RPSBLAST alignment for GI: 254780205 and conserved domain: TIGR01475
>gnl|CDD|162380 TIGR01475, ubiA_other, putative 4-hydroxybenzoate polyprenyltransferase. A fairly deep split separates this polyprenyltransferase subfamily from the set of mitochondrial and proteobacterial 4-hydroxybenzoate polyprenyltransferases, described in TIGR01474. Protoheme IX farnesyltransferase (heme O synthase) (TIGR01473) is more distantly related. Because no species appears to have both this protein and a member of TIGR01474, it is likely that This model represents 4-hydroxybenzoate polyprenyltransferase, a critical enzyme of ubiquinone biosynthesis, in the Archaea, Gram-positive bacteria, Aquifex aeolicus, the Chlamydias, etc. Length = 282
Score = 97.0 bits (242), Expect = 5e-21
Identities = 68/248 (27%), Positives = 116/248 (46%), Gaps = 4/248 (1%)
Query: 64 FWYLFIYIVGAIVTRGAACTWNDLVDHDIDSQVLRTRSRPLPSGQCTRFQALVFAVLQFL 123
L + ++ A+ R AA +N ++D ID++ RT++RPL SG ++ +A +L
Sbjct: 35 LKTLILILIAAVSARTAAMAFNRIIDRAIDARNPRTKNRPLVSGLISKKEARTMIILSLA 94
Query: 124 ISFVLLLQFNPFVICVGFALLFISLLYPFSKRFILCPQVVLGIGFAGGVFVGWGALHASF 183
+ NP + +L + ++YP++KRF VLG + GW A+ +
Sbjct: 95 LFLSASYFLNPLAFILSPLVLLVLIIYPYTKRFTFLCHYVLGSTYGLAPLAGWVAVIGTI 154
Query: 184 SWP--AFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQTKLWLFILYGIFV 241
S+ A+ L IG FW+ FD +YA QD + D G++S F + L + L +
Sbjct: 155 SFFLVAWLLGIGVGFWIAGFDLIYAIQDYEFDRKNGLHSIPARFGIKAALKIASLSHVIT 214
Query: 242 LCFMVAFCLLTVNFFAWI--GLLIALFLTIKRIIALDISCSKQCCSFFHSAGVVGILILI 299
++ N + + +LI L L + I SK +FF++ G + I LI
Sbjct: 215 FILLLLVGFYVGNGYIALLALILIGLILAYEHYIVDPGDQSKIQRAFFYANGFLSITFLI 274
Query: 300 CLIISLFL 307
+II + L
Sbjct: 275 GVIIDVLL 282