HHsearch alignment for GI: 254780205 and conserved domain: PRK08238

>PRK08238 hypothetical protein; Validated.
Probab=99.82  E-value=2.9e-19  Score=136.39  Aligned_cols=169  Identities=21%  Similarity=0.260  Sum_probs=129.4

Q ss_pred             CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             54677899998630485315998999999999852123433445642169999999999999989999996413887784
Q gi|254780205|r   15 MGSAIAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDIDS   94 (310)
Q Consensus        15 ~~~~i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~diD~   94 (310)
T Consensus       189 ~~~~~~~~lk~lRphQW~KNllvF~Pl~~a~~~~----------~~~-~~~~~~~aF~~Fsl~ASsvYi~NDl~D~e~DR  257 (481)
T PRK08238        189 APPSLRTWLKALRVHQWLKNLLVFVPLLAAHDFG----------DLQ-AVLAALLAFLAFSLCASAVYILNDLLDLEADR  257 (481)
T ss_pred             CCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHCC----------CHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             9867999999869899988689999998724205----------899-99999999999999996989886086787541


Q ss_pred             CCCCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCC-CCCCCCCCCHHHHHHHHHHHH
Q ss_conf             3423431010012332101100134431000345554444432100356544431166-555543320010100145663
Q gi|254780205|r   95 QVLRTRSRPLPSGQCTRFQALVFAVLQFLISFVLLLQFNPFVICVGFALLFISLLYPF-SKRFILCPQVVLGIGFAGGVF  173 (310)
Q Consensus        95 ~~~RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~~ln~~~~~l~~~~~~~~~iYp~-~KR~t~~p~~~lG~~~~~~~l  173 (310)
T Consensus       258 ~Hp~Kr~RP~ASG~ls~~~~~~~~~~ll~~~~~~a~~~~~~f~~~l~~Y~~lt~~YS~~LK~i~iiDv~~la~~f~lRii  337 (481)
T PRK08238        258 AHPRKRRRPFASGALPIPFGLAAAPVLLLAALALALALSPAFLLVLLAYLVLTLAYSLRLKRKALIDVLTLAGLYTLRII  337 (481)
T ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf             68624569777788898899999999999999999996799999999999999999999754267589999989999998


Q ss_pred             HCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             01114575432024688888742
Q gi|254780205|r  174 VGWGALHASFSWPAFFLCIGTIF  196 (310)
Q Consensus       174 ~g~~av~g~~~~~~~~L~~~~~~  196 (310)
T Consensus       338 aG~~a~--~i~~S~WLl~fs~f~  358 (481)
T PRK08238        338 AGAVAV--GVALSFWLLAFSMFF  358 (481)
T ss_pred             HHHHHC--CCCCCHHHHHHHHHH
T ss_conf             526230--778749999999999