HHsearch alignment for GI: 254780206 and conserved domain: PRK01390
>PRK01390 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.
Probab=93.17 E-value=0.34 Score=28.65 Aligned_cols=84 Identities=26% Similarity=0.377 Sum_probs=49.1
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHCCEEEECCCCCHHHHHHHHHHHCCCEEEECCCHHHHHH----
Q ss_conf 5899886588999999998589967899954983575117055128789899999998718979999795578748----
Q gi|254780206|r 2 RVLLIGSGGREHALAWKIAQSPLLSELWSIPGNPGIAQHAQCVAIDIQNHSAIIHFCQEKHIDLVVVGPELPLVNG---- 77 (424)
Q Consensus 2 kILviGsGgrEhAl~~~l~~s~~~~~v~~~pgN~g~~~~~~~~~i~~~d~~~i~~~a~~~~iDlvivgpE~pL~~g---- 77 (424)
T Consensus 11 ~v~v~GlG~sG~s~a~~L~~~G--~~V~~~D~~~~~~~~~~~~g~~~~~~~~----~~~~~~~~iV~SPGIp~~~p~~~~ 84 (457)
T PRK01390 11 TVALFGLGGSGLATARALKAGG--AEVIAWDDNPDSVAKAAAAGIATADLRT----ADWSQFAALVLSPGVPLTHPKPHW 84 (457)
T ss_pred EEEEEEECHHHHHHHHHHHHCC--CEEEEEECCCHHHHHHHHCCCCCCCCCC----CCCCCCCEEEECCCCCCCCCCCHH
T ss_conf 8999943699999999999789--9799993992066899875983145541----232038789999988865667319
Q ss_pred HHHHHHHCCCCEEE
Q ss_conf 99898605880670
Q gi|254780206|r 78 ISDALNAAGFKVFG 91 (424)
Q Consensus 78 i~d~l~~~gi~v~G 91 (424)
T Consensus 85 ~v~~a~~~gi~v~s 98 (457)
T PRK01390 85 TVDLARAAGVEVIG 98 (457)
T ss_pred HHHHHHHCCCEEEE
T ss_conf 99999985991860