HHsearch alignment for GI: 254780202 and conserved domain: pfam04055

>pfam04055 Radical_SAM Radical SAM superfamily. Radical SAM proteins catalyse diverse reactions, including unusual methylations, isomerisation, sulphur insertion, ring formation, anaerobic oxidation and protein radical formation.
Probab=98.37  E-value=3.1e-06  Score=63.05  Aligned_cols=98  Identities=34%  Similarity=0.540  Sum_probs=66.0

Q ss_pred             ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC-CCHHHHH
Q ss_conf             768988875553333236888877575232588866078999999999875216678738998077200003-5178999
Q gi|254780202|r   28 RFSGCNLWSGREQDRLSAQCRFCDTDFVGIQGTKGGRYNVDQLADLIEEQWITGEKEGRYCVLTGGEPLLQV-DVPLIQA  106 (211)
Q Consensus        28 Rl~GCnL~c~~~~~~~~~~C~~CDT~y~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~VviTGGEPllq~-l~~L~~~  106 (211)
T Consensus         3 ~~~gC~~-----------~C~fC~~~~~-~~~~~~~~~~~~~i~~~~~~~~~---~~~~~i~~~gg~p~~~~~~~~~~~~   67 (165)
T pfam04055         3 ITPGCNL-----------RCTYCAFPSI-RARGKGRELSPEEILEEAKELAR---LGVEVVILTGGEPLLLPDLVELLER   67 (165)
T ss_pred             ECCCCCC-----------CCCCCCCCCC-CCCCCCCCCCHHHHHHHHHHHHH---CCCEEEEEECCCCCCCHHHHHHHHH
T ss_conf             8937487-----------7968999785-78886522699999999988874---5985999931676665277777888


Q ss_pred             HHH----CCCEEEEECCCCCCCC--------CCCEEEEECCCCCCC
Q ss_conf             986----8987999727888667--------885079841677741
Q gi|254780202|r  107 LNK----RGFEIAVETNGTIEPP--------QGIDWICVSPKAGCD  140 (211)
Q Consensus       107 l~~----~g~~v~IETnGt~~~~--------~~~d~it~SPK~~~~  140 (211)
T Consensus        68 ~~~~~~~~~~~~~~~t~~~~~~~~~~~~l~~~g~~~i~~~ie~~~~  113 (165)
T pfam04055        68 LLKLEELEGIRITLETNGTLLDEELLEELKEAGLDRVSISLQSGDD  113 (165)
T ss_pred             HHHHCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCH
T ss_conf             7653146764899998514331045689997198522246355999