HHsearch alignment for GI: 254780205 and conserved domain: PRK04375

>PRK04375 protoheme IX farnesyltransferase; Provisional.
Probab=100.00  E-value=0  Score=413.40  Aligned_cols=285  Identities=21%  Similarity=0.275  Sum_probs=242.6

Q ss_pred             HCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             10546778999986304853159989999999998521234334456421699999999999999899999964138877
Q gi|254780205|r   13 CIMGSAIAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDI   92 (310)
Q Consensus        13 ~~~~~~i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~di   92 (310)
T Consensus        10 ~~~r~~lk~y~~L~---Kp~i~~l~~~t~~~g~~lA~~~~---------~~~~~~~~~~~g~~l~~~aa~~~N~~~d~di   77 (303)
T PRK04375         10 RSSRATFKDYLALT---KPRVVSLNLFTALVGMLLAPPGL---------VNPPLLLLTLLGIALGAGAAGALNNYIDRDI   77 (303)
T ss_pred             CCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHCCCC---------CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             97142099999996---39999999999999999956789---------9999999999999999999999977721041


Q ss_pred             CCCCCCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHH-HHHCCC-CCCCCCCCCHHHHHHHH
Q ss_conf             84342343101001233210110013443100034555-4444432100356544-431166-55554332001010014
Q gi|254780205|r   93 DSQVLRTRSRPLPSGQCTRFQALVFAVLQFLISFVLLL-QFNPFVICVGFALLFI-SLLYPF-SKRFILCPQVVLGIGFA  169 (310)
Q Consensus        93 D~~~~RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~-~ln~~~~~l~~~~~~~-~~iYp~-~KR~t~~p~~~lG~~~~  169 (310)
T Consensus        78 D~~m~RT~~RPlpsG~is~~~a~~~~~~l~~~g~~~l~~~~n~l~~~l~~~~~~~Y~~iYt~~lKR~t~~~~~vGgi~Ga  157 (303)
T PRK04375         78 DAIMERTKNRPLVTGRISPREALVFGLVLGVLGFLLLWLFVNPLAAWLTLAGIFFYVVVYTLWLKRRTPQNIVIGGAAGA  157 (303)
T ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHH
T ss_conf             66788889985215887899999999999999999999998899999999999988875349987155244699898745


Q ss_pred             HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHH-HHHHHHHHH
Q ss_conf             5663011145754320246888887421003579988875310002572034665420204666533789-999999999
Q gi|254780205|r  170 GGVFVGWGALHASFSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQTKLWLFILYGI-FVLCFMVAF  248 (310)
Q Consensus       170 ~~~l~g~~av~g~~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~~~~~~i~~~~~~-~~~~~~~~~  248 (310)
T Consensus       158 ~ppl~Gw~Av~g~~~~~~~~Lf~~~~~Wq~pHf~alA~~~~~DY~~aG~~mlPv~~g~~~t~~~~~~~~~~l~~~s~~~~  237 (303)
T PRK04375        158 MPPLIGWAAVTGSISWEALILFLIIFLWTPPHFWALAIFRRDDYAAAGIPMLPVVHGIRVTKRQILLYTILLAAVTLLPV  237 (303)
T ss_pred             HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             57888899965999789999999999998687899999861069867973043145759899999999999999998999


Q ss_pred             HHHCCCHHHHHHHHHHH-HHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             98353379999999999-99999999808999-799999987645999999999999986521
Q gi|254780205|r  249 CLLTVNFFAWIGLLIAL-FLTIKRIIALDISC-SKQCCSFFHSAGVVGILILICLIISLFLDQ  309 (310)
Q Consensus       249 ~~~~~~~~~~~~~l~~~-~~l~~~i~~~~~~~-~~~~~k~Fk~n~~~g~ii~~~iild~lL~~  309 (310)
T Consensus       238 ~~~~~g~~y~~~a~~~~~~~l~~~~~~~~~~~~~~~ar~lF~~S~~yL~llf~~lvlD~ll~~  300 (303)
T PRK04375        238 LVGMAGWVYLVVALLLGAGFLYYAWRLYRDPDDKKWARKLFRYSINYLTLLFVALLVDHLLPL  300 (303)
T ss_pred             HHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             980020999999999999999999999838896499999999999999999999999998858