HHsearch alignment for GI: 254780205 and conserved domain: PRK12848
>PRK12848 ubiA 4-hydroxybenzoate octaprenyltransferase; Reviewed.
Probab=100.00 E-value=0 Score=555.49 Aligned_cols=282 Identities=33% Similarity=0.541 Sum_probs=271.1
Q ss_pred CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 54677899998630485315998999999999852123433445642169999999999999989999996413887784
Q gi|254780205|r 15 MGSAIAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDIDS 94 (310)
Q Consensus 15 ~~~~i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~diD~ 94 (310)
T Consensus 1 L~~k~~~Y~~L~Rl~kP~g~~Ll~~p~~~g~~la~~g~~---------~~~~l~~~~~g~~~~r~agc~~Nd~~DrdiD~ 71 (282)
T PRK12848 1 LQDRLLAYARLMRLDKPIGTLLLLWPTLWALWLAADGIP---------DLWVLVIFVLGVFLMRAAGCVINDYADRDFDG 71 (282)
T ss_pred CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 927799999998426861159999999999998568999---------88999999999999999998999998872325
Q ss_pred CCCCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 34234310100123321011001344310003455544444321003565444311665555433200101001456630
Q gi|254780205|r 95 QVLRTRSRPLPSGQCTRFQALVFAVLQFLISFVLLLQFNPFVICVGFALLFISLLYPFSKRFILCPQVVLGIGFAGGVFV 174 (310)
Q Consensus 95 ~~~RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~~ln~~~~~l~~~~~~~~~iYp~~KR~t~~p~~~lG~~~~~~~l~ 174 (310)
T Consensus 72 ~~~RTk~RPl~~G~is~~~A~~~~~~~~~~~~~~l~~ln~~~~~l~~~~~~~~~iYp~~KR~t~~p~~~lG~~~~~~~l~ 151 (282)
T PRK12848 72 HVKRTKNRPLASGAVSEKEALALFVVLVLVAFLLVLTLNTLTIWLSVAALALAFIYPFMKRYTHLPQVVLGAAFGWGIPM 151 (282)
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 89888999887772679999999999999999999999999999999999999888765764137502999998756666
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 11145754320246888887421003579988875310002572034665420204666533789999999999983533
Q gi|254780205|r 175 GWGALHASFSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQTKLWLFILYGIFVLCFMVAFCLLTVN 254 (310)
Q Consensus 175 g~~av~g~~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 254 (310)
T Consensus 152 g~~a~~g~~~~~~~~L~~~~~~Wt~~~d~~yA~~D~~dD~~~Gv~S~av~~G~~~~~~i~~~~~~~~~l~~~~g~~~~~~ 231 (282)
T PRK12848 152 AFAAVQGSVPLEAWLLFLANILWTVAYDTQYAMVDRDDDLKIGIKSTAILFGRYDKLIIGLLQLATLALLALAGWLLGLG 231 (282)
T ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 89997499988999999999999999889999705653976699964588650018999999999999999999997373
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 799999999999999999980899979999998764599999999999998
Q gi|254780205|r 255 FFAWIGLLIALFLTIKRIIALDISCSKQCCSFFHSAGVVGILILICLIISL 305 (310)
Q Consensus 255 ~~~~~~~l~~~~~l~~~i~~~~~~~~~~~~k~Fk~n~~~g~ii~~~iild~ 305 (310)
T Consensus 232 ~~y~~~~~~~~~~l~~q~~~v~~~d~~~~~~~F~~N~~~g~ilf~gi~ldy 282 (282)
T PRK12848 232 WGYYWGLLVAAALFVYQQKLIRDREREACFKAFLNNNWVGLVLFAGIAASY 282 (282)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 999999999999999999980699889999999973999999999999419