HHsearch alignment for GI: 254780206 and conserved domain: PRK04690

>PRK04690 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.
Probab=91.04  E-value=0.5  Score=27.44  Aligned_cols=83  Identities=22%  Similarity=0.232  Sum_probs=45.4

Q ss_pred             EEEEECCC--HHHHHHHHHHHHCCCCCEEEEECCCHHH----HHCCEE-EECCCC-CHHHHHHHHHHHCCCEEEECCCHH
Q ss_conf             58998865--8899999999858996789995498357----511705-512878-989999999871897999979557
Q gi|254780206|r    2 RVLLIGSG--GREHALAWKIAQSPLLSELWSIPGNPGI----AQHAQC-VAIDIQ-NHSAIIHFCQEKHIDLVVVGPELP   73 (424)
Q Consensus         2 kILviGsG--grEhAl~~~l~~s~~~~~v~~~pgN~g~----~~~~~~-~~i~~~-d~~~i~~~a~~~~iDlvivgpE~p   73 (424)
T Consensus        10 kv~V~GlG~sG~--aaa~~L~~~g~~~~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------l~~~d~vv~SPGi~   80 (468)
T PRK04690         10 RVALWGWGREGR--AAYRALRAQLPAQPL-TVFCNAEEVREVGALADAALLVETEASAQR------LAAFEVVVKSPGIS   80 (468)
T ss_pred             EEEEEEECHHHH--HHHHHHHHCCCEEEE-EECCCCCCCHHHHHHCCCCCEEECCCCHHH------HHCCCEEEECCCCC
T ss_conf             799983478799--999999966990499-972883246466762045756746778557------61488999899579


Q ss_pred             HHHHHHHHHHHCCCCEEECC
Q ss_conf             87489989860588067010
Q gi|254780206|r   74 LVNGISDALNAAGFKVFGPS   93 (424)
Q Consensus        74 L~~gi~d~l~~~gi~v~Gp~   93 (424)
T Consensus        81 ~~~p~~~~a~~~~i~i~~ei  100 (468)
T PRK04690         81 PYRPEALAAAAQGTPFIGGT  100 (468)
T ss_pred             CCCHHHHHHHHCCCCEEEHH
T ss_conf             86899999998799488689