HHsearch alignment for GI: 254780206 and conserved domain: COG1091
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane].
Probab=96.44 E-value=0.027 Score=36.60 Aligned_cols=135 Identities=16% Similarity=0.254 Sum_probs=66.6
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCC-CCEEEEECCCHHHHHCCEEEECCCCCHHHHHHHHHHHCCCEEEEC--------CC
Q ss_conf 958998865889999999985899-678999549835751170551287898999999987189799997--------95
Q gi|254780206|r 1 MRVLLIGSGGREHALAWKIAQSPL-LSELWSIPGNPGIAQHAQCVAIDIQNHSAIIHFCQEKHIDLVVVG--------PE 71 (424)
Q Consensus 1 MkILviGsGgrEhAl~~~l~~s~~-~~~v~~~pgN~g~~~~~~~~~i~~~d~~~i~~~a~~~~iDlvivg--------pE 71 (424)
T Consensus 1 M~iLi~G~~Gq---LG~~L~~~l~~~~~v~a~~----------~~~~Ditd~~~v~~~i~~~~PDvVIn~AAyt~vD~aE 67 (281)
T COG1091 1 MKILITGANGQ---LGTELRRALPGEFEVIATD----------RAELDITDPDAVLEVIRETRPDVVINAAAYTAVDKAE 67 (281)
T ss_pred CCEEEECCCCH---HHHHHHHHHCCCCEEEECC----------CCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCC
T ss_conf 95899769876---7999999717784399515----------7655556858999999861999899873203654133
Q ss_pred H-HH----H-----HHHHHHHHHCCCCEEECCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCC-CCEE
Q ss_conf 5-78----7-----4899898605880670106665552010235788876531011112234401111121012-4202
Q gi|254780206|r 72 L-PL----V-----NGISDALNAAGFKVFGPSQRAAKLESSKSFAKKFCTKYGIPTATYQHFSDPMKAKQYVQNK-SMPI 140 (424)
Q Consensus 72 ~-pL----~-----~gi~d~l~~~gi~v~Gp~~~aa~le~sK~~~K~~l~~~gIPt~~~~~~~~~~ea~~~~~~~-g~Pv 140 (424)
T Consensus 68 ~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhiSTDyV-FDG~~---~~~Y~E~D~~~P~nvYG~sKl~GE~~v~~~~~~~~ 143 (281)
T COG1091 68 SEPELAFAVNATGAENLARAAAEVGARLVHISTDYV-FDGEK---GGPYKETDTPNPLNVYGRSKLAGEEAVRAAGPRHL 143 (281)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCEE-ECCCC---CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEE
T ss_conf 898997776779999999999971976999634457-43898---98887789999702454778978999997399879
Q ss_pred EEEECCCCCCCC
Q ss_conf 563046534300
Q gi|254780206|r 141 VVKADGLCAGKG 152 (424)
Q Consensus 141 VVKp~~~agGkG 152 (424)
T Consensus 144 I~Rtswv~g~~g 155 (281)
T COG1091 144 ILRTSWVYGEYG 155 (281)
T ss_pred EEEEEEEECCCC
T ss_conf 998565545888