HHsearch alignment for GI: 254780202 and conserved domain: PRK08208

Probab=91.39  E-value=0.5  Score=27.73  Aligned_cols=106  Identities=19%  Similarity=0.262  Sum_probs=54.3

Q ss_pred             CCCCEEEEEECCCCCCCCCCC--------CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CHHHHH
Q ss_conf             630124477510558401373--------1599976898887555333323688887757523258886607--899999
Q gi|254780202|r    2 KLYSIKEIFLTLQGEGGHAGR--------VAVFCRFSGCNLWSGREQDRLSAQCRFCDTDFVGIQGTKGGRY--NVDQLA   71 (211)
Q Consensus         2 ~~~~i~EiF~SiQGEG~~~G~--------p~vFiRl~GCnL~c~~~~~~~~~~C~~CDT~y~~~~~~~~~~~--~~~~i~   71 (211)
T Consensus        17 ~sYP~a~~f~~~~~~~~~~~~~~~~~~~~LsLYiHiPFC~~-----------~C~YC~f-~~~~~-~~~~~~~~Y~~aL~   83 (436)
T PRK08208         17 YSYPHKTAYRELEPNVSLSEVWPREYEDALHLYIHIPFCES-----------RCGFCNL-FTCTG-ADNEFIDSYLDALI   83 (436)
T ss_pred             CCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCC-----------CCCCCCC-CCCCC-CCHHHHHHHHHHHH
T ss_conf             68998211688887676999984399997499987044079-----------5889998-37668-98338999999999


Q ss_pred             HHHHHHHHC-CCCCCCEEEEECCCCCCC---CCCHHHHHHHHC-C-----CEEEEECCC
Q ss_conf             999987521-667873899807720000---351789999868-9-----879997278
Q gi|254780202|r   72 DLIEEQWIT-GEKEGRYCVLTGGEPLLQ---VDVPLIQALNKR-G-----FEIAVETNG  120 (211)
Q Consensus        72 ~~i~~~~~~-~~~~~~~VviTGGEPllq---~l~~L~~~l~~~-g-----~~v~IETnG  120 (211)
T Consensus        84 ~Ei~~~~~~~~~~~~~tiy~GGGTPS~L~~~~l~~ll~~l~~~f~~~~~~~EiTiE~nP  142 (436)
T PRK08208         84 RQARQVALALGGVHFASFAVGGGTPTLLNIAQLEKLFFSVFDVLGVDLWNIPKSVETSP  142 (436)
T ss_pred             HHHHHHHHHCCCCCEEEEEECCCHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECC
T ss_conf             99999876638983568996794322199999999999999858998467159998663