RPSBLAST alignment for GI: 254780201 and conserved domain: pfam05045
>gnl|CDD|113802 pfam05045, RgpF, Rhamnan synthesis protein F. This family consists of a group of proteins which are related to the Streptococcus rhamnose-glucose polysaccharide assembly protein (RgpF). Rhamnan backbones are found in several O polysaccharides of phytopathogenic bacteria and are regarded as pathogenic factors. Length = 498
Score = 106 bits (265), Expect = 2e-23
Identities = 74/231 (32%), Positives = 108/231 (46%), Gaps = 16/231 (6%)
Query: 150 KIAIVVHCYYQDTWIEISHILLRLNFDFDLFVTVVEANKDFE-QDVLKYFP---SAQLYV 205
KIA+ H YY D EI + F +DL +T +K E +++L +A + V
Sbjct: 266 KIAVHAHVYYVDMLDEILTAFKNIPFSYDLIITTDTDDKKAEIEEILAKRKGAKNAIVRV 325
Query: 206 MENKGRDVRPFLYLL-ELGVFDRYDYLCKIHGKKSQREGYHPIEGIIWRRWLFFDLLGFS 264
++N+GRD+ P L L + V DRYD +C+ H KKS + G ++ L +LL
Sbjct: 326 VQNRGRDMSPLLISLKDELVDDRYDLVCRFHTKKS-PQADFWA-GESFKEELIDNLLKPR 383
Query: 265 DIAIRIINTFEQNPCLGM-IGSRRYRRYKRW--SFFAKRSEVYRRVIDLAKRAGFPTKRL 321
A I+ FEQNP +G+ I + RY ++ E+ LA+R G K
Sbjct: 384 GYADNILAMFEQNPSIGLVIPDIVHIRYPTIGNAWNENAPEM----NKLARRMGIKKKFD 439
Query: 322 HLDFFN--GTMFWVKPKCLEPLRNLHLIGEFEEERNLKDGALEHAVERFFA 370
GTMFW +P+ L+ L L E L D +L HA+ER A
Sbjct: 440 DNTPVASYGTMFWFRPEALKKLFELEWKWEDFPNEPLPDNSLLHAIERLLA 490