HHsearch alignment for GI: 254780206 and conserved domain: PRK09009
>PRK09009 C factor cell-cell signaling protein; Provisional.
Probab=92.65 E-value=0.93 Score=25.48 Aligned_cols=67 Identities=16% Similarity=0.358 Sum_probs=42.0
Q ss_pred CEEEEECCC-HHHHHHHHHHHHCCCCCEEEEECC--CHHH-HHCCEEEECCCCCHHHHHHHHHHH-CCCEEE
Q ss_conf 958998865-889999999985899678999549--8357-511705512878989999999871-897999
Q gi|254780206|r 1 MRVLLIGSG-GREHALAWKIAQSPLLSELWSIPG--NPGI-AQHAQCVAIDIQNHSAIIHFCQEK-HIDLVV 67 (424)
Q Consensus 1 MkILviGsG-grEhAl~~~l~~s~~~~~v~~~pg--N~g~-~~~~~~~~i~~~d~~~i~~~a~~~-~iDlvi 67 (424)
T Consensus 1 mnVLITGas~GIG~aia~~l~~~~~~~~v~~~~~~~~~~~~~~~v~~~~~Dvt~~~~i~~~~~~~~~iD~li 72 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLETYPDATVHATYRHHKPDFRHDNVQWHALDVTDEAEIKQLSEQFTQLDWLI 72 (235)
T ss_pred CEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEE
T ss_conf 979997556399999999998569980999973776544457983899874799999999998708778999