HHsearch alignment for GI: 254780206 and conserved domain: CHL00194

Probab=96.23  E-value=0.13  Score=31.67  Aligned_cols=112  Identities=21%  Similarity=0.163  Sum_probs=64.6

Q ss_pred             CEEEEECCCHHH-HHHHHHHHHCCCCCEEEEECCCHHHHH-----CCEEEECCCCCHHHHHHHHHHHCCCEEEE-C---C
Q ss_conf             958998865889-999999985899678999549835751-----17055128789899999998718979999-7---9
Q gi|254780206|r    1 MRVLLIGSGGRE-HALAWKIAQSPLLSELWSIPGNPGIAQ-----HAQCVAIDIQNHSAIIHFCQEKHIDLVVV-G---P   70 (424)
Q Consensus         1 MkILviGsGgrE-hAl~~~l~~s~~~~~v~~~pgN~g~~~-----~~~~~~i~~~d~~~i~~~a~~~~iDlviv-g---p   70 (424)
T Consensus         1 M~ILV~GATG~lGr~vVr~Ll~~G~--~Vr~lvRnp~ka~~l~~~Gve~v~gDl~dpesl~~Al--~GvdaVi~~~~~~~   76 (319)
T CHL00194          1 MSLLVIGATGTLGRQIVRRALDEGY--QVKCLVRNLRKAAFLKEWGAELVYGDLSLPETIPPAL--EGITAIIDASTSRP   76 (319)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC--CEEEEECCHHHHHHHHHCCCEEEEECCCCHHHHHHHH--CCCCEEEEECCCCC
T ss_conf             9799989985899999999996889--0899957867632342159679994278877899996--59967999456677


Q ss_pred             CHHH---------HHHHHHHHHHCCCCEE------ECCHH-HHHHHHCCHHHHHHHHHHHHH
Q ss_conf             5578---------7489989860588067------01066-655520102357888765310
Q gi|254780206|r   71 ELPL---------VNGISDALNAAGFKVF------GPSQR-AAKLESSKSFAKKFCTKYGIP  116 (424)
Q Consensus        71 E~pL---------~~gi~d~l~~~gi~v~------Gp~~~-aa~le~sK~~~K~~l~~~gIP  116 (424)
T Consensus        77 ~~~~~~~~vd~~g~~~li~AAk~aGVkr~V~lS~lga~~~~~~p~~~~K~~~E~~L~~Sgl~  138 (319)
T CHL00194         77 SDLNNAYQIDLEGKLALIEAAKAAKVKRFIFFSILNAEQYPQVPLMKIKSDIEEKLKQSGIN  138 (319)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
T ss_conf             88620889889889999999998499889996135666688756778799999999867998