HHsearch alignment for GI: 254780206 and conserved domain: PRK12767
>PRK12767 carbamoyl phosphate synthase-like protein; Provisional.
Probab=100.00 E-value=5.6e-35 Score=272.77 Aligned_cols=297 Identities=22% Similarity=0.319 Sum_probs=220.2
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCEEEEE---CCCHHHHHCCEEEECC-CCC---HHHHHHHHHHHCCCEEEECCC--
Q ss_conf 9589988658899999999858996789995---4983575117055128-789---899999998718979999795--
Q gi|254780206|r 1 MRVLLIGSGGREHALAWKIAQSPLLSELWSI---PGNPGIAQHAQCVAID-IQN---HSAIIHFCQEKHIDLVVVGPE-- 71 (424)
Q Consensus 1 MkILviGsGgrEhAl~~~l~~s~~~~~v~~~---pgN~g~~~~~~~~~i~-~~d---~~~i~~~a~~~~iDlvivgpE-- 71 (424)
T Consensus 2 ~nILvt~~G~~~~-ii~~lk~~~~~~~Vi~~D~~~~a~~~~~aD~~y~~P~~~d~~y~~~ll~i~~~~~id~iiP~~d~E 80 (325)
T PRK12767 2 MNILVTSAGRRVQ-LVKALKKSLLGGKVIGADISPLAPALYFADKFYVVPKVTDPNYIDALLDICKKENIDALIPLIDPE 80 (325)
T ss_pred CEEEEECCCCHHH-HHHHHHHCCCCCEEEEECCCCCCCCHHHCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEECCCHH
T ss_conf 4899986786899-999999769985999968998995344548899878889878999999999987999999778502
Q ss_pred HHHHHHHHHHHHHCCCCEEECCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHH-HHHCCCCEEEEEECCCCCC
Q ss_conf 578748998986058806701066655520102357888765310111122344011111-2101242025630465343
Q gi|254780206|r 72 LPLVNGISDALNAAGFKVFGPSQRAAKLESSKSFAKKFCTKYGIPTATYQHFSDPMKAKQ-YVQNKSMPIVVKADGLCAG 150 (424)
Q Consensus 72 ~pL~~gi~d~l~~~gi~v~Gp~~~aa~le~sK~~~K~~l~~~gIPt~~~~~~~~~~ea~~-~~~~~g~PvVVKp~~~agG 150 (424)
T Consensus 81 l~~la~~~~~l~~~gi~v~~~~~e~i~~~~DK~~~~~~l~~~gip~P~t~~~~~~~~~~~~~~~~~~fP~vvKP~~g~gs 160 (325)
T PRK12767 81 LPLLAQHRDEFKEIGVKVLVSSKEVIEICNDKWLTYEFLKENGINTPKSYLPEDLEDLLKALAEELGFPLIVKPRDGSGS 160 (325)
T ss_pred HHHHHHHHHHHHHCCCEEECCCHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCC
T ss_conf 66899999999967998956979999985499999999997599989820558999999999865699669853567887
Q ss_pred CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEECCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC
Q ss_conf 00023235677888788751445317778877520575234421577-63103520001113566544444344300001
Q gi|254780206|r 151 KGVVVAATVDEATSAIDRCFQQINSTVIIEEYLEGFEVSFFALCDGK-TAIPFTTARDHKRIHDGDIGPNTGGMGACSPA 229 (424)
Q Consensus 151 kGV~i~~~~~e~~~~~~~~~~~~~~~VliEefl~G~E~Sv~~i~dG~-~~~~l~~~~dyKr~~~~d~GpnTGGMGa~~p~ 229 (424)
T Consensus 161 ~Gv~~i~~~~el~~~~~~-----~~~~ivqe~i~G~E~tvdv~~d~~g~~~~~~-~~--~r~~~------~~G~~--~~~ 224 (325)
T PRK12767 161 IGVFKVNNREELEFLLRY-----NPNLIIQEFIEGQEYTVDVLCDLNGEVISIV-PR--KRIEV------RAGET--SKG 224 (325)
T ss_pred CCEEEECCHHHHHHHHHH-----CCCEEEEECCCCCEEEEEEEEECCCCEEEEE-EE--EECCC------CCCCC--CCC
T ss_conf 754997999999999974-----8974987034898899999997899999999-98--73364------45786--775
Q ss_pred CCCCCCCCEEEECCHHHHHHHHHHHCCCEEEEEEEEEEEEECCEEEEEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHC
Q ss_conf 23443222010000089999986204623566445448985570489998865147751044332654411566654201
Q gi|254780206|r 230 LGMSQELYSTVIQKIILPTIEGMQKEQNPFQGVLFAGLMITEQGPYLIEYNVRFGDPECQAMMMRLESDILEILNSCVHG 309 (424)
Q Consensus 230 ~~~~~~~~~~i~~~i~~~~~~~l~~~~~~y~G~l~~~~m~t~~gp~viE~N~R~GDPE~q~ilp~L~~dl~~il~~~~~g 309 (424)
T Consensus 225 ~~~~~---~~l-~~~~~~i~~~l---~--~~G~~~vq~~~~~g~~~iiEiNPRf~g~--~~l~~~aG~n~p~~~~~~~lg 293 (325)
T PRK12767 225 VTVKN---PEL-FKLAERIAEKL---G--ARGPLNIQCFVVDGEPYLFEINPRFGGG--YPLRAMAGFNEPDILIRNLLG 293 (325)
T ss_pred EECCH---HHH-HHHHHHHHHHC---C--CCCEEEEEEEEECCEEEEEEEECCCCCC--HHHHHHHCCCHHHHHHHHHCC
T ss_conf 30579---999-99999999981---9--8545999999989969999997887864--673988398999999999849
Q ss_pred CCC-CCCCCCCCCCEEE
Q ss_conf 333-3212344442067
Q gi|254780206|r 310 NLH-NTHINWKAEYALT 325 (424)
Q Consensus 310 ~L~-~~~~~~~~~~~v~ 325 (424)
T Consensus 294 ~~~~~~~~~~~~g~~~~ 310 (325)
T PRK12767 294 GENIPIIGEYKEGLYMR 310 (325)
T ss_pred CCCCCCCCCCCCCEEEE
T ss_conf 99898755435782899