HHsearch alignment for GI: 254780206 and conserved domain: PRK01372

>PRK01372 ddl D-alanine--D-alanine ligase; Reviewed.
Probab=99.96  E-value=9.6e-28  Score=220.49  Aligned_cols=275  Identities=21%  Similarity=0.253  Sum_probs=191.8

Q ss_pred             CEEEEECCC-HHHHH--------HHHHHHHCCCCCEEEEECCCHHHHHCCEEEECCCCCHHHHHHHHHHHCCCEEEEC--
Q ss_conf             958998865-88999--------9999985899678999549835751170551287898999999987189799997--
Q gi|254780206|r    1 MRVLLIGSG-GREHA--------LAWKIAQSPLLSELWSIPGNPGIAQHAQCVAIDIQNHSAIIHFCQEKHIDLVVVG--   69 (424)
Q Consensus         1 MkILviGsG-grEhA--------l~~~l~~s~~~~~v~~~pgN~g~~~~~~~~~i~~~d~~~i~~~a~~~~iDlvivg--   69 (424)
T Consensus         5 ~kI~vl~GG~S~E~eVSl~S~~~v~~aL~~~~y--~v~---------------~id~~~--~~~~~l~~~~~D~vf~~lH   65 (304)
T PRK01372          5 GKVAVLMGGTSAEREVSLNSGAAVLAALREAGY--DAH---------------PIDPGE--DPAAELKELGFDRVFNALH   65 (304)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCC--EEE---------------EECCCC--CHHHHHHHCCCCEEEEECC
T ss_conf             718999367871289999999999998837599--799---------------982896--4677875339999999068


Q ss_pred             ---CCHHHHHHHHHHHHHCCCCEEECCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEEEEECC
Q ss_conf             ---95578748998986058806701066655520102357888765310111122344011111210124202563046
Q gi|254780206|r   70 ---PELPLVNGISDALNAAGFKVFGPSQRAAKLESSKSFAKKFCTKYGIPTATYQHFSDPMKAKQYVQNKSMPIVVKADG  146 (424)
Q Consensus        70 ---pE~pL~~gi~d~l~~~gi~v~Gp~~~aa~le~sK~~~K~~l~~~gIPt~~~~~~~~~~ea~~~~~~~g~PvVVKp~~  146 (424)
T Consensus        66 G~~GEDG~---iQglLe~~~IPYtGs~~~asal~mDK~~tK~i~~~~gI~tp~~~~~~~~~~~~~~~~~l~~P~iVKP~~  142 (304)
T PRK01372         66 GRGGEDGT---IQGLLELLGIPYTGSGVLASALAMDKLRTKLVWQAAGLPTAPWVVLTRAEDLLAAIDKLGLPLVVKPAR  142 (304)
T ss_pred             CCCCCCHH---HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCEEEEECC
T ss_conf             99985649---999999859983579989987765389999999986999898499865313999987618987997668


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCC
Q ss_conf             534300023235677888788751445317778877520575234421577631035200--011135665444443443
Q gi|254780206|r  147 LCAGKGVVVAATVDEATSAIDRCFQQINSTVIIEEYLEGFEVSFFALCDGKTAIPFTTAR--DHKRIHDGDIGPNTGGMG  224 (424)
Q Consensus       147 ~agGkGV~i~~~~~e~~~~~~~~~~~~~~~VliEefl~G~E~Sv~~i~dG~~~~~l~~~~--dyKr~~~~d~GpnTGGMG  224 (424)
T Consensus       143 ~GSSiGv~~V~~~~el~~ai~~a~~-~~~~vLvE~~I~GrEitv~Vl--g~~~--lp~~eI~~~~~fyDy~aKY~~~~s~  217 (304)
T PRK01372        143 EGSSVGVTKVKEADELPAALELAFK-YDDEVLVEKYIKGRELTVAVL--GGKA--LPVIRIVPPGEFYDYEAKYLAGDTQ  217 (304)
T ss_pred             CCCCCCEEEECCHHHHHHHHHHHHH-CCCCCEEEEEECCEEEEEEEE--CCCC--CCEEEEECCCCCCCHHHCCCCCCCC
T ss_conf             8866653896698899999999874-488625450256569999998--9977--7538994599875776612557741


Q ss_pred             EEECCCCCCCCCCEEEECCHHHHHHHHHHHCCCEEEEEEEEEEEEECCE-EEEEEEEEEECCCCCEEEEECCC----CCC
Q ss_conf             0000123443222010000089999986204623566445448985570-48999886514775104433265----441
Q gi|254780206|r  225 ACSPALGMSQELYSTVIQKIILPTIEGMQKEQNPFQGVLFAGLMITEQG-PYLIEYNVRFGDPECQAMMMRLE----SDI  299 (424)
Q Consensus       225 a~~p~~~~~~~~~~~i~~~i~~~~~~~l~~~~~~y~G~l~~~~m~t~~g-p~viE~N~R~GDPE~q~ilp~L~----~dl  299 (424)
T Consensus       218 ~~~Pa~-l~~~~~----~~i~~~a~~~~~aLg~--~g~aRvDf~~~~~g~~~~lEiNt~PG-mT~~Sl~P~~a~~~G~s~  289 (304)
T PRK01372        218 YLCPAG-LPAELE----AELQALALRAYKALGC--RGWGRVDFMLDEDGKPYLLEVNTSPG-MTSHSLVPMAARAAGISF  289 (304)
T ss_pred             EECCCC-CCHHHH----HHHHHHHHHHHHHHCC--CCEEEEEEEEECCCCEEEEEECCCCC-CCCCCHHHHHHHHCCCCH
T ss_conf             100689-999999----9999999999998499--73698899990799789998339999-874158999999819999


Q ss_pred             HHHHHHHHHCC
Q ss_conf             15666542013
Q gi|254780206|r  300 LEILNSCVHGN  310 (424)
Q Consensus       300 ~~il~~~~~g~  310 (424)
T Consensus       290 ~~li~~ii~~A  300 (304)
T PRK01372        290 SELVVWILEDA  300 (304)
T ss_pred             HHHHHHHHHHH
T ss_conf             99999999999