HHsearch alignment for GI: 254780205 and conserved domain: TIGR00751

>TIGR00751 menA 1,4-dihydroxy-2-naphthoate octaprenyltransferase; InterPro: IPR004657 This membrane-associated enzyme converts 1,4-dihydroxy-2-naphthoic acid (DHNA) to demethylmenaquinone, a step in menaquinone biosynthesis. A key reaction in the biosynthesis of menaquinone involves the conversion of the soluble bicyclic naphthalenoid compound 1, 4-dihydroxy-2-naphthoic acid (DHNA) to the membrane-bound demethylmenaquinone .; GO: 0016740 transferase activity, 0009234 menaquinone biosynthetic process, 0016021 integral to membrane.
Probab=96.16  E-value=0.097  Score=29.78  Aligned_cols=224  Identities=15%  Similarity=0.116  Sum_probs=114.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCC-CCC-CCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCC---C--CCC---CCC
Q ss_conf             9999999999899999964138877843-423-43101001233210110013443100034555---4--444---432
Q gi|254780205|r   68 FIYIVGAIVTRGAACTWNDLVDHDIDSQ-VLR-TRSRPLPSGQCTRFQALVFAVLQFLISFVLLL---Q--FNP---FVI  137 (310)
Q Consensus        68 ~l~~~G~~~~r~ag~~~Nd~~D~diD~~-~~R-T~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~---~--ln~---~~~  137 (310)
T Consensus        33 ~~~~~~~~~~~~~~~~~~d~~d~~~g~d~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~~  112 (286)
T TIGR00751        33 LLALLTAGLLQILSNLANDYGDGVKGSDKDDRIGPLRGVGKGLITPKELKWALILSLALGALSGLALVGLAAPNLADLFW  112 (286)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999987531000233467775101001343332101278889999999999988778999875445788999


Q ss_pred             --CCHHHHHHHHHHCCCC-CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC-------HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             --1003565444311665-5554332001010014566301114575432-------02468888874210035799888
Q gi|254780205|r  138 --CVGFALLFISLLYPFS-KRFILCPQVVLGIGFAGGVFVGWGALHASFS-------WPAFFLCIGTIFWVVYFDTVYAH  207 (310)
Q Consensus       138 --~l~~~~~~~~~iYp~~-KR~t~~p~~~lG~~~~~~~l~g~~av~g~~~-------~~~~~L~~~~~~Wt~~~dtiYa~  207 (310)
T Consensus       113 ~~~~g~~~~~~~~~~~~g~~p~g~~g---~g-~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  188 (286)
T TIGR00751       113 FLGLGGLCIVGAWTYTGGSKPYGYAG---LG-DLSVLVFFGPLGVLGTWYLQAHTLDWAGLLPAVATGLLACAVLNINNL  188 (286)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCCC---CH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99987999998876521566444222---01-467777775566523455555433356776665544677777653211


Q ss_pred             HHHHHHCCCCCHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf             753100025720346654202-0466653378999999999998353379999999999999999998089997999999
Q gi|254780205|r  208 QDKKDDELIGVNSTARLFSYQ-TKLWLFILYGIFVLCFMVAFCLLTVNFFAWIGLLIALFLTIKRIIALDISCSKQCCSF  286 (310)
Q Consensus       208 ~D~edD~k~GikSlav~~G~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~i~~~~~~~~~~~~k~  286 (310)
T Consensus       189 ~d~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~p~  268 (286)
T TIGR00751       189 RDIPTDAKAGKNTLAVRLGDAKGRVYHCGLLAVAGVCLLLFALATPHSWWGWLFLLAAPLLLKAAGPVRCGRGPRELRPV  268 (286)
T ss_pred             HCCCCHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
T ss_conf             10220010241000011101334688999999999999999987678888999999888888654333204662357788


Q ss_pred             HHHHHHHHH
Q ss_conf             876459999
Q gi|254780205|r  287 FHSAGVVGI  295 (310)
Q Consensus       287 Fk~n~~~g~  295 (310)
T Consensus       269 ~~~~~~~~~  277 (286)
T TIGR00751       269 LEDTGLGAL  277 (286)
T ss_pred             HHHHHHHHH
T ss_conf             887789999