HHsearch alignment for GI: 254780205 and conserved domain: PRK08238
>PRK08238 hypothetical protein; Validated.
Probab=99.82 E-value=2.9e-19 Score=136.39 Aligned_cols=169 Identities=21% Similarity=0.260 Sum_probs=129.4
Q ss_pred CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 54677899998630485315998999999999852123433445642169999999999999989999996413887784
Q gi|254780205|r 15 MGSAIAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDIDS 94 (310)
Q Consensus 15 ~~~~i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~diD~ 94 (310)
T Consensus 189 ~~~~~~~~lk~lRphQW~KNllvF~Pl~~a~~~~----------~~~-~~~~~~~aF~~Fsl~ASsvYi~NDl~D~e~DR 257 (481)
T PRK08238 189 APPSLRTWLKALRVHQWLKNLLVFVPLLAAHDFG----------DLQ-AVLAALLAFLAFSLCASAVYILNDLLDLEADR 257 (481)
T ss_pred CCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHCC----------CHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 9867999999869899988689999998724205----------899-99999999999999996989886086787541
Q ss_pred CCCCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCC-CCCCCCCCCHHHHHHHHHHHH
Q ss_conf 3423431010012332101100134431000345554444432100356544431166-555543320010100145663
Q gi|254780205|r 95 QVLRTRSRPLPSGQCTRFQALVFAVLQFLISFVLLLQFNPFVICVGFALLFISLLYPF-SKRFILCPQVVLGIGFAGGVF 173 (310)
Q Consensus 95 ~~~RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~~ln~~~~~l~~~~~~~~~iYp~-~KR~t~~p~~~lG~~~~~~~l 173 (310)
T Consensus 258 ~Hp~Kr~RP~ASG~ls~~~~~~~~~~ll~~~~~~a~~~~~~f~~~l~~Y~~lt~~YS~~LK~i~iiDv~~la~~f~lRii 337 (481)
T PRK08238 258 AHPRKRRRPFASGALPIPFGLAAAPVLLLAALALALALSPAFLLVLLAYLVLTLAYSLRLKRKALIDVLTLAGLYTLRII 337 (481)
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 68624569777788898899999999999999999996799999999999999999999754267589999989999998
Q ss_pred HCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 01114575432024688888742
Q gi|254780205|r 174 VGWGALHASFSWPAFFLCIGTIF 196 (310)
Q Consensus 174 ~g~~av~g~~~~~~~~L~~~~~~ 196 (310)
T Consensus 338 aG~~a~--~i~~S~WLl~fs~f~ 358 (481)
T PRK08238 338 AGAVAV--GVALSFWLLAFSMFF 358 (481)
T ss_pred HHHHHC--CCCCCHHHHHHHHHH
T ss_conf 526230--778749999999999