HHsearch alignment for GI: 254780206 and conserved domain: PRK05294
>PRK05294 carB carbamoyl phosphate synthase large subunit; Reviewed.
Probab=99.97 E-value=3.4e-29 Score=231.00 Aligned_cols=381 Identities=18% Similarity=0.250 Sum_probs=254.6
Q ss_pred EEEEECCC------HHH------HHHHHHHHHCCCCCEEEEECCCHHHHH----CCEEEECCCCCHHHHHHHHHHHCCCE
Q ss_conf 58998865------889------999999985899678999549835751----17055128789899999998718979
Q gi|254780206|r 2 RVLLIGSG------GRE------HALAWKIAQSPLLSELWSIPGNPGIAQ----HAQCVAIDIQNHSAIIHFCQEKHIDL 65 (424)
Q Consensus 2 kILviGsG------grE------hAl~~~l~~s~~~~~v~~~pgN~g~~~----~~~~~~i~~~d~~~i~~~a~~~~iDl 65 (424)
T Consensus 9 kvLviGsGp~~IGqa~EfDysg~qa-~~al~e~g~--~vilvN~NpaTv~Td~~~ad~vY~ePlt~e~v~~Ii~~E~Pd~ 85 (1063)
T PRK05294 9 KILIIGSGPIVIGQACEFDYSGTQA-CKALREEGY--RVVLVNSNPATIMTDPEMADATYIEPITPEFVEKIIEKERPDA 85 (1063)
T ss_pred EEEEECCCCCHHCCHHHHHHHHHHH-HHHHHHCCC--EEEEECCCCCHHCCCCCCCCEEEECCCCHHHHHHHHHHHCCCE
T ss_conf 8999898825103723326569999-999998699--8999879854410787766437872798999999999759997
Q ss_pred EEE--CCCHHHHH--HHHH--HHHHCCCCEEECCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCE
Q ss_conf 999--79557874--8998--98605880670106665552010235788876531011112234401111121012420
Q gi|254780206|r 66 VVV--GPELPLVN--GISD--ALNAAGFKVFGPSQRAAKLESSKSFAKKFCTKYGIPTATYQHFSDPMKAKQYVQNKSMP 139 (424)
Q Consensus 66 viv--gpE~pL~~--gi~d--~l~~~gi~v~Gp~~~aa~le~sK~~~K~~l~~~gIPt~~~~~~~~~~ea~~~~~~~g~P 139 (424)
T Consensus 86 il~~~GGQtaLnla~~L~~~GiL~~~~v~lLGt~~~~I~~aedR~~F~~~l~~i~~p~~~s~~~~s~~ea~~~a~~igyP 165 (1063)
T PRK05294 86 ILPTMGGQTALNLALELAESGVLEKYGVELIGAKLEAIDKAEDRELFKEAMKKIGLPVPRSGIAHTMEEALEVAEEIGYP 165 (1063)
T ss_pred EEECCCCHHHHHHHHHHHHCCCHHHCCCEEECCCHHHHHHHHCHHHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHCCCC
T ss_conf 88667780599999999975967764972756999999977789999999997699999725309999999999865998
Q ss_pred EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHCC-CCCEEEECCCCC-CCCCCCCCCCCCCCCCCC
Q ss_conf 2563046534300023235677888788751445-3177788775205-752344215776-310352000111356654
Q gi|254780206|r 140 IVVKADGLCAGKGVVVAATVDEATSAIDRCFQQI-NSTVIIEEYLEGF-EVSFFALCDGKT-AIPFTTARDHKRIHDGDI 216 (424)
Q Consensus 140 vVVKp~~~agGkGV~i~~~~~e~~~~~~~~~~~~-~~~VliEefl~G~-E~Sv~~i~dG~~-~~~l~~~~dyKr~~~~d~ 216 (424)
T Consensus 166 vivRps~~LGG~g~~i~~n~~eL~~~~~~~~~~S~~~qvLie~sl~gwkEie~ev~rD~~~n~i~v~~mEnid-----p~ 240 (1063)
T PRK05294 166 VIIRPSFTLGGTGGGIAYNREELEEIVERGLDLSPTTEVLIEESLLGWKEYEMEVMRDKADNCIIVCSIENID-----PM 240 (1063)
T ss_pred EEEEECCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCEEEEHHCCCCEEEEEEEEEECCCCEEEEEEECCCC-----CC
T ss_conf 8998442167876404349999999999999619998689661117988999999981899989995411354-----56
Q ss_pred CCCCCCCCEEECCCCCCCCCCEEEECCHHHHHHHHHHHCCCEEEEEEEEEEEEEC--CEEEEEEEEEEECCCCCEEEEEC
Q ss_conf 4444344300001234432220100000899999862046235664454489855--70489998865147751044332
Q gi|254780206|r 217 GPNTGGMGACSPALGMSQELYSTVIQKIILPTIEGMQKEQNPFQGVLFAGLMITE--QGPYLIEYNVRFGDPECQAMMMR 294 (424)
Q Consensus 217 GpnTGGMGa~~p~~~~~~~~~~~i~~~i~~~~~~~l~~~~~~y~G~l~~~~m~t~--~gp~viE~N~R~GDPE~q~ilp~ 294 (424)
T Consensus 241 GIHtGDSi~vaP~qTL~d~e~q~l-R~~a~kI~~~L---~iv-~G~~NiQfA~~p~~~~~~VIEvNPR~SRs--salaSK 313 (1063)
T PRK05294 241 GVHTGDSITVAPAQTLTDKEYQML-RDASIAILREI---GVE-TGGSNVQFAVNPKDGRYVVIEMNPRVSRS--SALASK 313 (1063)
T ss_pred CCCCCCCCEECCCCCCCHHHHHHH-HHHHHHHHHHC---CCC-CCCEEEEEEECCCCCCEEEEECCCCCCCC--HHHHHH
T ss_conf 456667253568865898999999-99999999982---957-36447999874899848999637750010--688888
Q ss_pred CCC-CCHHHHHHHHHCC-CCCCCCCCCCCCEEEEEECCCCCCC-CCC-CCCCCCCCCCCCCCCEEEEEEEEEECCEEEEC
Q ss_conf 654-4115666542013-3332123444420675422544668-775-79762487666898689983358778879981
Q gi|254780206|r 295 LES-DILEILNSCVHGN-LHNTHINWKAEYALTVVVATKGYPE-EYP-HGTIISKIPQNTGTTQLFHAGTAIVNNNLTAN 370 (424)
Q Consensus 295 L~~-dl~~il~~~~~g~-L~~~~~~~~~~~~v~Vvlas~GYP~-~~~-kg~~I~~l~~~~~~~~ifhagt~~~~g~l~t~ 370 (424)
T Consensus 314 aTGyPiA~vaaklalG~~L~ei~n~vT~~t~-----A~fE-P~ldyv~vK~p~~~f~kf~~~~--~~Lg~-----~mks- 379 (1063)
T PRK05294 314 ATGYPIAKVAAKLAVGYTLDEIKNDITGKTP-----ASFE-PSIDYVVTKIPRFAFEKFPGAD--RRLTT-----QMKS- 379 (1063)
T ss_pred HHCCCHHHHHHHHHHCCCHHHHCCCCCCCCC-----CCCC-CCCCEEEEEECCCCCCCCCCCC--HHHCC-----CCCC-
T ss_conf 7388789999998717975783676446631-----4447-7566599970477710035854--43243-----0113-
Q ss_pred CCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHH
Q ss_conf 880799999628989999999999852589995753517898875
Q gi|254780206|r 371 GGRVLSATALGKTITESRELAYHMVENIDWKHGYWREDIGLQKKE 415 (424)
Q Consensus 371 GGRVL~vv~~g~~l~eA~~~ay~~i~~I~~~g~~yR~DIG~~~~~ 415 (424)
T Consensus 380 ---~Gevm~igr~feea~~KAirSle-~~~~gl~~~~~~~~eel~ 420 (1063)
T PRK05294 380 ---VGEVMAIGRTFEESLQKALRSLE-IGLTGLDEKEDLALEEIR 420 (1063)
T ss_pred ---CCHHHHHCCHHHHHHHHHHHHHC-CCCCCCCCCCCCCHHHHH
T ss_conf ---41022222328999999998442-586677777778999999