCIDVAICPPATLIYESSRLCK-TSSVIIGAQDCHIAEYGPYTGDISANMLADCGANFVILGHSERRIGHREDSYVVQSK 115 (264)
Q Consensus 37 ~~veivi~Pp~~~L~~~~~~~~-~s~I~igAQnv~~~~~GA~TGeiSa~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K 115 (264)
..+||-+--|. .+..+..+.+ ..++.+|+=.+-.. -.+....+.|++|.+-=| =+.++++
T Consensus 43 ~~iEItl~tp~-a~~~i~~l~~~~p~~~iGaGTV~~~--------e~~~~a~~aGa~FivsP~--------~~~~v~~-- 103 (214)
T 1wbh_A 43 RVLNVTLRTEC-AVDAIRAIAKEVPEAIVGAGTVLNP--------QQLAEVTEAGAQFAISPG--------LTEPLLK-- 103 (214)
T ss_dssp CEEEEESCSTT-HHHHHHHHHHHCTTSEEEEESCCSH--------HHHHHHHHHTCSCEEESS--------CCHHHHH--
T ss_pred CEEEEECCCHH-HHHHHHHHHHHCCCCEEEECCCCCH--------HHHHHHHHCCCCEEECCC--------CCHHHHH--
T ss_conf 88999379867-9999999998789967952454536--------899999981998998589--------9999999--
Q ss_pred HHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCCCCCCCEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 99998334747998165520333498000111002221000000134113205135304557643112455446799999
Q gi|254780197|r 116 VKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEFKSSVPVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRIL 195 (264)
Q Consensus 116 ~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~~~~~~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l 195 (264)
.|.++++-.|-=+--.-|-.. =++.+. + ++=.=|.=+.| -..+||..
T Consensus 104 --~a~~~~i~~iPGv~TpsEi~~----------A~~~G~------~--~vK~FPA~~~G------------g~~~ik~l- 150 (214)
T 1wbh_A 104 --AATEGTIPLIPGISTVSELML----------GMDYGL------K--EFKFFPAEANG------------GVKALQAI- 150 (214)
T ss_dssp --HHHHSSSCEEEEESSHHHHHH----------HHHTTC------C--EEEETTTTTTT------------HHHHHHHH-
T ss_pred --HHHHCCCCCCCCCCCHHHHHH----------HHHCCC------C--EEEECHHHHCC------------HHHHHHHH-
T ss_conf --998549975378498899999----------998599------9--59976024208------------09899987-
Q ss_pred HHHCCHHHCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCHHHH
Q ss_conf 963322416430886277898789999668989688974343588999
Q gi|254780197|r 196 LDRFPEEGQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQHELF 243 (264)
Q Consensus 196 ~~~~~~~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~~~F 243 (264)
+.-| .+++++==|.|+++|+.++++...+ +.+||..|-+++.
T Consensus 151 ~~p~----p~i~~~ptGGV~~~n~~~~l~ag~v--~~~~Gs~l~~~~~ 192 (214)
T 1wbh_A 151 AGPF----SQVRFCPTGGISPANYRDYLALKSV--LCIGGSWLVPADA 192 (214)
T ss_dssp HTTC----TTCEEEEBSSCCTTTHHHHHTSTTB--SCEEEGGGSCHHH
T ss_pred HHHC----CCCEEEEECCCCHHHHHHHHHCCCE--EEEECHHHCCHHH
T ss_conf 4213----3770765479888899999958997--9998835379777
No 105
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A
Probab=38.64 E-value=20 Score=15.83 Aligned_cols=48 Identities=15% Similarity=0.097 Sum_probs=26.2
Q ss_pred HHHHHHHCCCCEEECCHHCCC-------CCCC-CHHHHHHHHHHHHHCCCCEEEEC
Q ss_conf 677754073100104200022-------1357-99999999999983347479981
Q gi|254780197|r 83 ANMLADCGANFVILGHSERRI-------GHRE-DSYVVQSKVKSACNAGLYPIVCI 130 (264)
Q Consensus 83 a~mL~d~g~~~viiGHSERR~-------~~~E-~d~~I~~K~~~al~~~l~pIlCi 130 (264)
...|++.|++.|=|.=+-.+. .+.+ .-+.+.+=+..|.++||.+|+++
T Consensus 34 ~~~i~~~G~n~vRipi~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~gi~vildl 89 (343)
T 1ceo_A 34 IETIAEAGFDHVRLPFDYPIIESDDNVGEYKEDGLSYIDRCLEWCKKYNLGLVLDM 89 (343)
T ss_dssp HHHHHHHTCCEEEEEEEGGGTBCSSSTTCBCHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHCCCCEEECCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEE
T ss_conf 99999879988994557999227888874588999999999999997699799983
No 106
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefaciens STR. C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=38.30 E-value=20 Score=15.79 Aligned_cols=46 Identities=17% Similarity=0.155 Sum_probs=33.7
Q ss_pred HCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCHHHHHHHHHHHHH
Q ss_conf 16430886277898789999668989688974343588999999999999
Q gi|254780197|r 203 GQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQHELFLKIVEIVER 252 (264)
Q Consensus 203 ~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~~~F~~Ii~~~~~ 252 (264)
.++..+++||. ..+-+.+ .-..+|+.-|.+.+-|+.+.+|++++.+
T Consensus 215 ~~~~~v~~g~d---~~~~~~~-~~G~~G~is~~~n~~P~~~~~l~~a~~~ 260 (332)
T 2r8w_A 215 SDDFAIGYSGD---WGCTDAT-LAGGDTWYSVVAGLLPVPALQLMRAAQA 260 (332)
T ss_dssp CTTCEEEECCH---HHHHHHH-HTTCSEEEESGGGTCHHHHHHHHHHHHT
T ss_pred CCCCEEEECCH---HHHHHHH-HCCCCEEEEECCCCCCHHHHHHHHHHHC
T ss_conf 88734872552---8888777-5389889981302264044567876415
No 107
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=37.69 E-value=20 Score=15.73 Aligned_cols=49 Identities=6% Similarity=0.093 Sum_probs=31.6
Q ss_pred CCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCHHHHHHHHHHHHHHHHH
Q ss_conf 64308862778987899996689896889743435889999999999999998
Q gi|254780197|r 204 QKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQHELFLKIVEIVERVYVD 256 (264)
Q Consensus 204 ~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~~~F~~Ii~~~~~~~~~ 256 (264)
+++.++ +|+- ...-..+.. +.+|++.|.+..-|+.+.++++.+.+--.+
T Consensus 179 ~~~~v~-~G~~--~~~~~~~~~-G~~G~~~~~~n~~p~~~~~~~~~~~~g~~~ 227 (294)
T 2ehh_A 179 ESFSVL-SGDD--SLTLPMMAL-GAKGVISVANNVMPREVKELIRAALEGDFR 227 (294)
T ss_dssp TTSEEE-ESSG--GGHHHHHHT-TCCEEEESGGGTCHHHHHHHHHHHHHTCHH
T ss_pred CCEEEE-ECCH--HHHHHHHCC-CCCEEECCHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 987999-6766--876666305-998222223113768889999998632079
No 108
>3noe_A DAP-A, dihydrodipicolinate synthase; Lys biosynthesis pathway, lyase; 2.95A {Pseudomonas aeruginosa}
Probab=37.22 E-value=21 Score=15.69 Aligned_cols=45 Identities=11% Similarity=0.142 Sum_probs=29.1
Q ss_pred CCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCHHHHHHHHHHHHH
Q ss_conf 6430886277898789999668989688974343588999999999999
Q gi|254780197|r 204 QKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQHELFLKIVEIVER 252 (264)
Q Consensus 204 ~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~~~F~~Ii~~~~~ 252 (264)
+++.++.|+..- .-..+ .-..+|..-|.+...|+.+.++++.+.+
T Consensus 179 ~~~~v~~g~~~~---~~~~~-~~Ga~G~~~~~~~~~p~~~~~~~~~~~~ 223 (292)
T 3noe_A 179 KDFLVYSGDDAT---AVELM-LLGGKGNISVTANVAPRAMSDLCAAAMR 223 (292)
T ss_dssp TTSEEEECCTTT---HHHHH-HTTCCEEEESGGGTCHHHHHHHHHHHHH
T ss_pred CCCEEEECCHHH---HCHHH-HCCCCCCCCCHHHHCCHHHHHHHHHHHC
T ss_conf 995998574131---12487-6599763322043162888998999988
No 109
>3i24_A HIT family hydrolase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.50A {Vibrio fischeri ES114}
Probab=36.95 E-value=11 Score=17.31 Aligned_cols=34 Identities=21% Similarity=0.305 Sum_probs=29.6
Q ss_pred CHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCH
Q ss_conf 5135304557643112455446799999963322
Q gi|254780197|r 168 EPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPE 201 (264)
Q Consensus 168 EPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~ 201 (264)
.|+|.-+.....++++.+++...||+.+.+..+.
T Consensus 106 ~~vw~~~~~~~~~~ee~~~l~~~Ir~~L~~l~~~ 139 (149)
T 3i24_A 106 GPVWGNTTGVIRAQSSQTQLVDLLRDKLSNISGF 139 (149)
T ss_dssp SCSTTCSCCCBCCHHHHHHHHHHHHHHHTTSTTC
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
T ss_conf 7623788886599999999999999999706263
No 110
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} PDB: 3exs_A* 3ext_A
Probab=35.93 E-value=22 Score=15.56 Aligned_cols=133 Identities=16% Similarity=0.115 Sum_probs=61.2
Q ss_pred CCCCCHHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCC
Q ss_conf 32120677754073100104200022135799999999999983347479981655203334980001110022210000
Q gi|254780197|r 78 TGDISANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSE 157 (264)
Q Consensus 78 TGeiSa~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~ 157 (264)
+|+.-..++.+.|++++.+ |++- ..+.+..-...+.+.+..++.+..+.... .+.+ ++......
T Consensus 70 ip~t~~~~~~~~gad~itv-h~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~----~~~~~~~~- 133 (221)
T 3exr_A 70 AGGTVAKNNAVRGADWMTC-ICSA------TIPTMKAARKAIEDINPDKGEIQVELYGD----WTYD----QAQQWLDA- 133 (221)
T ss_dssp CHHHHHHHHHTTTCSEEEE-ETTS------CHHHHHHHHHHHHHHCTTTCEEEEECCSS----CCHH----HHHHHHHT-
T ss_pred CCHHHHHHHHHHCCCEEEE-CHHH------HHHHHHHHHHHHHHHHHCCCEEEEECCCC----CCHH----HHHHHHHC-
T ss_conf 8205789998716989998-0411------38899999999997400263789872689----9999----99998854-
Q ss_pred CCCCCCE--EEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHHHCCCCCCEEEECH
Q ss_conf 0013411--32051353045576431124554467999999633224164308862778987899996689896889743
Q gi|254780197|r 158 FKSSVPV--IAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVDVANAEDFSLIENIDGLLVGG 235 (264)
Q Consensus 158 ~~~~~~i--IAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ 235 (264)
....++ .++.|.-+ |.+..++.+ ..+|+.... .+.|-=-|.+++++.++... .+.|++-|||
T Consensus 134 -~~~~~~~~~~~~~~~~---~~~~~~~~~----~~vr~~~~~-------~~~I~v~GGi~~~~~~~~~~-~Gad~iVVGr 197 (221)
T 3exr_A 134 -GISQAIYHQSRDALLA---GETWGEKDL----NKVKKLIEM-------GFRVSVTGGLSVDTLKLFEG-VDVFTFIAGR 197 (221)
T ss_dssp -TCCEEEEECCHHHHHH---TCCCCHHHH----HHHHHHHHH-------TCEEEEESSCCGGGGGGGTT-CCCSEEEECH
T ss_pred -CCCEEEEEECCCCCCC---CCCCCHHHH----HHHHHHHCC-------CCEEEECCCCCCCCHHHHHH-CCCCEEEECC
T ss_conf -6335987642656656---776799999----999997436-------97065579868478999998-6989999881
Q ss_pred HHCCHHH
Q ss_conf 4358899
Q gi|254780197|r 236 ASLQHEL 242 (264)
Q Consensus 236 ASl~~~~ 242 (264)
|=..+++
T Consensus 198 aI~~a~d 204 (221)
T 3exr_A 198 GITEAKN 204 (221)
T ss_dssp HHHTSSS
T ss_pred HHCCCCC
T ss_conf 4317999
No 111
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=35.68 E-value=22 Score=15.53 Aligned_cols=32 Identities=22% Similarity=0.370 Sum_probs=27.0
Q ss_pred CCCEEEECCCCCHHHHHHHHCCCCCCEEEECHH
Q ss_conf 643088627789878999966898968897434
Q gi|254780197|r 204 QKMRILYGGSVDVANAEDFSLIENIDGLLVGGA 236 (264)
Q Consensus 204 ~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~A 236 (264)
+++.+.=-|.+|++|+.++.. .+||++=+|..
T Consensus 251 ~~v~ieaSGGI~~~ni~~ya~-~GVD~Is~g~l 282 (296)
T 1qap_A 251 GQARLEVSGNVTAETLREFAE-TGVDFISVGAL 282 (296)
T ss_dssp TTCCEEECCCSCHHHHHHHHH-TTCSEEECSHH
T ss_pred CCEEEEEECCCCHHHHHHHHH-CCCCEEECCHH
T ss_conf 967999979999999999997-69899982855
No 112
>3i4s_A Histidine triad protein; hydrolase, phosphatase, HIT superfamily, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.75A {Bradyrhizobium japonicum}
Probab=35.32 E-value=18 Score=16.10 Aligned_cols=28 Identities=18% Similarity=0.453 Sum_probs=24.0
Q ss_pred CHHHHHCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 5135304557643112455446799999
Q gi|254780197|r 168 EPIWAIGTGRVPAVVDLEKIHSFVRRIL 195 (264)
Q Consensus 168 EPvWAIGtG~~a~~~~i~~~~~~Ir~~l 195 (264)
.|+|+.......++++.++..+.||+.|
T Consensus 111 ~pvw~~~~~~~~d~~e~~~~~~~ir~~L 138 (149)
T 3i4s_A 111 RPVWGVMQPLAHDATEVQNFISALRRKI 138 (149)
T ss_dssp SCCTTTSCCCCCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 7702678887799999999999999987
No 113
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=35.22 E-value=22 Score=15.49 Aligned_cols=46 Identities=11% Similarity=0.104 Sum_probs=26.3
Q ss_pred HCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCHHHHHHHHHHHHH
Q ss_conf 16430886277898789999668989688974343588999999999999
Q gi|254780197|r 203 GQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQHELFLKIVEIVER 252 (264)
Q Consensus 203 ~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~~~F~~Ii~~~~~ 252 (264)
.+++.++.|+.- ..-..+. -+.+|+.-|.+.+-|+.+.+|.+.+.+
T Consensus 184 ~~~~~v~~G~d~---~~~~~~~-~G~~G~i~~~~n~~P~~~~~i~~a~~~ 229 (311)
T 3h5d_A 184 PEEFLIYTGEDG---DAFHAMN-LGADGVISVASHTNGDEMHEMFTAIAE 229 (311)
T ss_dssp CSSCEEEECCGG---GHHHHHH-HTCCEEEESTHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCHH---HHHHHHH-CCCEEEEECCCCCCCHHHHHHHHHHHC
T ss_conf 987268407357---6768885-495378863023473899999998767
No 114
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=34.69 E-value=23 Score=15.43 Aligned_cols=40 Identities=15% Similarity=0.043 Sum_probs=32.8
Q ss_pred CCEEEECCCC-CHHHHHHHHCCCCCCEEEECHHHC-CHHHHHH
Q ss_conf 4308862778-987899996689896889743435-8899999
Q gi|254780197|r 205 KMRILYGGSV-DVANAEDFSLIENIDGLLVGGASL-QHELFLK 245 (264)
Q Consensus 205 ~i~ilYGGSV-~~~N~~~l~~~~~iDG~LVG~ASl-~~~~F~~ 245 (264)
++||+.-|.+ +++-+++++.....|.+-+||+.+ ||+ |..
T Consensus 277 ~~pvi~~G~i~~~~~ae~~l~~g~aD~V~~gR~~iadPd-~~~ 318 (340)
T 3gr7_A 277 DIPTGAVGLITSGWQAEEILQNGRADLVFLGRELLRNPY-WPY 318 (340)
T ss_dssp TCCEEEESSCCCHHHHHHHHHTTSCSEEEECHHHHHCTT-HHH
T ss_pred CCCEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCC-HHH
T ss_conf 986899727599999999998799413587899987902-999
No 115
>3d3q_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2; 2.70A {Staphylococcus epidermidis atcc 12228}
Probab=33.75 E-value=24 Score=15.34 Aligned_cols=53 Identities=13% Similarity=0.182 Sum_probs=33.2
Q ss_pred CCCCCHHHHHHHCCCCEEECCHHCCCCCCCC--HHHHHHHHHHHHHCCCCEEEECCC
Q ss_conf 3212067775407310010420002213579--999999999998334747998165
Q gi|254780197|r 78 TGDISANMLADCGANFVILGHSERRIGHRED--SYVVQSKVKSACNAGLYPIVCIGE 132 (264)
Q Consensus 78 TGeiSa~mL~d~g~~~viiGHSERR~~~~E~--d~~I~~K~~~al~~~l~pIlCiGE 132 (264)
|+-.|.+.+ -++.+-+||+-+--..|+-. -....+.+....+.|-.||+|=|-
T Consensus 51 TaKps~~e~--~~ipHhlid~~~p~e~~sv~~f~~~a~~~i~~i~~~~kiPIlVGGT 105 (340)
T 3d3q_A 51 TAKVTTEEM--EGIPHYMIDILPPDASFSAYEFKKRAEKYIKDITRRGKVPIIAGGT 105 (340)
T ss_dssp TTCCCTTTT--TTCCEESSSCBCTTSCCCHHHHHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred ECCCCHHHH--HCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCC
T ss_conf 699999999--2799766613778777039887779999999999759971998170
No 116
>1jfx_A 1,4-beta-N-acetylmuramidase M1; beta-alpha-barrel, cellosyl, lysozyme, hydrolase; 1.65A {Streptomyces coelicolor} SCOP: c.1.8.8
Probab=33.08 E-value=24 Score=15.27 Aligned_cols=49 Identities=18% Similarity=0.235 Sum_probs=38.6
Q ss_pred CCCCCCCHHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEE
Q ss_conf 4332120677754073100104200022135799999999999983347479
Q gi|254780197|r 76 PYTGDISANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPI 127 (264)
Q Consensus 76 A~TGeiSa~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pI 127 (264)
.|-|.|....++..|+++|+|==+|-..+. |.....-++.|.++||.+=
T Consensus 12 ~~qg~idw~~~k~~gi~fviiKateG~~~~---D~~~~~n~~~A~~aGl~~G 60 (217)
T 1jfx_A 12 HWQGSINWSSVKSAGMSFAYIKATEGTNYK---DDRFSANYTNAYNAGIIRG 60 (217)
T ss_dssp GGGCSCCHHHHHHTTCCEEEEEEEETTTEE---CTTHHHHHHHHHHTTCEEE
T ss_pred CCCCCCCHHHHHHCCCEEEEEEEECCCCCC---CHHHHHHHHHHHHCCCEEE
T ss_conf 888987999998779909999996598849---8689999999998599299
No 117
>1yy3_A S-adenosylmethionine:tRNA ribosyltransferase- isomerase; beta-barrel, QUEA, quein queuosine, tRNA- modification; 2.88A {Bacillus subtilis}
Probab=32.86 E-value=16 Score=16.38 Aligned_cols=65 Identities=23% Similarity=0.283 Sum_probs=36.4
Q ss_pred HHHHCCCCCCCCC---CC--CCCHHHHH---HHCCCCEE----EC-----------------CHHCCCCCCCCHHHHHHH
Q ss_conf 2220122233343---32--12067775---40731001----04-----------------200022135799999999
Q gi|254780197|r 65 GAQDCHIAEYGPY---TG--DISANMLA---DCGANFVI----LG-----------------HSERRIGHREDSYVVQSK 115 (264)
Q Consensus 65 gAQnv~~~~~GA~---TG--eiSa~mL~---d~g~~~vi----iG-----------------HSERR~~~~E~d~~I~~K 115 (264)
-=|.++....||- |. +.+.++|. +-|++.+- || |||+=.. .+....+
T Consensus 167 rYQTVyA~~~GSvAAPTAGLHFt~~ll~~L~~kGv~i~~iTLHVG~GTF~Pv~~e~i~~h~mH~E~~~i----~~~t~~~ 242 (346)
T 1yy3_A 167 RYQTVYSKEIGSAAAPTAGLHFTEEILQQLKDKGVQIEFITLHVGLGTFRPVSADEVEEHNMHAEFYQM----SEETAAA 242 (346)
T ss_dssp ------------CCCCSSTTCCCHHHHHHHHHHTEEEEECEEESGGGGGC-----------CCCEEEEE----CHHHHHH
T ss_pred HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEE----CHHHHHH
T ss_conf 999997216897028878887899999999986985999999614776577665544457887668982----4999999
Q ss_pred HHHHHHCCCCEEEECCCCC
Q ss_conf 9999833474799816552
Q gi|254780197|r 116 VKSACNAGLYPIVCIGETD 134 (264)
Q Consensus 116 ~~~al~~~l~pIlCiGE~~ 134 (264)
++.+.++| ..|+|||-|-
T Consensus 243 I~~ak~~g-~rIiAVGTT~ 260 (346)
T 1yy3_A 243 LNKVRENG-GRIISVGTTS 260 (346)
T ss_dssp HHHHHHTT-CCEEEECTTT
T ss_pred HHHHHHCC-CEEEEEECCH
T ss_conf 99999759-9099994516
No 118
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=32.22 E-value=25 Score=15.18 Aligned_cols=36 Identities=19% Similarity=0.158 Sum_probs=20.9
Q ss_pred CCCEEEECCCCCHHHHHHHH-------CCCCCCEEEECHHHCC
Q ss_conf 64308862778987899996-------6898968897434358
Q gi|254780197|r 204 QKMRILYGGSVDVANAEDFS-------LIENIDGLLVGGASLQ 239 (264)
Q Consensus 204 ~~i~ilYGGSV~~~N~~~l~-------~~~~iDG~LVG~ASl~ 239 (264)
..+||+==|.++++|+.+++ .....||+-|-+|=+.
T Consensus 172 ~~iPv~AIGGI~~~n~~~vl~~~~~~~~~~GadgiAvisaI~~ 214 (540)
T 3nl6_A 172 HWCRTVGIGGLHPDNIERVLYQCVSSNGKRSLDGICVVSDIIA 214 (540)
T ss_dssp TTCEEEEESSCCTTTHHHHHHHCBCTTSSCBCSCEEESHHHHT
T ss_pred CCCCEEEECCCCHHHHHHHHHHHHCHHHHCCCCEEEEEEHHCC
T ss_conf 7899799889788889999974200024308847999821304
No 119
>1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5
Probab=32.19 E-value=25 Score=15.18 Aligned_cols=19 Identities=11% Similarity=-0.057 Sum_probs=7.2
Q ss_pred CCEEEEE-CCH--HHHHHHHHH
Q ss_conf 7119996-896--559999997
Q gi|254780197|r 38 CIDVAIC-PPA--TLIYESSRL 56 (264)
Q Consensus 38 ~veivi~-Pp~--~~L~~~~~~ 56 (264)
+.++.|+ -|+ .|...+...
T Consensus 141 ~~~~yi~GESYgG~yvP~la~~ 162 (452)
T 1ivy_A 141 NNKLFLTGESYAGIYIPTLAVL 162 (452)
T ss_dssp TSCEEEEEETTHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCCCHHHHHH
T ss_conf 8853785046654135899999
No 120
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, cytoplasm, schiff base, carbohydrate metabolism; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 1hl2_A 1fdy_A 1fdz_A 1nal_1
Probab=32.13 E-value=25 Score=15.17 Aligned_cols=45 Identities=13% Similarity=0.087 Sum_probs=29.3
Q ss_pred CCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCHHHHHHHHHHHHH
Q ss_conf 6430886277898789999668989688974343588999999999999
Q gi|254780197|r 204 QKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQHELFLKIVEIVER 252 (264)
Q Consensus 204 ~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~~~F~~Ii~~~~~ 252 (264)
++..|++|+. . ..-+.+. -+.+|++.|.++.-|+.+.++++.+.+
T Consensus 189 ~~~~v~~g~~-~--~~~~~~~-~G~~G~~s~~~n~~p~~~~~i~~~~~~ 233 (303)
T 2wkj_A 189 PDLVLYNGYD-N--IFASGLL-AGADGGIGSTYNIMGWRYQGIVKALKE 233 (303)
T ss_dssp TTCEEEECCG-G--GHHHHHH-HTCCEEEETTHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEECCH-H--HHHHHCC-CCCCCCCCCCHHCCCHHHHHHHHHHHC
T ss_conf 9958983747-8--8765314-699863023100262467899999986
No 121
>1wdi_A Hypothetical protein TT0907; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: CIT; 2.10A {Thermus thermophilus} SCOP: e.53.1.1
Probab=31.72 E-value=16 Score=16.39 Aligned_cols=64 Identities=23% Similarity=0.286 Sum_probs=40.1
Q ss_pred HHHCCCCCCCCC---CC--CCCHHHHHH---HCCCCEE----EC----------------CHHCCCCCCCCHHHHHHHHH
Q ss_conf 220122233343---32--120677754---0731001----04----------------20002213579999999999
Q gi|254780197|r 66 AQDCHIAEYGPY---TG--DISANMLAD---CGANFVI----LG----------------HSERRIGHREDSYVVQSKVK 117 (264)
Q Consensus 66 AQnv~~~~~GA~---TG--eiSa~mL~d---~g~~~vi----iG----------------HSERR~~~~E~d~~I~~K~~ 117 (264)
=|.|+....||- |- +.|.++|.. -|++.+- || |||+=.. .+....+++
T Consensus 169 YQTVyAk~~GSVAAPTAGLHFt~~ll~~l~~kgi~~~~iTLHVG~GTF~PV~~~i~~H~mH~E~~~I----~~~t~~~I~ 244 (345)
T 1wdi_A 169 YQTVYARRPGSVAAPTAGLHFTPELLERLREMGVELRFLTLHVGPGTFRPVKGDPEKHEMHAEPYAI----PEEVAEAVN 244 (345)
T ss_dssp ------------CCCCGGGGCCHHHHHHHHHTTCEEEEEEEEESGGGCCC---------CCCEEEEE----CHHHHHHHH
T ss_pred HHHHHCCCCCCEECCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEE----CHHHHHHHH
T ss_conf 3246406898550676878779999999998698089999963677504544543467876538996----699999999
Q ss_pred HHHHCCCCEEEECCCCC
Q ss_conf 99833474799816552
Q gi|254780197|r 118 SACNAGLYPIVCIGETD 134 (264)
Q Consensus 118 ~al~~~l~pIlCiGE~~ 134 (264)
.+.+.| ..|+|||-|-
T Consensus 245 ~ak~~g-~rIiAVGTT~ 260 (345)
T 1wdi_A 245 RAKAEG-RRVVAVGTTV 260 (345)
T ss_dssp HHHHTT-CCEEEESHHH
T ss_pred HHHHCC-CCEEEEECCH
T ss_conf 999749-9299992408
No 122
>2nu8_B SCS-beta, succinyl-COA synthetase beta chain; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, rossmann fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.23.4.1 d.142.1.4 PDB: 1scu_B* 2nu6_B* 1jkj_B* 2nu7_B* 2nu9_B* 2nua_B* 2scu_B* 1jll_B* 1cqj_B* 1cqi_B*
Probab=31.52 E-value=26 Score=15.11 Aligned_cols=46 Identities=20% Similarity=0.363 Sum_probs=32.8
Q ss_pred EEECCCCCHHHHHH----HHCCCCCCEEEEC--HHHCCHHHHHH-HHHHHHHH
Q ss_conf 88627789878999----9668989688974--34358899999-99999999
Q gi|254780197|r 208 ILYGGSVDVANAED----FSLIENIDGLLVG--GASLQHELFLK-IVEIVERV 253 (264)
Q Consensus 208 ilYGGSV~~~N~~~----l~~~~~iDG~LVG--~ASl~~~~F~~-Ii~~~~~~ 253 (264)
.-|||+.+.+...+ +++.|++.++||. |.=...+..++ |+++++..
T Consensus 287 ld~gG~a~~e~v~~a~kiil~d~~vk~iliNIfGGI~rcd~vA~GIi~A~~~~ 339 (388)
T 2nu8_B 287 LDVGGGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEV 339 (388)
T ss_dssp EECCSCCCHHHHHHHHHHHHTSTTCCEEEEEEESCSSCHHHHHHHHHHHHHHH
T ss_pred EEECCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHC
T ss_conf 87369997899999999986599965899996076455899999999999970
No 123
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, , PSI-2, protein structure initiative; 1.80A {Bacillus clausii ksm-k16}
Probab=30.89 E-value=26 Score=15.04 Aligned_cols=45 Identities=16% Similarity=0.215 Sum_probs=29.3
Q ss_pred CCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCHHHHHHHHHHHHH
Q ss_conf 430886277898789999668989688974343588999999999999
Q gi|254780197|r 205 KMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQHELFLKIVEIVER 252 (264)
Q Consensus 205 ~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~~~F~~Ii~~~~~ 252 (264)
.+.++.|+.-.. ...+ -.-..+|+.-|.+.+-|+.+.+|.+.+.+
T Consensus 188 ~~~~~~G~~~~~--~~~~-~~~G~~G~is~~~n~~P~~~~~l~~~~~~ 232 (316)
T 3e96_A 188 QIAWICGTAEKW--APFF-WHAGAKGFTSGLVNLLPQKAVEMLEALRN 232 (316)
T ss_dssp CCEEEETTCTTT--HHHH-HHHTCCEEEESGGGTCHHHHHHHHHHHHT
T ss_pred CCCCCCCCCCCC--CCHH-CCCCCCEEECCCCCCCHHHHHHHHHHHHC
T ss_conf 643025883200--1000-26799767304100769999999999888
No 124
>3eph_A TRNA isopentenyltransferase; transferase, alternative initiation, ATP-binding, cytoplasm, mitochondrion, nucleotide-binding, nucleus; 2.95A {Saccharomyces cerevisiae} PDB: 3epj_A 3epk_A* 3epl_A*
Probab=30.53 E-value=27 Score=15.01 Aligned_cols=30 Identities=13% Similarity=0.101 Sum_probs=14.9
Q ss_pred HHHHHHHHCCCCCCCCEEEEECCHHHHHHHH
Q ss_conf 9999995222345771199968965599999
Q gi|254780197|r 24 RIQKIVEGIRRNSCCIDVAICPPATLIYESS 54 (264)
Q Consensus 24 ~~~~~~~~~~~~~~~veivi~Pp~~~L~~~~ 54 (264)
.....+..+.. ...+-|++--+..|+..+.
T Consensus 79 ~a~~~i~~i~~-rgk~PIiVGGT~~Yi~aLl 108 (409)
T 3eph_A 79 ECMNAIEDIHR-RGKIPIVVGGTHYYLQTLF 108 (409)
T ss_dssp HHHHHHHHHHT-TTCEEEEECSCGGGGGGGG
T ss_pred HHHHHHHHHHH-CCCCEEEECCCCHHHHHHH
T ss_conf 99999999986-2896599888217999997
No 125
>3foz_A TRNA delta(2)-isopentenylpyrophosphate transferase; nucleoside modification, isopentenyl-tRNA transferase, MIAA, transferase/RNA complex; 2.50A {Escherichia coli k-12} PDB: 2zxu_A* 2zm5_A
Probab=29.70 E-value=27 Score=14.92 Aligned_cols=56 Identities=16% Similarity=0.099 Sum_probs=38.5
Q ss_pred CCCCCCHHHHHHHCCCCEEECCHHCCCCCCCCH--HHHHHHHHHHHHCCCCEEEECCCCC
Q ss_conf 332120677754073100104200022135799--9999999999833474799816552
Q gi|254780197|r 77 YTGDISANMLADCGANFVILGHSERRIGHREDS--YVVQSKVKSACNAGLYPIVCIGETD 134 (264)
Q Consensus 77 ~TGeiSa~mL~d~g~~~viiGHSERR~~~~E~d--~~I~~K~~~al~~~l~pIlCiGE~~ 134 (264)
-|+-.|.+.+. ++.+-++|+-+--..|.-.+ ....+.+....+.|-.||+|=|-.+
T Consensus 53 gTaKp~~~e~~--~i~Hhlid~~~p~e~~sv~~f~~~a~~~i~~i~~~~k~pIlVGGTgl 110 (316)
T 3foz_A 53 GTAKPNAEELL--AAPHRLLDIRDPSQAYSAADFRRDALAEMADITAAGRIPLLVGGTML 110 (316)
T ss_dssp TTTCCCHHHHH--HSCEETSSCBCTTSCCCHHHHHHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred EECCCCHHHHH--CCCEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCEEECCCHH
T ss_conf 77899999992--79977745668887552999999999899999965997089735178
No 126
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=29.41 E-value=28 Score=14.89 Aligned_cols=50 Identities=14% Similarity=0.015 Sum_probs=36.8
Q ss_pred CHHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECC
Q ss_conf 06777540731001042000221357999999999999833474799816
Q gi|254780197|r 82 SANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIG 131 (264)
Q Consensus 82 Sa~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiG 131 (264)
..+.+++.|+..|=|-++-...+-...-+.+.+-+..|.++||.+|+-+-
T Consensus 37 ~~~~~k~~G~N~vRl~~~~~~~~~~~~~~~ld~~v~~a~~~Gi~Vildlh 86 (302)
T 1bqc_A 37 AFADIKSHGANTVRVVLSNGVRWSKNGPSDVANVISLCKQNRLICMLEVH 86 (302)
T ss_dssp HHHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHHTTCEEEEEEG
T ss_pred HHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEC
T ss_conf 99999976998899703165557877099999999999987998999843
No 127
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A
Probab=29.24 E-value=28 Score=14.87 Aligned_cols=19 Identities=32% Similarity=0.275 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHCCCCEEE
Q ss_conf 9999999999833474799
Q gi|254780197|r 110 YVVQSKVKSACNAGLYPIV 128 (264)
Q Consensus 110 ~~I~~K~~~al~~~l~pIl 128 (264)
+.+.+=+..|.++||.+|+
T Consensus 95 ~~ld~~v~~a~~~Gi~Vil 113 (358)
T 1ece_A 95 QVMDKIVAYAGQIGLRIIL 113 (358)
T ss_dssp HHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHCCCEEEE
T ss_conf 9999999999988998999
No 128
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain, alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=28.72 E-value=29 Score=14.81 Aligned_cols=48 Identities=17% Similarity=0.300 Sum_probs=37.4
Q ss_pred CCEEEECCCC-CHHHHHHHHCCCCCCEEEECHHHC-CHHHHHHHHHHHHHH
Q ss_conf 4308862778-987899996689896889743435-889999999999999
Q gi|254780197|r 205 KMRILYGGSV-DVANAEDFSLIENIDGLLVGGASL-QHELFLKIVEIVERV 253 (264)
Q Consensus 205 ~i~ilYGGSV-~~~N~~~l~~~~~iDG~LVG~ASl-~~~~F~~Ii~~~~~~ 253 (264)
+++|+-.|.| +++.+.+.+. ...|++.||++.+ +|.-|.+|++-..+.
T Consensus 241 ~ipIIg~GGI~s~~D~~~~l~-~GAd~V~ig~~~~~~P~~~~~i~~~L~~~ 290 (311)
T 1ep3_A 241 DIPIIGMGGVANAQDVLEMYM-AGASAVAVGTANFADPFVCPKIIDKLPEL 290 (311)
T ss_dssp SSCEEECSSCCSHHHHHHHHH-HTCSEEEECTHHHHCTTHHHHHHHHHHHH
T ss_pred CCCEEEECCCCCHHHHHHHHH-CCCCEEEECHHHHCCCHHHHHHHHHHHHH
T ss_conf 677797689599999999998-19999996288862987999999999999
No 129
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum 3D7} SCOP: c.1.2.2
Probab=28.44 E-value=29 Score=14.78 Aligned_cols=124 Identities=15% Similarity=0.183 Sum_probs=70.3
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCCCCCCCEEEECHHHHHCCCCCCCCHHHH
Q ss_conf 57999999999999833474799816552033349800011100222100000013411320513530455764311245
Q gi|254780197|r 106 REDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEFKSSVPVIAYEPIWAIGTGRVPAVVDLE 185 (264)
Q Consensus 106 ~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~~~~~~iIAYEPvWAIGtG~~a~~~~i~ 185 (264)
.|+.......++.+.+.|+.+=+-+-= ....+.+...+.. ..-.-.++.+=+|-. .|+.-.+.
T Consensus 97 ~~~~~~~~~~i~~i~~~g~~~Glal~p-------~t~~~~~~~~l~~----~~iD~vl~m~V~PGf---~GQ~f~~~--- 159 (227)
T 1tqx_A 97 NEDTERCIQLAKEIRDNNLWCGISIKP-------KTDVQKLVPILDT----NLINTVLVMTVEPGF---GGQSFMHD--- 159 (227)
T ss_dssp TTCHHHHHHHHHHHHTTTCEEEEEECT-------TSCGGGGHHHHTT----TCCSEEEEESSCTTC---SSCCCCGG---
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEECCC-------CCCHHHHHHHHHC----CCCCEEEEEEECCCC---CCCCCCCH---
T ss_conf 452130999999998649747331489-------9998998755400----432579999841367---87434612---
Q ss_pred HHHHHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCHHHHHHHHHHHHHH
Q ss_conf 54467999999633224164308862778987899996689896889743435889999999999999
Q gi|254780197|r 186 KIHSFVRRILLDRFPEEGQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQHELFLKIVEIVERV 253 (264)
Q Consensus 186 ~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~~~F~~Ii~~~~~~ 253 (264)
+...||+. ++++ .+++|-=-|+||.+|+..+.+ .++|.+-+|+|=.+.++..+.++..++.
T Consensus 160 -~l~kI~~l-r~~~----~~~~I~VDGGIn~e~i~~l~~-~Gad~~V~GSaif~~~d~~~~i~~lr~~ 220 (227)
T 1tqx_A 160 -MMGKVSFL-RKKY----KNLNIQVDGGLNIETTEISAS-HGANIIVAGTSIFNAEDPKYVIDTMRVS 220 (227)
T ss_dssp -GHHHHHHH-HHHC----TTCEEEEESSCCHHHHHHHHH-HTCCEEEESHHHHTCSSHHHHHHHHHHH
T ss_pred -HHHHHHHH-HHHC----CCCEEEEECCCCHHHHHHHHH-CCCCEEEECHHHHCCCCHHHHHHHHHHH
T ss_conf -67899999-9837----997699985688899999998-3999999656987899999999999999
No 130
>3exa_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacillus halodurans} PDB: 2qgn_A
Probab=28.39 E-value=29 Score=14.78 Aligned_cols=54 Identities=13% Similarity=0.180 Sum_probs=30.6
Q ss_pred CCCCCHHHHHHHCCCCEEECCHHCCCCCCCC--HHHHHHHHHHHHHCCCCEEEECCCC
Q ss_conf 3212067775407310010420002213579--9999999999983347479981655
Q gi|254780197|r 78 TGDISANMLADCGANFVILGHSERRIGHRED--SYVVQSKVKSACNAGLYPIVCIGET 133 (264)
Q Consensus 78 TGeiSa~mL~d~g~~~viiGHSERR~~~~E~--d~~I~~K~~~al~~~l~pIlCiGE~ 133 (264)
|+-.|.+.+ -++.+-++|+-+-...|.-. -....+.+..+.+.|-.||+|=|-.
T Consensus 47 TaKps~~e~--~~ipHhlid~~~p~e~~sv~~f~~~a~~~i~~i~~r~k~PIlVGGTg 102 (322)
T 3exa_A 47 TAKITAEEM--DGVPHHLIDIKDPSESFSVADFQDLATPLITEIHERGRLPFLVGGTG 102 (322)
T ss_dssp TTCCCHHHH--TTCCEESSSCBCTTSCCCHHHHHHHHHHHHHHHHHTTCEEEEESCCH
T ss_pred ECCCCHHHH--HCCCEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCEEEEECCH
T ss_conf 789999999--07997741573788742299878789999999997699809994838
No 131
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, structural genomics, joint center for structural genomics, JCSG; 1.91A {Haemophilus somnus 129PT}
Probab=27.92 E-value=29 Score=14.72 Aligned_cols=70 Identities=21% Similarity=0.248 Sum_probs=42.2
Q ss_pred CEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHHHCC-CCCCEEEECHHHCCH
Q ss_conf 113205135304557643112455446799999963322416430886277898789999668-989688974343588
Q gi|254780197|r 163 PVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVDVANAEDFSLI-ENIDGLLVGGASLQH 240 (264)
Q Consensus 163 ~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~~N~~~l~~~-~~iDG~LVG~ASl~~ 240 (264)
++..=||- ..|+...+ .+...|++. .++......++.|-=-|+||.+|++.+..- .++|-+-.|+|=...
T Consensus 153 lvMsV~PG---~~Gq~f~~----~~l~ki~~l-~~~~~~~~~~~~I~VDGGIn~~~i~~l~~aga~vd~~V~GS~iF~~ 223 (237)
T 3cu2_A 153 QLLTLDPR---NGTKYPSE----LILDRVIQV-EKRLGNRRVEKLINIDGSMTLELAKYFKQGTHQIDWLVSGSALFSG 223 (237)
T ss_dssp EEESEETT---TTEECCHH----HHHHHHHHH-HHHHGGGGGGCEEEEESSCCHHHHHHHHHSSSCCCCEEECGGGGSS
T ss_pred EEEEECCC---CCCCCCCC----CHHHHHHHH-HHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCEEEECCCEECC
T ss_conf 99987789---88767882----188999999-9999707998069997994889999999734899989968430496
No 132
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=27.91 E-value=30 Score=14.72 Aligned_cols=133 Identities=13% Similarity=0.071 Sum_probs=60.3
Q ss_pred HHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCCCCCC
Q ss_conf 67775407310010420002213579999999999998334747998165520333498000111002221000000134
Q gi|254780197|r 83 ANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEFKSSV 162 (264)
Q Consensus 83 a~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~~~~~ 162 (264)
++..++.|++.+++--. .++.-+++.+-.-++...++-=.||+-.--+ .+ .|.... .+++.. + .+..+
T Consensus 104 a~~a~~~Gad~i~v~pP---~~~~~~~~~i~~~~~~v~~a~~~pi~~y~~p--~~-~g~~l~--~~~~~~-l---~~~~~ 171 (304)
T 3cpr_A 104 AEAAASAGADGLLVVTP---YYSKPSQEGLLAHFGAIAAATEVPICLYDIP--GR-SGIPIE--SDTMRR-L---SELPT 171 (304)
T ss_dssp HHHHHHTTCSEEEEECC---CSSCCCHHHHHHHHHHHHHHCCSCEEEEECH--HH-HSSCCC--HHHHHH-H---TTSTT
T ss_pred HHHHHHCCCCEEEECCC---CCCCCCHHHHHHHHHHHHHHCCCCEEEEECC--CC-CCCCCC--HHHHHH-H---HCCCC
T ss_conf 99999739999998898---7789899999999999997359976776355--43-488888--999999-8---53899
Q ss_pred CEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCHHH
Q ss_conf 11320513530455764311245544679999996332241643088627789878999966898968897434358899
Q gi|254780197|r 163 PVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQHEL 242 (264)
Q Consensus 163 ~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~~~ 242 (264)
++-.-+ ++ .+..++...++. ....+..|+.- ..-+.+ .-+.+|++-|-+..-|+.
T Consensus 172 i~~iK~----------~~-~~~~~~~~~~~~----------~~~~~~~~~~~---~~~~~~-~~G~~G~i~~~~n~~P~~ 226 (304)
T 3cpr_A 172 ILAVXD----------AK-GDLVAATSLIKE----------TGLAWYSGDDP---LNLVWL-ALGGSGFISVIGHAAPTA 226 (304)
T ss_dssp EEEEEE----------CS-CCHHHHHHHHHH----------HCCEEEECSGG---GHHHHH-HTTCCEEEESGGGTCHHH
T ss_pred EEEEEC----------CC-CCHHHHHHHHHH----------CCEEEECCCCH---HHHHHH-HCCCCCCCCCCCCCCCHH
T ss_conf 678515----------87-679999999752----------34156248835---566898-749984445535667276
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999999
Q gi|254780197|r 243 FLKIVEIVER 252 (264)
Q Consensus 243 F~~Ii~~~~~ 252 (264)
+.++.+.+.+
T Consensus 227 ~~~l~~~~~~ 236 (304)
T 3cpr_A 227 LRELYTSFEE 236 (304)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHC
T ss_conf 9999999886
No 133
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: MSE; 1.80A {Campylobacter jejuni} PDB: 3ler_A*
Probab=27.85 E-value=30 Score=14.72 Aligned_cols=42 Identities=10% Similarity=0.144 Sum_probs=26.2
Q ss_pred EEECCCCCHHHHHHHHCCCCCCEEEECHHHCCHHHHHHHHHHHHH
Q ss_conf 886277898789999668989688974343588999999999999
Q gi|254780197|r 208 ILYGGSVDVANAEDFSLIENIDGLLVGGASLQHELFLKIVEIVER 252 (264)
Q Consensus 208 ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~~~F~~Ii~~~~~ 252 (264)
.+++|+-.. .-..+ .-..+|+..|-+..-|+.+.+|++.+.+
T Consensus 189 ~~~~~~~~~--~~~~~-~~G~~G~~~~~~~~~p~~~~~l~~~~~~ 230 (301)
T 3m5v_A 189 MLISGEDAI--NYPIL-SNGGKGVISVTSNLLPDMISALTHFALD 230 (301)
T ss_dssp EEEECCGGG--HHHHH-HTTCCEEEESGGGTCHHHHHHHHHHHHT
T ss_pred EECCCCHHH--HHHHH-CCCCEEEEECHHCCCCHHHHHHHHHHHC
T ss_conf 120584154--54676-2898378753200361789999999861
No 134
>3nrd_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.06A {Sinorhizobium meliloti}
Probab=27.78 E-value=19 Score=15.96 Aligned_cols=28 Identities=14% Similarity=0.303 Sum_probs=23.2
Q ss_pred CHHHHHCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 5135304557643112455446799999
Q gi|254780197|r 168 EPIWAIGTGRVPAVVDLEKIHSFVRRIL 195 (264)
Q Consensus 168 EPvWAIGtG~~a~~~~i~~~~~~Ir~~l 195 (264)
.|+|..+.....+.++.+++.+.||+.|
T Consensus 108 ~~vw~~~~~~~~~~~e~~~l~~kI~~~L 135 (135)
T 3nrd_A 108 GPVWGFGKAEPWPEEEHRTFAARIMENL 135 (135)
T ss_dssp SCSTTCSCCCCCCHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHC
T ss_conf 7612778887799999999999999609
No 135
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A*
Probab=27.45 E-value=30 Score=14.67 Aligned_cols=26 Identities=19% Similarity=0.376 Sum_probs=17.5
Q ss_pred CCCCEEEECHHHCCHHHHHHHHHHHH
Q ss_conf 98968897434358899999999999
Q gi|254780197|r 226 ENIDGLLVGGASLQHELFLKIVEIVE 251 (264)
Q Consensus 226 ~~iDG~LVG~ASl~~~~F~~Ii~~~~ 251 (264)
-+.||+.-|.+.+-|+.+.+|.+.+.
T Consensus 189 ~Ga~G~is~~~n~~P~~~~~l~~~~~ 214 (293)
T 1w3i_A 189 TGLDGNVAAGSNYLPEVTVTIKKLAM 214 (293)
T ss_dssp TTCCEEECGGGGTCHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 68875124176635999999999887
No 136
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase, lysine biosynthesis; 1.50A {Hahella chejuensis}
Probab=26.27 E-value=32 Score=14.54 Aligned_cols=46 Identities=11% Similarity=0.143 Sum_probs=30.5
Q ss_pred CCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCHHHHHHHHHHHHHH
Q ss_conf 64308862778987899996689896889743435889999999999999
Q gi|254780197|r 204 QKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQHELFLKIVEIVERV 253 (264)
Q Consensus 204 ~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~~~F~~Ii~~~~~~ 253 (264)
.+..+ ++|.- ...-+.+. -+.+|+.-|.+...|+.+.+|.+.+.+=
T Consensus 178 ~~~~~-~~G~~--~~~~~~l~-~G~~G~~~~~~~~~P~~~~~i~~~~~~g 223 (297)
T 2rfg_A 178 KPFSF-LSGDD--MTAIAYNA-SGGQGCISVSANIAPALYGQMQTATLQG 223 (297)
T ss_dssp SCCEE-EESCG--GGHHHHHH-TTCCEEEESGGGTCHHHHHHHHHHHHHT
T ss_pred CCCEE-EECCH--HHHHHHHH-CCCEEEECCEECCCCHHHHHHHHHHHCC
T ss_conf 88559-83661--76799996-6976786361013730699999999859
No 137
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus HB8}
Probab=25.98 E-value=32 Score=14.51 Aligned_cols=45 Identities=16% Similarity=0.195 Sum_probs=33.3
Q ss_pred CCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHH
Q ss_conf 311245544679999996332241643088627789878999966898968897434
Q gi|254780197|r 180 AVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVDVANAEDFSLIENIDGLLVGGA 236 (264)
Q Consensus 180 ~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~A 236 (264)
+|+++.++.+.++ +++++---|.+|++|+.++.. .+||.+=+|..
T Consensus 226 ~~e~i~~~v~~~~-----------~~v~ieaSGGI~~~ni~~ya~-~GVD~Is~g~l 270 (286)
T 1x1o_A 226 PLEALREAVRRVG-----------GRVPLEASGNMTLERAKAAAE-AGVDYVSVGAL 270 (286)
T ss_dssp CHHHHHHHHHHHT-----------TSSCEEEESSCCHHHHHHHHH-HTCSEEECTHH
T ss_pred CHHHHHHHHHHHC-----------CCEEEEEECCCCHHHHHHHHH-CCCCEEECCHH
T ss_conf 9999999999877-----------966999979999999999997-69999983977
No 138
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, X-RAY diffraction, riken structural genomics/proteomics initiative; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=25.60 E-value=32 Score=14.46 Aligned_cols=37 Identities=11% Similarity=0.121 Sum_probs=26.2
Q ss_pred CCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCHHH
Q ss_conf 643088627789878999966898968897434358899
Q gi|254780197|r 204 QKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQHEL 242 (264)
Q Consensus 204 ~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~~~ 242 (264)
+.+.|-=+|==+++.+..+ . ..+||+|||.+=+..++
T Consensus 208 ~~~~IsESGI~~~~dv~~l-~-~G~davLIGesLm~~~d 244 (254)
T 1vc4_A 208 GGVLVAESGYSRKEELKAL-E-GLFDAVLIGTSLMRAPD 244 (254)
T ss_dssp CSEEEEESCCCSHHHHHTT-T-TTCSEEEECHHHHTSSC
T ss_pred CCEEEECCCCCCHHHHHHH-H-CCCCEEEECHHHCCCCC
T ss_conf 9879975799999999999-8-59999998835317999
No 139
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=25.39 E-value=33 Score=14.44 Aligned_cols=26 Identities=12% Similarity=0.042 Sum_probs=18.7
Q ss_pred CCCCEEEECHHHCCHHHHHHHHHHHH
Q ss_conf 98968897434358899999999999
Q gi|254780197|r 226 ENIDGLLVGGASLQHELFLKIVEIVE 251 (264)
Q Consensus 226 ~~iDG~LVG~ASl~~~~F~~Ii~~~~ 251 (264)
-+.+|+.-|-+..-|+.+.+|.+.+.
T Consensus 197 ~G~~G~i~~~~n~~P~~~~~~~~~~~ 222 (292)
T 2vc6_A 197 HGGHGCISVTANVAPALCADFQQACL 222 (292)
T ss_dssp TTCCEEEESGGGTCHHHHHHHHHHHH
T ss_pred CCCEEEEEHHHHHHHHHHHHHHHHHH
T ss_conf 69849995377688999999999998
No 140
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima}
Probab=25.39 E-value=33 Score=14.44 Aligned_cols=54 Identities=15% Similarity=0.049 Sum_probs=33.2
Q ss_pred HHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEE-CCCCCHHHHHHHHCCCCCCEEEECHHHC
Q ss_conf 5304557643112455446799999963322416430886-2778987899996689896889743435
Q gi|254780197|r 171 WAIGTGRVPAVVDLEKIHSFVRRILLDRFPEEGQKMRILY-GGSVDVANAEDFSLIENIDGLLVGGASL 238 (264)
Q Consensus 171 WAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilY-GGSV~~~N~~~l~~~~~iDG~LVG~ASl 238 (264)
=.-|||+-...+.+.++.. ...+|++. ||..+++...+... .++||+++|++-.
T Consensus 153 ~~dGt~kg~d~~~i~~~s~-------------~~~~P~i~~gG~~~~e~l~e~~~-~g~~a~~~gs~~~ 207 (237)
T 3cwo_X 153 DRDGTKSGYDTEMIRFVRP-------------LTTLPIIASGGAGKMEHFLEAFL-AGADAALAASVFH 207 (237)
T ss_dssp TTTTCCSCCCHHHHHHHGG-------------GCCSCEEEESCCCSHHHHHHHHH-HTCSEEEESHHHH
T ss_pred CCCCCCCCCCHHHHHHHHH-------------HCCCCEEEECCCCCHHHHHHHHH-CCCCEEEEHHHHH
T ss_conf 5987678543798887765-------------11021476566688999999985-7981564401564
No 141
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=25.14 E-value=33 Score=14.41 Aligned_cols=166 Identities=14% Similarity=0.232 Sum_probs=88.0
Q ss_pred CCCCEEEEECCHHHHHHHHHHHCC--CCCCHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCEEECCHHCCCCCCCCHHHHH
Q ss_conf 577119996896559999997325--763102220122233343321206777540731001042000221357999999
Q gi|254780197|r 36 SCCIDVAICPPATLIYESSRLCKT--SSVIIGAQDCHIAEYGPYTGDISANMLADCGANFVILGHSERRIGHREDSYVVQ 113 (264)
Q Consensus 36 ~~~veivi~Pp~~~L~~~~~~~~~--s~I~igAQnv~~~~~GA~TGeiSa~mL~d~g~~~viiGHSERR~~~~E~d~~I~ 113 (264)
...+||-+--|. .+..+..+.+. ..+.+|+=.+-.. -.+++..+.|++|.+- -+-+.++++
T Consensus 33 i~~iEitl~tp~-a~~~i~~l~~~~~~~~~vGaGTV~~~--------~~~~~a~~aGA~Fivs--------P~~~~~v~~ 95 (212)
T 2v82_A 33 FDAVEIPLNSPQ-WEQSIPAIVDAYGDKALIGAGTVLKP--------EQVDALARMGCQLIVT--------PNIHSEVIR 95 (212)
T ss_dssp CCEEEEETTSTT-HHHHHHHHHHHHTTTSEEEEECCCSH--------HHHHHHHHTTCCEEEC--------SSCCHHHHH
T ss_pred CCEEEEECCCCC-HHHHHHHHHHHCCCCCEEEEECCCCH--------HHHHHHHHCCCCEEEC--------CCCCHHHHH
T ss_conf 998999579934-99999999996687507853022247--------8899998548978989--------989989999
Q ss_pred HHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCCCCCCCEEEECHHHHHCCCCCCCCHHHHHHHHHHHH
Q ss_conf 99999983347479981655203334980001110022210000001341132051353045576431124554467999
Q gi|254780197|r 114 SKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEFKSSVPVIAYEPIWAIGTGRVPAVVDLEKIHSFVRR 193 (264)
Q Consensus 114 ~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~~~~~~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~ 193 (264)
.|.+.|+..|-=+--.-|.. ..+ ...--++=+-|.-+.|. .++|.
T Consensus 96 ----~a~~~~i~~iPGv~TpsEi~--------------~A~----~~G~~~vK~FPa~~~G~-------------~~lk~ 140 (212)
T 2v82_A 96 ----RAVGYGMTVCPGCATATEAF--------------TAL----EAGAQALKIFPSSAFGP-------------QYIKA 140 (212)
T ss_dssp ----HHHHTTCEEECEECSHHHHH--------------HHH----HTTCSEEEETTHHHHCH-------------HHHHH
T ss_pred ----HHHHCCCCCCCCCCCHHHHH--------------HHH----HCCCCEEEECCCCCCCH-------------HHHHH
T ss_conf ----99975876338848769999--------------999----82988586325343578-------------89987
Q ss_pred HHHHHCCHHHCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCH----HHHHHHHHHHHHHHHHHH
Q ss_conf 99963322416430886277898789999668989688974343588----999999999999999843
Q gi|254780197|r 194 ILLDRFPEEGQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQH----ELFLKIVEIVERVYVDSC 258 (264)
Q Consensus 194 ~l~~~~~~~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~----~~F~~Ii~~~~~~~~~~~ 258 (264)
...- ++ .+++++==|.|+++|+.++++. ..+++-+|++=.++ +...+=+..+-+.+.++.
T Consensus 141 l~~~-~p---~~i~~iptGGI~~~N~~~yl~a-Ga~~v~iGs~l~~~~~~~~~~~~~~~~~v~~~~ea~ 204 (212)
T 2v82_A 141 LKAV-LP---SDIAVFAVGGVTPENLAQWIDA-GCAGAGLGSDLYRAGQSVERTAQQAAAFVKAYREAV 204 (212)
T ss_dssp HHTT-SC---TTCEEEEESSCCTTTHHHHHHH-TCSEEEECTTTCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHCC-CC---CCCEEEEECCCCHHHHHHHHHC-CCEEEEECHHHCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 5266-87---7877974279998999999985-996999878973899869999999999999999999
No 142
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus HB8} PDB: 2iss_A*
Probab=24.82 E-value=34 Score=14.37 Aligned_cols=44 Identities=25% Similarity=0.317 Sum_probs=34.2
Q ss_pred CCEEEECCCCCHHHHHHHHCCCCCCEEEECHH---HCCHHHHHH-HHHH
Q ss_conf 43088627789878999966898968897434---358899999-9999
Q gi|254780197|r 205 KMRILYGGSVDVANAEDFSLIENIDGLLVGGA---SLQHELFLK-IVEI 249 (264)
Q Consensus 205 ~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~A---Sl~~~~F~~-Ii~~ 249 (264)
-+-+-+||=.+|..+.-++.+ ..||++||+- |-||++.++ |+++
T Consensus 210 VvnFaAGGIATPADAALmMqL-G~dGVFVGSGIFKS~dP~krA~AIV~A 257 (297)
T 2zbt_A 210 VVNFAAGGIATPADAALMMHL-GMDGVFVGSGIFKSGDPRKRARAIVRA 257 (297)
T ss_dssp SCEEBCSSCCSHHHHHHHHHT-TCSEEEECGGGGGSSCHHHHHHHHHHH
T ss_pred EEEECCCCCCCHHHHHHHHHC-CCCEEEECCCCCCCCCHHHHHHHHHHH
T ss_conf 554446786880769999974-998799775513579989999999999
No 143
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=24.80 E-value=34 Score=14.37 Aligned_cols=27 Identities=15% Similarity=0.161 Sum_probs=21.9
Q ss_pred CCCCEEEECHHHCCHHHHHHHHHHHHH
Q ss_conf 989688974343588999999999999
Q gi|254780197|r 226 ENIDGLLVGGASLQHELFLKIVEIVER 252 (264)
Q Consensus 226 ~~iDG~LVG~ASl~~~~F~~Ii~~~~~ 252 (264)
-+.+|+.-|-+..-|+.+.++++.+.+
T Consensus 195 ~G~~G~~~~~~~~~P~~~~~~~~~~~~ 221 (289)
T 2yxg_A 195 LGGKGVISVVANIVPKEFVEMVNYALE 221 (289)
T ss_dssp TTCCEEEESGGGTCHHHHHHHHHHHHH
T ss_pred CCCCEEECCCCCCCHHHHHHHHHHHHC
T ss_conf 799789725113588999999999988
No 144
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=24.76 E-value=34 Score=14.36 Aligned_cols=43 Identities=5% Similarity=-0.025 Sum_probs=22.5
Q ss_pred EECCCCCHHHHHHHHCCCCCCEEEECHHHCCHHHHHHHHHHHHHH
Q ss_conf 862778987899996689896889743435889999999999999
Q gi|254780197|r 209 LYGGSVDVANAEDFSLIENIDGLLVGGASLQHELFLKIVEIVERV 253 (264)
Q Consensus 209 lYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~~~F~~Ii~~~~~~ 253 (264)
+.||....-+..+|... .+.-+..|.+++.+- ...+-+.++.+
T Consensus 211 ~~~~~~p~~s~~eL~~l-Gv~~v~~~~~~~~aa-~~a~~~~~~~l 253 (295)
T 1xg4_A 211 TEFGATPLFTTDELRSA-HVAMALYPLSAFRAM-NRAAEHVYNVL 253 (295)
T ss_dssp CSSSSSCCCCHHHHHHT-TCSEEEESSHHHHHH-HHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHC-CCEEEEECHHHHHHH-HHHHHHHHHHH
T ss_conf 68899876417799867-901999552999999-99999999999
No 145
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655}
Probab=24.65 E-value=34 Score=14.35 Aligned_cols=24 Identities=17% Similarity=0.340 Sum_probs=15.0
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEE
Q ss_conf 1357999999999999833474799
Q gi|254780197|r 104 GHREDSYVVQSKVKSACNAGLYPIV 128 (264)
Q Consensus 104 ~~~E~d~~I~~K~~~al~~~l~pIl 128 (264)
-|+. ...|.+-++...+.|..-|.
T Consensus 93 GyG~-~~~v~rtv~~~~~aGvagi~ 116 (298)
T 3eoo_A 93 GWGG-AFNIARTIRSFIKAGVGAVH 116 (298)
T ss_dssp CSSS-HHHHHHHHHHHHHTTCSEEE
T ss_pred CCCH-HHHHHHHHHHHHHCCCCEEE
T ss_conf 7780-79999999999975996786
No 146
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=24.64 E-value=34 Score=14.35 Aligned_cols=56 Identities=18% Similarity=0.150 Sum_probs=39.1
Q ss_pred CCCCCCCHHHHHHHCCCCEEECCHHCCCCCCCC-----H---HHHHHHHHHHHHCCCCEEEECC
Q ss_conf 433212067775407310010420002213579-----9---9999999999833474799816
Q gi|254780197|r 76 PYTGDISANMLADCGANFVILGHSERRIGHRED-----S---YVVQSKVKSACNAGLYPIVCIG 131 (264)
Q Consensus 76 A~TGeiSa~mL~d~g~~~viiGHSERR~~~~E~-----d---~~I~~K~~~al~~~l~pIlCiG 131 (264)
+.|-+=-.+.+|++|.+.+=+.=+-.|....+. . +.+.+-+..|+++||.|||.+-
T Consensus 44 p~~tkedI~~ik~~GfN~vRipisW~~~~~~~~~~~in~~~l~~~d~vId~a~~~Gi~viLdlH 107 (515)
T 3icg_A 44 PMTTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDNDMYVIINLH 107 (515)
T ss_dssp CCCCHHHHHHHHHHTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEEECC
T ss_pred CCCCHHHHHHHHHCCCCEEEEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECC
T ss_conf 7066999999998799889970128980788888744999999999999999978999999677
No 147
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, JCSG, PSI, protein structure initiative; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1
Probab=24.62 E-value=34 Score=14.35 Aligned_cols=27 Identities=7% Similarity=0.074 Sum_probs=22.4
Q ss_pred CCCCEEEECHHHCCHHHHHHHHHHHHH
Q ss_conf 989688974343588999999999999
Q gi|254780197|r 226 ENIDGLLVGGASLQHELFLKIVEIVER 252 (264)
Q Consensus 226 ~~iDG~LVG~ASl~~~~F~~Ii~~~~~ 252 (264)
-..+|+.-|.+..-|+.+.++++.+.+
T Consensus 212 ~G~~G~i~~~~n~~p~~~~~~~~~~~~ 238 (306)
T 1o5k_A 212 AGGDGVISVVSNVAPKQMVELCAEYFS 238 (306)
T ss_dssp HTCCEEEESGGGTCHHHHHHHHHHHHT
T ss_pred CCCCEEECCCCCCCCHHHHHHHHHHHC
T ss_conf 499705653025574469999999987
No 148
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=24.41 E-value=34 Score=14.32 Aligned_cols=80 Identities=15% Similarity=0.222 Sum_probs=51.9
Q ss_pred CCCEEEECHHHH---------------HCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCE-EEECCCCCHHHHHHHHC
Q ss_conf 341132051353---------------04557643112455446799999963322416430-88627789878999966
Q gi|254780197|r 161 SVPVIAYEPIWA---------------IGTGRVPAVVDLEKIHSFVRRILLDRFPEEGQKMR-ILYGGSVDVANAEDFSL 224 (264)
Q Consensus 161 ~~~iIAYEPvWA---------------IGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~-ilYGGSV~~~N~~~l~~ 224 (264)
.+.++.|.|.|. +.+|..|++.++.++...||+ .+++ |++--.+++..++.|..
T Consensus 179 ~~~~v~~H~a~~Y~~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~----------~~i~~if~e~~~~~~~~~~la~ 248 (286)
T 3gi1_A 179 SKTFVTQHTAFSYLAKRFGLKQLGISGISPEQEPSPRQLKEIQDFVKE----------YNVKTIFAEDNVNPKIAHAIAK 248 (286)
T ss_dssp CCEEEEEESCCHHHHHHTTCEEEEEECSCC---CCHHHHHHHHHHHHH----------TTCCEEEECTTSCTHHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHH----------CCCCEEEEECCCCHHHHHHHHH
T ss_conf 352588676468999983985144212467778987789999999997----------5998999848889199999999
Q ss_pred CCCCCEEEE---CHHHCCHHHHHHHHHHH
Q ss_conf 898968897---43435889999999999
Q gi|254780197|r 225 IENIDGLLV---GGASLQHELFLKIVEIV 250 (264)
Q Consensus 225 ~~~iDG~LV---G~ASl~~~~F~~Ii~~~ 250 (264)
.-++.-+-+ |...-..+.|.++++.-
T Consensus 249 ~~g~~v~~ld~l~~~~~~~~~Y~~~m~~n 277 (286)
T 3gi1_A 249 STGAKVKTLSPLEAAPSGNKTYLENLRAN 277 (286)
T ss_dssp TTTCEEEECCCSCSCCSSSCCHHHHHHHH
T ss_pred HHCCCEEEECCCCCCCCCCCCHHHHHHHH
T ss_conf 82997688577767888867799999999
No 149
>3crm_A TRNA delta(2)-isopentenylpyrophosphate transferase; ATP-binding, nucleotide-binding, nucleotidyltransferase, tRNA processing; 1.90A {Pseudomonas aeruginosa} PDB: 3crq_A 3crr_A
Probab=24.22 E-value=34 Score=14.30 Aligned_cols=54 Identities=15% Similarity=0.101 Sum_probs=34.2
Q ss_pred CCCCCCHHHHHHHCCCCEEECCHHCCCCCCCC--HHHHHHHHHHHHHCCCCEEEECCC
Q ss_conf 33212067775407310010420002213579--999999999998334747998165
Q gi|254780197|r 77 YTGDISANMLADCGANFVILGHSERRIGHRED--SYVVQSKVKSACNAGLYPIVCIGE 132 (264)
Q Consensus 77 ~TGeiSa~mL~d~g~~~viiGHSERR~~~~E~--d~~I~~K~~~al~~~l~pIlCiGE 132 (264)
-|+-.|.+.++ ++.+-++|+-+--..|.-. -....+.+..+.+.|-.||+|=|-
T Consensus 48 gTaKpt~~e~~--~i~Hhlid~~~p~~~~sv~~f~~~a~~~i~~i~~~gk~PIiVGGT 103 (323)
T 3crm_A 48 GTAKPSRELLA--RYPHRLIDIRDPAESYSAAEFRADALAAMAKATARGRIPLLVGGT 103 (323)
T ss_dssp TTTCCCHHHHH--HSCEETSSCBCTTSCCCHHHHHHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EECCCCHHHHH--CCCEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCEEEECCC
T ss_conf 88899999991--899734443387767709999999999999998359940897561
No 150
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=24.13 E-value=35 Score=14.29 Aligned_cols=43 Identities=23% Similarity=0.249 Sum_probs=26.7
Q ss_pred CCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCHHHHHHHHHHHH
Q ss_conf 43088627789878999966898968897434358899999999999
Q gi|254780197|r 205 KMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQHELFLKIVEIVE 251 (264)
Q Consensus 205 ~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~~~F~~Ii~~~~ 251 (264)
+..|+-| +-. ..-..+. -+.||+.-|.+.+-|+.+.+|.+.+.
T Consensus 171 ~~~v~~G-~d~--~~~~~~~-~G~~G~i~~~~n~~P~~~~~l~~a~~ 213 (286)
T 2r91_A 171 QARVYNG-SDS--LVFASFA-VRLDGVVASSANYLPELLAGIRDAVA 213 (286)
T ss_dssp TSEEEEC-CGG--GHHHHHH-TTCSEECCGGGTTCHHHHHHHHHHHH
T ss_pred CCCCCCC-CHH--HHHHHHH-CCCCEEEECCCCCCHHHHHHHHHHHH
T ss_conf 7767788-448--7899997-68967864501137388999999998
No 151
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=24.08 E-value=35 Score=14.28 Aligned_cols=149 Identities=14% Similarity=0.106 Sum_probs=78.1
Q ss_pred CCCCCCCCCC---CCHHHHHHH-CCCCEEEC-CHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCC
Q ss_conf 2233343321---206777540-73100104-200022135799999999999983347479981655203334980001
Q gi|254780197|r 71 IAEYGPYTGD---ISANMLADC-GANFVILG-HSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEV 145 (264)
Q Consensus 71 ~~~~GA~TGe---iSa~mL~d~-g~~~viiG-HSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~ 145 (264)
....|++|-+ -.+.|.+++ |.+|+=+= +.+.+.++-+.-+++.. .....+.|+.+.--+-+...
T Consensus 68 PNTAGc~ta~eAv~~A~laRE~~g~~~IKLEVi~D~~~L~PD~~etl~A-ae~Lv~~GF~VlpY~~~D~~---------- 136 (268)
T 2htm_A 68 PNTAGARTAEEAVRLARLGRLLTGERWVKLEVIPDPTYLLPDPLETLKA-AERLIEEDFLVLPYMGPDLV---------- 136 (268)
T ss_dssp EBCTTCCSHHHHHHHHHHHHHHHCCSEEBCCCCSCTTTTCCCHHHHHHH-HHHHHHTTCEECCEECSCHH----------
T ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHH-HHHHHHCCCEEEEECCCCHH----------
T ss_conf 5025777599999999999995298758878538854679876569999-99998589689995687899----------
Q ss_pred CCCCHH-HHHHCCCCCCCCEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCE-EEECCCCCHHHHHHHH
Q ss_conf 110022-21000000134113205135304557643112455446799999963322416430-8862778987899996
Q gi|254780197|r 146 LQKQLD-CSLPSEFKSSVPVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEEGQKMR-ILYGGSVDVANAEDFS 223 (264)
Q Consensus 146 l~~Ql~-~~l~~~~~~~~~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~-ilYGGSV~~~N~~~l~ 223 (264)
+-++|+ .+ +.-+.-.=- -||||+--...+..++ .+.+. ...+| |+=+|==.|.-+.+-+
T Consensus 137 ~ak~Le~~G------c~aVMPl~s---PIGsg~Gi~n~~~l~i------~i~~~----~~~vPvivDAGIG~pSdAa~aM 197 (268)
T 2htm_A 137 LAKRLAALG------TATVMPLAA---PIGSGWGVRTRALLEL------FAREK----ASLPPVVVDAGLGLPSHAAEVM 197 (268)
T ss_dssp HHHHHHHHT------CSCBEEBSS---STTTCCCSTTHHHHHH------HHHTT----TTSSCBEEESCCCSHHHHHHHH
T ss_pred HHHHHHHCC------CCEEEECHH---HHCCCCCCCCHHHHHH------HHHHH----CCCCCEEEECCCCCHHHHHHHH
T ss_conf 999998769------867873242---4315764038878889------99874----5778768635889989999999
Q ss_pred CCCCCCEEEECHHHCCHHHHHHHHHHH
Q ss_conf 689896889743435889999999999
Q gi|254780197|r 224 LIENIDGLLVGGASLQHELFLKIVEIV 250 (264)
Q Consensus 224 ~~~~iDG~LVG~ASl~~~~F~~Ii~~~ 250 (264)
.+ ..||+||+.|=-.+++=..|.+++
T Consensus 198 El-G~DaVLvNTAIa~a~dP~~MA~A~ 223 (268)
T 2htm_A 198 EL-GLDAVLVNTAIAEAQDPPAMAEAF 223 (268)
T ss_dssp HT-TCCEEEESHHHHTSSSHHHHHHHH
T ss_pred HC-CCCEEEECHHHHCCCCHHHHHHHH
T ss_conf 74-798999763766379989999999
No 152
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJM; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=23.41 E-value=36 Score=14.20 Aligned_cols=51 Identities=20% Similarity=0.163 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHHCCHHHCCCEEEECCCC-CHHHHHHHHCCCCCCEEEECHHHC-CHHHHHH
Q ss_conf 554467999999633224164308862778-987899996689896889743435-8899999
Q gi|254780197|r 185 EKIHSFVRRILLDRFPEEGQKMRILYGGSV-DVANAEDFSLIENIDGLLVGGASL-QHELFLK 245 (264)
Q Consensus 185 ~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV-~~~N~~~l~~~~~iDG~LVG~ASl-~~~~F~~ 245 (264)
....+.||+.+ ++||+.-|.+ +++-++++++....|.+-+||+.+ ||+ |..
T Consensus 266 ~~~~~~ik~~~---------~~pvi~~G~i~~~~~ae~~l~~g~~D~V~~gR~~iadP~-~~~ 318 (338)
T 1z41_A 266 VSFAEKIREQA---------DMATGAVGMITDGSMAEEILQNGRADLIFIGRELLRDPF-FAR 318 (338)
T ss_dssp HHHHHHHHHHH---------CCEEEECSSCCSHHHHHHHHHTTSCSEEEECHHHHHCTT-HHH
T ss_pred HHHHHHHHHHC---------CCCEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCH-HHH
T ss_conf 78999999875---------952899689499999999998799552386599886929-999
No 153
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} PDB: 3hf3_A*
Probab=23.27 E-value=36 Score=14.19 Aligned_cols=50 Identities=20% Similarity=0.100 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHHHCCHHHCCCEEEECCC-CCHHHHHHHHCCCCCCEEEECHHHC-CHH
Q ss_conf 2455446799999963322416430886277-8987899996689896889743435-889
Q gi|254780197|r 183 DLEKIHSFVRRILLDRFPEEGQKMRILYGGS-VDVANAEDFSLIENIDGLLVGGASL-QHE 241 (264)
Q Consensus 183 ~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGS-V~~~N~~~l~~~~~iDG~LVG~ASl-~~~ 241 (264)
.-......||+.+ ++|++.-|. .+++-++++++...+|.+-+||+.+ ||+
T Consensus 275 ~~~~~~~~ik~~~---------~ipvi~~G~i~~~e~ae~~l~~g~~D~V~~gR~~iadPd 326 (349)
T 3hgj_A 275 FQVPFADAVRKRV---------GLRTGAVGLITTPEQAETLLQAGSADLVLLGRVLLRDPY 326 (349)
T ss_dssp TTHHHHHHHHHHH---------CCEEEECSSCCCHHHHHHHHHTTSCSEEEESTHHHHCTT
T ss_pred CCHHHHHHHHHHC---------CCCEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHCHH
T ss_conf 3368999999875---------996899889399999999998799211598899986906
No 154
>2yyb_A Hypothetical protein TTHA1606; structural genomics, unknown function, NPPSFA; 2.60A {Thermus thermophilus HB8}
Probab=22.92 E-value=26 Score=15.05 Aligned_cols=135 Identities=12% Similarity=0.052 Sum_probs=62.4
Q ss_pred HHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCCCCCCCEE
Q ss_conf 75407310010420002213579999999999998334747998165520333498000111002221000000134113
Q gi|254780197|r 86 LADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEFKSSVPVI 165 (264)
Q Consensus 86 L~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~~~~~~iI 165 (264)
..+.|++..|.=|-==-......+....+++..++++++. ++|.--+++....+.....+.++|. +...
T Consensus 53 Ai~~g~dlIItHHP~~f~~~~~~~~~~~~~i~~li~~~I~-vy~~Ht~lD~~~~~g~~~~la~~Lg--~~~~-------- 121 (242)
T 2yyb_A 53 ALEEEVDFLIVHHGLFWGKPFPIVGHHKRRLETLFQGGIN-LYAAHLPLDAHEEVGNNFVLARELG--LVDL-------- 121 (242)
T ss_dssp HHHTTCSEEEEEECSCSSCCCCSCHHHHHHHHHHHHTTCE-EEECSHHHHHCTTTCHHHHHHHTTT--CCSC--------
T ss_pred HHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCC-EEECCCCHHHCCCCCHHHHHHHHCC--CCCC--------
T ss_conf 9987999999798501047654456079999999978961-1771356433245217999998719--7410--------
Q ss_pred EECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH---CC---HHHCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCC
Q ss_conf 205135304557643112455446799999963---32---241643088627789878999966898968897434358
Q gi|254780197|r 166 AYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDR---FP---EEGQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQ 239 (264)
Q Consensus 166 AYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~---~~---~~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~ 239 (264)
...+..-+ |..+.|...++..+.+++.+... +. +...++-|. +||=.. +....++|=++-|--+..
T Consensus 122 ~~~~~~~~--~~l~~~~t~~el~~~vk~~~~~~~~~~~~~~~~v~rVai~-~GsG~~-----~~~~~~aD~~ITGd~~~h 193 (242)
T 2yyb_A 122 TPWDVGVK--GRFPQPTPLLQVADRLGQLTGMQPLVHQGGLDHVETVILV-SGSGTG-----LLPKVDADLFVTGEPKHS 193 (242)
T ss_dssp CCCSTTCC--CCCCCCSCBSTHHHHHHHTTSSCCEEEESSCSBCCCEEEE-CSSCGG-----GGGGCCSSEEEESCCCGG
T ss_pred CCCCCCCC--EECCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEE-CCCCCC-----HHHHCCCCEEEECCCCHH
T ss_conf 13255500--0448984799999999998299834525776656579998-257642-----334146768997676889
No 155
>1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A*
Probab=22.75 E-value=35 Score=14.30 Aligned_cols=59 Identities=14% Similarity=0.140 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHHHCCHHHCCCEEE---ECCCCCHHHHHHHHCCC----CCCEEEECHHHCCHHH
Q ss_conf 45544679999996332241643088---62778987899996689----8968897434358899
Q gi|254780197|r 184 LEKIHSFVRRILLDRFPEEGQKMRIL---YGGSVDVANAEDFSLIE----NIDGLLVGGASLQHEL 242 (264)
Q Consensus 184 i~~~~~~Ir~~l~~~~~~~~~~i~il---YGGSV~~~N~~~l~~~~----~iDG~LVG~ASl~~~~ 242 (264)
+..+..+++.++.+.-.....++-|. |||---|.=+..|.+.. ++.|+.||..-+|+..
T Consensus 125 a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~inlkGi~igng~~dp~~ 190 (255)
T 1whs_A 125 AHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPVINLKGFMVGNGLIDDYH 190 (255)
T ss_dssp HHHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHHHHHTCSSCEEEEEEEEEECCBHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHH
T ss_conf 999999999999867122579727984045452478999999975787658417997266458444
No 156
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta- barrel, lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=22.11 E-value=38 Score=14.04 Aligned_cols=57 Identities=18% Similarity=0.263 Sum_probs=35.3
Q ss_pred HHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCHH------HHHHHHHHHHH
Q ss_conf 67999999633224164308862778987899996689896889743435889------99999999999
Q gi|254780197|r 189 SFVRRILLDRFPEEGQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQHE------LFLKIVEIVER 252 (264)
Q Consensus 189 ~~Ir~~l~~~~~~~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~~------~F~~Ii~~~~~ 252 (264)
.++|.. ..-| .+++++==|.|+.+|+.++++.+.+-. +||.++-+. +|.+|-+.+++
T Consensus 155 ~~lkal-~~p~----p~i~~~ptGGI~~~n~~~yl~~~~v~~--vggs~l~~~~~i~~~d~~~I~~~a~~ 217 (225)
T 1mxs_A 155 AAIKAF-GGPF----GDIRFCPTGGVNPANVRNYMALPNVMC--VGTTWMLDSSWIKNGDWARIEACSAE 217 (225)
T ss_dssp HHHHHH-HTTT----TTCEEEEBSSCCTTTHHHHHHSTTBCC--EEECTTSCHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHH-CCCC----CCCCEEEECCCCHHHHHHHHHCCCCEE--EECCCCCCHHHHCCCCHHHHHHHHHH
T ss_conf 999864-0656----677166307989889999995789199--98644479878417999999999999
No 157
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, cytoplasm; 2.00A {Neisseria meningitidis serogroup B}
Probab=21.67 E-value=39 Score=13.99 Aligned_cols=46 Identities=20% Similarity=0.224 Sum_probs=30.5
Q ss_pred CCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCHHHHHHHHHHHHHH
Q ss_conf 64308862778987899996689896889743435889999999999999
Q gi|254780197|r 204 QKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQHELFLKIVEIVERV 253 (264)
Q Consensus 204 ~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~~~F~~Ii~~~~~~ 253 (264)
+++.++.|+.-. .-+.+. -..+|+..|-+...|+.+.++++.+.+=
T Consensus 185 ~~~~v~~g~~~~---~~~~~~-~Ga~G~~~~~~~~~P~~~~~~~~~~~~g 230 (297)
T 3flu_A 185 EGFVVLSGDDHT---ALPFML-CGGHGVITVAANAAPKLFADMCRAALQG 230 (297)
T ss_dssp TTCEEEECCGGG---HHHHHH-TTCCEEEESGGGTCHHHHHHHHHHHHHT
T ss_pred CCEEEECCCHHH---HHHHHH-CCCCEEECCHHHHCHHHHHHHHHHHHCC
T ss_conf 984783585043---437886-6997532322330699999999999862
No 158
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=20.96 E-value=40 Score=13.89 Aligned_cols=46 Identities=11% Similarity=0.055 Sum_probs=30.5
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHHHCCCCCCEEEE
Q ss_conf 455764311245544679999996332241643088627789878999966898968897
Q gi|254780197|r 174 GTGRVPAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVDVANAEDFSLIENIDGLLV 233 (264)
Q Consensus 174 GtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LV 233 (264)
|||++-+-+....... ...+++-.|..+|+|+.+.+..-.-+|+=|
T Consensus 134 GtG~~~dw~~~~~~~~--------------~~~~~~LAGGl~~~NV~~ai~~~~p~gvDv 179 (205)
T 1nsj_A 134 GSGKTFDWSLILPYRD--------------RFRYLVLSGGLNPENVRSAIDVVRPFAVDV 179 (205)
T ss_dssp SCCSCCCGGGTGGGGG--------------GSSCEEEESSCCTTTHHHHHHHHCCSEEEE
T ss_pred CCCCCCCHHHHHHHHH--------------CCCCEEEECCCCHHHHHHHHHHHCCCEEEE
T ss_conf 8876454898756553--------------246347617788789999999768998997
No 159
>1w91_A Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 2.2A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 2bs9_A 2bfg_A*
Probab=20.77 E-value=40 Score=13.87 Aligned_cols=20 Identities=20% Similarity=0.198 Sum_probs=13.5
Q ss_pred HHHHHHHHCCCCEEEECCCC
Q ss_conf 99999983347479981655
Q gi|254780197|r 114 SKVKSACNAGLYPIVCIGET 133 (264)
Q Consensus 114 ~K~~~al~~~l~pIlCiGE~ 133 (264)
+=+..+.+.|+.|++|++..
T Consensus 84 ~~~d~~~~~g~~p~i~l~~~ 103 (503)
T 1w91_A 84 RIVDSYLALNIRPFIEFGFM 103 (503)
T ss_dssp HHHHHHHHTTCEEEEEECSB
T ss_pred HHHHHHHHCCCEEEEEECCC
T ss_conf 99999998799899999168
No 160
>1j8c_A Ubiquitin-like protein hplic-2; ubiquitin-like domain, structural genomics; NMR {Homo sapiens} SCOP: d.15.1.1
Probab=20.12 E-value=37 Score=14.08 Aligned_cols=45 Identities=13% Similarity=0.275 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHHHCCCCCCEE
Q ss_conf 5446799999963322416430886277898789999668989688
Q gi|254780197|r 186 KIHSFVRRILLDRFPEEGQKMRILYGGSVDVANAEDFSLIENIDGL 231 (264)
Q Consensus 186 ~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~ 231 (264)
..+..+|+.+.+.++...+..+++|+|.+=.++ ..|.+..--||.
T Consensus 52 ~TV~~LK~~I~~~~gi~~~~qrLi~~Gk~L~D~-~tL~~~~I~~g~ 96 (125)
T 1j8c_A 52 SSVQQFKEAISKRFKSQTDQLVLIFAGKILKDQ-DTLIQHGIHDGL 96 (125)
T ss_dssp CCHHHHHHHHHHHHCSCSSSEEEEETTEEESTT-SCGGGTTCSSSE
T ss_pred CCHHHHHHHHHHHHCCCHHHEEEEECCEECCCC-CCHHHCCCCCCC
T ss_conf 919999998777769796788999899887787-989997999999
Done!