HHsearch alignment for GI: 254780206 and conserved domain: COG1181

>COG1181 DdlA D-alanine-D-alanine ligase and related ATP-grasp enzymes [Cell envelope biogenesis, outer membrane].

Probab=94.17  E-value=0.054  Score=34.38  Aligned_cols=97  Identities=18%  Similarity=0.113  Sum_probs=66.5

Q ss_pred             HHHCCHHHHHHHHHHHHHCCCCCCCCCCH-HHHHHHHCCCCEEEEEECCCCCCCCCCCHHH----HHHHHHHHHHHHCCC
Q ss_conf             52010235788876531011112234401-1111210124202563046534300023235----677888788751445
Q gi|254780206|r   99 LESSKSFAKKFCTKYGIPTATYQHFSDPM-KAKQYVQNKSMPIVVKADGLCAGKGVVVAAT----VDEATSAIDRCFQQI  173 (424)
Q Consensus        99 le~sK~~~K~~l~~~gIPt~~~~~~~~~~-ea~~~~~~~g~PvVVKp~~~agGkGV~i~~~----~~e~~~~~~~~~~~~  173 (424)
T Consensus        48 ~~~~~~~~~~~~~~~~vvfp~lhG~~gEDg~iqg~le~~giPyvg~gv~~Sa~~mdk~~~K~~~~~~g~~~a~~~~~~~~  127 (317)
T COG1181          48 WMLDKEVTKRVLQKADVVFPVLHGPYGEDGTIQGLLELLGIPYVGKGVLASAGAMDKIVTKRLFKAEGLPVAPYVALTRD  127 (317)
T ss_pred             EEECCCHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHCCCEEECCHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHCC
T ss_conf             78503101222026987787155888887069999997099876076445332350999988998678651235675334


Q ss_pred             C-HHHHHHHHHHCCCCCEEEECC
Q ss_conf             3-177788775205752344215
Q gi|254780206|r  174 N-STVIIEEYLEGFEVSFFALCD  195 (424)
Q Consensus       174 ~-~~VliEefl~G~E~Sv~~i~d  195 (424)
T Consensus       128 ~~~~~~~e~~~~~l~~p~~Vkp~  150 (317)
T COG1181         128 EYSSVIVEEVEEGLGFPLFVKPA  150 (317)
T ss_pred             CCHHHHHHHHHCCCCCCEEEECC
T ss_conf             52047888774146887899858