HHsearch alignment for GI: 254780205 and conserved domain: PRK12875

>PRK12875 ubiA prenyltransferase; Reviewed.
Probab=99.82  E-value=4e-19  Score=135.55  Aligned_cols=258  Identities=17%  Similarity=0.192  Sum_probs=156.7

Q ss_pred             HHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH--HHHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf             9863048531599899999999985212343344564216999999999--99999899999964138877843423431
Q gi|254780205|r   24 YLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIV--GAIVTRGAACTWNDLVDHDIDSQVLRTRS  101 (310)
Q Consensus        24 ~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~--G~~~~r~ag~~~Nd~~D~diD~~~~RT~~  101 (310)
T Consensus        10 ~Ll~~SRP~~WvnTagp~~~g~~la~~~~~~~~~----~~~~~~~i~Fl~PyNllmYG----INDvfD~esD~~NPRKGG   81 (281)
T PRK12875         10 YLFRLSRPRFWLYLGGPVVVGVAYGATTVGELFS----PAAVLLFLYFLFPANIFLYG----VNDWFDADTDETNPKKDG   81 (281)
T ss_pred             HHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHCC----HHHHHHHHHHHHHHHHHHHC----CCHHHHHHHCCCCCCCCC
T ss_conf             9999667068886130899999995566134428----89999999998777788734----423332121034887667


Q ss_pred             HHHHCCCCCHHHCCCHHHHH-HHHHCCCCCCCCCCCCCCHHHHHHHHHHCCC-CCCCCCCCCHHHHH---HHHHHHHHCC
Q ss_conf             01001233210110013443-1000345554444432100356544431166-55554332001010---0145663011
Q gi|254780205|r  102 RPLPSGQCTRFQALVFAVLQ-FLISFVLLLQFNPFVICVGFALLFISLLYPF-SKRFILCPQVVLGI---GFAGGVFVGW  176 (310)
Q Consensus       102 RPl~sG~is~~~A~~~~~~l-~~l~~~~~~~ln~~~~~l~~~~~~~~~iYp~-~KR~t~~p~~~lG~---~~~~~~l~g~  176 (310)
T Consensus        82 ~E---~~~~~~~~~~~~v~~~~~~~~~f~l~~~~~~~~~l~~~~f~~~~YSappLRFKerP~L-DS~Sn~~yv~P~v~~~  157 (281)
T PRK12875         82 RE---VRYRGDAAVAAIVVLTGALSLLFLAPLPLAGWPYLLAFLFLSYEYSAPPLRFKTTPVL-DSLSNGLYILPGIAAY  157 (281)
T ss_pred             CC---CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC-CCCCCHHHHHHHHHHH
T ss_conf             33---3457874457999998799999998503889999999999998613885255665030-0002023650699999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH-HCHHHHHHHHHHHHHHHHHHHHHHHCCCH
Q ss_conf             14575432024688888742100357998887531000257203466542-02046665337899999999999835337
Q gi|254780205|r  177 GALHASFSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFS-YQTKLWLFILYGIFVLCFMVAFCLLTVNF  255 (310)
Q Consensus       177 ~av~g~~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  255 (310)
T Consensus       158 al~~g~~p--~~~~l~a~~lW~ma~HaF~AvqDI~~DR~aGI~T~AT~LGar~T~~~~~~~wl~aa~~~~~~~~p~~~~-  234 (281)
T PRK12875        158 ALASGALP--PLAAVAAGWLWAMGMHTFSAIPDIEPDRAAGIQTTATFLGRRRALAYCAGCWLLAAAVFAFVDVPFSLL-  234 (281)
T ss_pred             HHHCCCCC--CHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHH-
T ss_conf             98526775--199999999999998773445777401332840000144433689999999999999996036308999-


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH-HHHHHHHHHHHHHHH
Q ss_conf             999999999999999999808999799999987-645999999999999
Q gi|254780205|r  256 FAWIGLLIALFLTIKRIIALDISCSKQCCSFFH-SAGVVGILILICLII  303 (310)
Q Consensus       256 ~~~~~~l~~~~~l~~~i~~~~~~~~~~~~k~Fk-~n~~~g~ii~~~iil  303 (310)
T Consensus       235 ------~l~yp~~~~~~~~~~-~~~~ray~~fpaiN~~~G~~~tl~~lw  276 (281)
T PRK12875        235 ------LLIYPVLVFAILLLG-IAIDRAYWWYPAVNTAVGMLLTLGALW  276 (281)
T ss_pred             ------HHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             ------999999999996165-423368999899998999999999999