HHsearch alignment for GI: 254780206 and conserved domain: PRK03806
>PRK03806 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.
Probab=91.01 E-value=1.3 Score=24.35 Aligned_cols=85 Identities=18% Similarity=0.182 Sum_probs=49.3
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCH---HHHHCCEEEECCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHH
Q ss_conf 5899886588999999998589967899954983---5751170551287898999999987189799997955787489
Q gi|254780206|r 2 RVLLIGSGGREHALAWKIAQSPLLSELWSIPGNP---GIAQHAQCVAIDIQNHSAIIHFCQEKHIDLVVVGPELPLVNGI 78 (424)
Q Consensus 2 kILviGsGgrEhAl~~~l~~s~~~~~v~~~pgN~---g~~~~~~~~~i~~~d~~~i~~~a~~~~iDlvivgpE~pL~~gi 78 (424)
T Consensus 8 ~v~V~GlG~sG~s~~~~L~~~G--~~v~~~D~~~~~~~~~~l~~~~~~~~g~~~--~~~--~~~~d~vV~SPGI~~~~p~ 81 (438)
T PRK03806 8 NVVIIGLGLTGLSCVDFFLARG--VTPRVMDTRMTPPGLDKLPENVERHTGSLN--DEW--LLAADLIVASPGIALAHPS 81 (438)
T ss_pred EEEEEEECHHHHHHHHHHHHCC--CEEEEEECCCCCHHHHHHHCCCCEEECCCC--HHH--HCCCCEEEECCCCCCCCHH
T ss_conf 8999945788899999999789--969999899990057886458846657779--668--0679999989978998989
Q ss_pred HHHHHHCCCCEEEC
Q ss_conf 98986058806701
Q gi|254780206|r 79 SDALNAAGFKVFGP 92 (424)
Q Consensus 79 ~d~l~~~gi~v~Gp 92 (424)
T Consensus 82 ~~~a~~~~i~i~se 95 (438)
T PRK03806 82 LSAAADAGVEIVGD 95 (438)
T ss_pred HHHHHHCCCCEEEH
T ss_conf 99999879947769