HHsearch alignment for GI: 254780205 and conserved domain: PRK13592
>PRK13592 ubiA prenyltransferase; Provisional.
Probab=98.55 E-value=1.2e-05 Score=53.55 Aligned_cols=183 Identities=15% Similarity=0.232 Sum_probs=97.9
Q ss_pred HHHHHCCCCCCCCCCCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCC-CC-CCCC---
Q ss_conf 996413887784342343101001233210110013443100034555444443210035654443116-65-5554---
Q gi|254780205|r 83 TWNDLVDHDIDSQVLRTRSRPLPSGQCTRFQALVFAVLQFLISFVLLLQFNPFVICVGFALLFISLLYP-FS-KRFI--- 157 (310)
Q Consensus 83 ~~Nd~~D~diD~~~~RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~~ln~~~~~l~~~~~~~~~iYp-~~-KR~t--- 157 (310)
T Consensus 64 IaDEFKDyE~D~ryr--p~RplPrG~VtlkdL~i~g~~~~ai~i~l~~lf~~~il~~~-----~v~iY~~LM~~eFF~~e 136 (299)
T PRK13592 64 IADDFKDYETDRRLF--PHRALPSGRVKKKDLAIALSFIVAVSVLLNVLFMNNVGWFL-----FLYIYGTLMSFWFFKRD 136 (299)
T ss_pred HHHHHCCHHHHHHCC--CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH-----HHHHHHHHHHHHHCCHH
T ss_conf 875630466787508--77889867664999999999999999999999844458899-----99999999999974399
Q ss_pred CC-CCHHHHHHHHHH--HHH-----CC--CCCCCC-CCHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
Q ss_conf 33-200101001456--630-----11--145754-3202468----888874210035799888753100025720346
Q gi|254780205|r 158 LC-PQVVLGIGFAGG--VFV-----GW--GALHAS-FSWPAFF----LCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTA 222 (310)
Q Consensus 158 ~~-p~~~lG~~~~~~--~l~-----g~--~av~g~-~~~~~~~----L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSla 222 (310)
T Consensus 137 wL~k~l~lylvSHm~Im~li~lyiisf~~~~~~lp~~~~~~~l~~~t~yf~gli~EI~RKi-----raPeeE~e~V-TYS 210 (299)
T PRK13592 137 KIQNSLPLALVTHNPVMMILNLYTISFVCYKYNLPLLSLPTVLLAFTMYFPSLIWEVCRKI-----RAPKDETEYV-TYS 210 (299)
T ss_pred HHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHC-----CCCCCCCCCC-EEE
T ss_conf 8722642687661689999999999998860589875157999999997054449876222-----7984466770-120
Q ss_pred HHHHH-CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHH
Q ss_conf 65420-204666533789999999999983533799999999999999999980899979
Q gi|254780205|r 223 RLFSY-QTKLWLFILYGIFVLCFMVAFCLLTVNFFAWIGLLIALFLTIKRIIALDISCSK 281 (310)
Q Consensus 223 v~~G~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~i~~~~~~~~~ 281 (310)
T Consensus 211 kLfG~kka~~~~~~l~~~d~~t~~~--l~~~~s~~~v~~l~~~~~w~~~~~~~f~-k~pt 267 (299)
T PRK13592 211 KLFGYKKATRFIEVVTLLDILTNFA--LLWNISHVGVVVLVLNVIWMTVQFEQFI-KSPT 267 (299)
T ss_pred HHCCCCCCEEEEEHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCC
T ss_conf 2204566147772899999999999--9987788999999998999630188871-4964