HHsearch alignment for GI: 254780199 and conserved domain: TIGR03066
>TIGR03066 Gem_osc_para_1 Gemmata obscuriglobus paralogous family TIGR03066. This model represents an uncharacterized paralogous family in Gemmata obscuriglobus UQM 2246, a member of the Planctomycetes. This family shows sequence similarity to TIGR03067, which is also found in Gemmata obscuriglobus as well as in a few other species.
Probab=91.98 E-value=1 Score=24.67 Aligned_cols=104 Identities=21% Similarity=0.330 Sum_probs=67.0
Q ss_pred HHCCCCCCCCCCCCCCCCCCCEEEEEC---CCCEEEEEEECCEEEEECCCCCCCEEEEEEEEEECCCEEEEEEEECCCCC
Q ss_conf 405777656653337676562025726---89814468608789984257777466544688516857999997200388
Q gi|254780199|r 23 SCSALSVVVDSSELLPEPMDITGYWED---DNGILSYFQKDGKFKTISTDGSSSVLATGSYHVKINQDVEIKLTSLIRNT 99 (160)
Q Consensus 23 ac~~~~~~~~~~~~~P~P~gVeG~W~D---~NGivSsf~~~G~F~TrstDGTn~~LA~GTY~~~~~~~VEIn~tSlvR~T 99 (160)
T Consensus 4 a~~~~~~a~~~~ek~-Da~kLvGKW~~~~~~~~vviEF~kdGkl~v~~~~~Gk~vk~~GTYkl~G~k-Lt~~l~~gg~e~ 81 (111)
T TIGR03066 4 ALAGGGRADDKDEKI-DAKKLVGKWETSKTKDDVVIEFAKDGKLVVTIGEKGKEVKADGTYKLDGNK-LTLTLKAGGKEK 81 (111)
T ss_pred EECCCCCCCCCCCCC-CHHHHEEEEEECCCCCEEEEEEECCCEEEEEECCCCEEEEECCEEEEECCE-EEEEEECCCEEE
T ss_conf 981455368864235-877933541617877507999914987999975698389835479974578-789980587062
Q ss_pred CEEEEEEEECCCEEEEECCCCCEEEEEEE
Q ss_conf 30589996063436676067987999973
Q gi|254780199|r 100 SGKIQCQFLDSNKLNCLAKDQKQFYLRRT 128 (160)
Q Consensus 100 ~skVnC~L~spsQLnCTS~sG~QF~L~Rt 128 (160)
T Consensus 82 k~tlTv~kltd~elv~~d~~gk~~t~~Rv 110 (111)
T TIGR03066 82 KETLTVKKLTDDELVGKDPDGKKDTLKRV 110 (111)
T ss_pred EEEEEEEEECCCCEEEECCCCCHHHEEEC
T ss_conf 24789997136425876899980340562