HHsearch alignment for GI: 254780205 and conserved domain: PRK04375
>PRK04375 protoheme IX farnesyltransferase; Provisional.
Probab=100.00 E-value=0 Score=413.40 Aligned_cols=285 Identities=21% Similarity=0.275 Sum_probs=242.6
Q ss_pred HCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 10546778999986304853159989999999998521234334456421699999999999999899999964138877
Q gi|254780205|r 13 CIMGSAIAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDI 92 (310)
Q Consensus 13 ~~~~~~i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~di 92 (310)
T Consensus 10 ~~~r~~lk~y~~L~---Kp~i~~l~~~t~~~g~~lA~~~~---------~~~~~~~~~~~g~~l~~~aa~~~N~~~d~di 77 (303)
T PRK04375 10 RSSRATFKDYLALT---KPRVVSLNLFTALVGMLLAPPGL---------VNPPLLLLTLLGIALGAGAAGALNNYIDRDI 77 (303)
T ss_pred CCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHCCCC---------CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 97142099999996---39999999999999999956789---------9999999999999999999999977721041
Q ss_pred CCCCCCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHH-HHHCCC-CCCCCCCCCHHHHHHHH
Q ss_conf 84342343101001233210110013443100034555-4444432100356544-431166-55554332001010014
Q gi|254780205|r 93 DSQVLRTRSRPLPSGQCTRFQALVFAVLQFLISFVLLL-QFNPFVICVGFALLFI-SLLYPF-SKRFILCPQVVLGIGFA 169 (310)
Q Consensus 93 D~~~~RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~-~ln~~~~~l~~~~~~~-~~iYp~-~KR~t~~p~~~lG~~~~ 169 (310)
T Consensus 78 D~~m~RT~~RPlpsG~is~~~a~~~~~~l~~~g~~~l~~~~n~l~~~l~~~~~~~Y~~iYt~~lKR~t~~~~~vGgi~Ga 157 (303)
T PRK04375 78 DAIMERTKNRPLVTGRISPREALVFGLVLGVLGFLLLWLFVNPLAAWLTLAGIFFYVVVYTLWLKRRTPQNIVIGGAAGA 157 (303)
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHH
T ss_conf 66788889985215887899999999999999999999998899999999999988875349987155244699898745
Q ss_pred HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHH-HHHHHHHHH
Q ss_conf 5663011145754320246888887421003579988875310002572034665420204666533789-999999999
Q gi|254780205|r 170 GGVFVGWGALHASFSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQTKLWLFILYGI-FVLCFMVAF 248 (310)
Q Consensus 170 ~~~l~g~~av~g~~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~~~~~~i~~~~~~-~~~~~~~~~ 248 (310)
T Consensus 158 ~ppl~Gw~Av~g~~~~~~~~Lf~~~~~Wq~pHf~alA~~~~~DY~~aG~~mlPv~~g~~~t~~~~~~~~~~l~~~s~~~~ 237 (303)
T PRK04375 158 MPPLIGWAAVTGSISWEALILFLIIFLWTPPHFWALAIFRRDDYAAAGIPMLPVVHGIRVTKRQILLYTILLAAVTLLPV 237 (303)
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 57888899965999789999999999998687899999861069867973043145759899999999999999998999
Q ss_pred HHHCCCHHHHHHHHHHH-HHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 98353379999999999-99999999808999-799999987645999999999999986521
Q gi|254780205|r 249 CLLTVNFFAWIGLLIAL-FLTIKRIIALDISC-SKQCCSFFHSAGVVGILILICLIISLFLDQ 309 (310)
Q Consensus 249 ~~~~~~~~~~~~~l~~~-~~l~~~i~~~~~~~-~~~~~k~Fk~n~~~g~ii~~~iild~lL~~ 309 (310)
T Consensus 238 ~~~~~g~~y~~~a~~~~~~~l~~~~~~~~~~~~~~~ar~lF~~S~~yL~llf~~lvlD~ll~~ 300 (303)
T PRK04375 238 LVGMAGWVYLVVALLLGAGFLYYAWRLYRDPDDKKWARKLFRYSINYLTLLFVALLVDHLLPL 300 (303)
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 980020999999999999999999999838896499999999999999999999999998858