HHsearch alignment for GI: 254780201 and conserved domain: cd06421
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=97.15 E-value=0.022 Score=34.56 Aligned_cols=194 Identities=10% Similarity=0.145 Sum_probs=102.1
Q ss_pred CCEEEEEEECCH--HHHHHHHHHHHHCCCC---EEEEEECCCCHHH---HHHHHHHCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 473899994167--7899999999708998---1499971765289---9999971178738999456660479999862
Q gi|254780201|r 149 SKIAIVVHCYYQ--DTWIEISHILLRLNFD---FDLFVTVVEANKD---FEQDVLKYFPSAQLYVMENKGRDVRPFLYLL 220 (394)
Q Consensus 149 ~kIAVvlHlyY~--DLl~E~~~~L~~ip~~---~DL~ITt~~~~~~---~~~~~~~~~~~a~V~vv~NRGRDI~PfL~~~ 220 (394)
T Consensus 1 P~VsViIPayNE~~~~i~~~l~sl~~q~YP~~~~eIiVvdD~std~t~~~~~~~~~~~~~~~~~~~~~~g~Ka~alN~g~ 80 (234)
T cd06421 1 PTVDVFIPTYNEPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRRPELRALAAELGVEYGYRYLTRPDNRHAKAGNLNNAL 80 (234)
T ss_pred CEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHH
T ss_conf 93999998389978999999999996799998289999989898788988888456643688874889997699999999
Q ss_pred CCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCC
Q ss_conf 21002786789997368776777764440789999998747998999999999760997689816876544332345543
Q gi|254780201|r 221 ELGVFDRYDYLCKIHGKKSQREGYHPIEGIIWRRWLFFDLLGFSDIAIRIINTFEQNPCLGMIGSRRYRRYKRWSFFAKR 300 (394)
Q Consensus 221 ~~~~l~~YD~v~klHtKKS~~~~~~~~~G~~Wr~~Ll~~LLGs~~~v~~Il~~F~~~p~lGlv~p~~~~~~~~~~~~~~~ 300 (394)
T Consensus 81 ~---~a~gd~v~~~DaD~----------------------~~~~~~L~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~ 135 (234)
T cd06421 81 A---HTTGDFVAILDADH----------------------VPTPDFLRRTLGYFLDDPKVALVQTPQFFYNPDPFDWLAD 135 (234)
T ss_pred H---HCCCCEEEEECCCC----------------------CCCHHHHHHHHHHHHHCCCEEEEECCEEEECCCCCCHHHH
T ss_conf 9---77899999988987----------------------7087699999999986997589953567734883328999
Q ss_pred -CCCHHH-HHHHHHHCCCCCCCCCCCCCCEEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
Q ss_conf -221389-999999748998855477377012332098887576588223585446888873899999999999998698
Q gi|254780201|r 301 -SEVYRR-VIDLAKRAGFPTKRLHLDFFNGTMFWVKPKCLEPLRNLHLIGEFEEERNLKDGALEHAVERFFACSVRYTEF 378 (394)
Q Consensus 301 -~~~~~~-~~~L~~rlgi~~~~~~~~FpaGSMFW~R~~AL~pL~~l~l~~DF~~E~g~~DGTlaHAIERl~~~iv~~~gf 378 (394)
T Consensus 136 ~~~~~~~~~~~~~~~-~~--~~~~~~~~~G~~~~~rr~~l~~vGg------f~~~------~~~--ED~dl~~rl~~~G~ 198 (234)
T cd06421 136 GAPNEQELFYGVIQP-GR--DRWGAAFCCGSGAVVRREALDEIGG------FPTD------SVT--EDLATSLRLHAKGW 198 (234)
T ss_pred HHHHHHHHHHHHHHH-HH--HCCCCEEECCCHHHHHHHHHHHCCC------CCCC------CCC--HHHHHHHHHHHCCC
T ss_conf 999999999999998-87--3388425535506788999998189------9999------976--59999999997699
Q ss_pred EEEEEH
Q ss_conf 033524
Q gi|254780201|r 379 SIESVD 384 (394)
Q Consensus 379 ~i~~v~ 384 (394)
T Consensus 199 k~~y~p 204 (234)
T cd06421 199 RSVYVP 204 (234)
T ss_pred EEEEEC
T ss_conf 799936