>TIGR00514 accC acetyl-CoA carboxylase, biotin carboxylase; InterPro: IPR004549 This family represents the biotin carboxylase subunit found usually as a component of acetyl-CoA carboxylase. Acetyl-CoA carboxylase (6.4.1.2 from EC) is a heterohexamer of biotin carboxyl carrier protein, biotin carboxylase (6.3.4.14 from EC), and two subunits of carboxyl transferase in a 2:2 complex. In the first step of long-chain fatty acid synthesis, biotin carboxylase catalyses the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-coA. Homologous domains are found in eukaryotic forms of acetyl-CoA carboxylase and in a number of other carboxylases (e.g. pyruvate carboxylase). In some systems, the biotin carboxyl carrier protein and this protein (biotin carboxylase) may be shared by different carboxyltransferases. However, this model is not intended to identify the biotin carboxylase domain of propionyl-coA carboxylase. The model should hit the full length of proteins, except for chloroplast transit peptides in plants. If it hits a domain only of a longer protein, there may be a problem with the identification.; GO: 0016874 ligase activity.

Probab=99.93 E-value=3.3e-24 Score=194.92 Aligned_cols=331 Identities=18% Similarity=0.272 Sum_probs=242.4 Q ss_pred CCCCCHHHHHHHHHHHCCCEEEEC----CCHHHHHHHHHHHHHCCCCEEECCHHHHHHHHCCHHHHHHHHHHHHHCCCC- Q ss_conf 287898999999987189799997----955787489989860588067010666555201023578887653101111- Q gi|254780206|r 46 IDIQNHSAIIHFCQEKHIDLVVVG----PELPLVNGISDALNAAGFKVFGPSQRAAKLESSKSFAKKFCTKYGIPTATY- 120 (424) Q Consensus 46 i~~~d~~~i~~~a~~~~iDlvivg----pE~pL~~gi~d~l~~~gi~v~Gp~~~aa~le~sK~~~K~~l~~~gIPt~~~- 120 (424) T Consensus 58 kSYL~IpnI~aAA~~tG~~AiHPGYGFLSEN---A~FAe~c~~~g~~FIGP~pe~Ir~MGDK~~A~~~mKkaGVP~VPGS 134 (451) T TIGR00514 58 KSYLNIPNIIAAAEITGADAIHPGYGFLSEN---ADFAEICEDHGITFIGPSPEAIRLMGDKVTAKETMKKAGVPVVPGS 134 (451) T ss_pred CCCCHHHHHHHHHHHCCCCEECCCCCHHHHH---HHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHCCCCEECCC T ss_conf 2441158899988774880762887734431---2478898738826667871201126886899999974887662388 Q ss_pred -C-CCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCC-----CHHHHHHHHHHCC-CCCEEE Q ss_conf -2-2344011111210124202563046534300023235677888788751445-----3177788775205-752344 Q gi|254780206|r 121 -Q-HFSDPMKAKQYVQNKSMPIVVKADGLCAGKGVVVAATVDEATSAIDRCFQQI-----NSTVIIEEYLEGF-EVSFFA 192 (424) Q Consensus 121 -~-~~~~~~ea~~~~~~~g~PvVVKp~~~agGkGV~i~~~~~e~~~~~~~~~~~~-----~~~VliEefl~G~-E~Sv~~ 192 (424) T Consensus 135 ~GP~~~~~~e~~~~A~~IGyPv~IKA~AGGGGRGmR~vR~~~El~~~~~~a~~EA~AAF~N~~VYiEKfienPRH~E~QV 214 (451) T TIGR00514 135 DGPLVEDEEEAVRIAKEIGYPVIIKATAGGGGRGMRVVREEDELVKLIKAARAEAAAAFNNDGVYIEKFIENPRHVEIQV 214 (451) T ss_pred CCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEE T ss_conf 88631027889999974789689996258997225886286899999999999997402879627863336994079998 Q ss_pred ECCC-CCCCCCCC----CC-CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEECCHHHHHHHHHHHCCCEEEEEEEEE Q ss_conf 2157-76310352----00-011135665444443443000012344322201000008999998620462356644544 Q gi|254780206|r 193 LCDG-KTAIPFTT----AR-DHKRIHDGDIGPNTGGMGACSPALGMSQELYSTVIQKIILPTIEGMQKEQNPFQGVLFAG 266 (424) Q Consensus 193 i~dG-~~~~~l~~----~~-dyKr~~~~d~GpnTGGMGa~~p~~~~~~~~~~~i~~~i~~~~~~~l~~~~~~y~G~l~~~ 266 (424) T Consensus 215 LAD~~GN~vyLgERDCSiQRR~QKllEE------------aPsP~Lt~ElR~~~G~----~Av~aA~~--iGY~GaGTvE 276 (451) T TIGR00514 215 LADKYGNVVYLGERDCSIQRRNQKLLEE------------APSPALTSELREKMGD----AAVKAAKS--IGYTGAGTVE 276 (451) T ss_pred EECCCCCEEEECCCCCCHHCCCCCEEEE------------CCCCCCCHHHHHHHHH----HHHHHHHH--CCCEECCEEE T ss_conf 7517888789712146200046544654------------6888778899999989----99999986--4980035168 Q ss_pred EEEECCE--EEEEEEEEEECCCCCEEEEECC-CCCCHHHHHHHHHCCCCCCCCCCCCC------CEEEEEECCCCCCCCC Q ss_conf 8985570--4899988651477510443326-54411566654201333321234444------2067542254466877 Q gi|254780206|r 267 LMITEQG--PYLIEYNVRFGDPECQAMMMRL-ESDILEILNSCVHGNLHNTHINWKAE------YALTVVVATKGYPEEY 337 (424) Q Consensus 267 ~m~t~~g--p~viE~N~R~GDPE~q~ilp~L-~~dl~~il~~~~~g~L~~~~~~~~~~------~~v~Vvlas~GYP~~~ 337 (424) T Consensus 277 FLld~~~~rFYFmEMNTRIQ-VEHP-VTEmvtGvDL~keQirvA~G~----~L~~kQe~v~~~GHaieCRINAE------ 344 (451) T TIGR00514 277 FLLDKNGQRFYFMEMNTRIQ-VEHP-VTEMVTGVDLIKEQIRVAAGE----KLSLKQEDVKLRGHAIECRINAE------ 344 (451) T ss_pred EEEECCCCEEEEEEECCEEE-EEEC-CEEEEECHHHHHHHHHHHCCC----CCCCCCCEEEEEEEEEEEEECCC------ T ss_conf 88625887357765176021-1103-201460025788899873789----56643114799988998651455------ Q ss_pred CCCCCCCCCCCCCCCCEEEEE--EE-EEECCEEEEC-------CCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCEECC Q ss_conf 579762487666898689983--35-8778879981-------8807999996289899999999998525899957535 Q gi|254780206|r 338 PHGTIISKIPQNTGTTQLFHA--GT-AIVNNNLTAN-------GGRVLSATALGKTITESRELAYHMVENIDWKHGYWRE 407 (424) Q Consensus 338 ~kg~~I~~l~~~~~~~~ifha--gt-~~~~g~l~t~-------GGRVL~vv~~g~~l~eA~~~ay~~i~~I~~~g~~yR~ 407 (424) T Consensus 345 ---DP~~~F~PsPG~i~~ylpPGG~gVR~DSh~Y~gY~iPPyYDSmIaKlI~~G~~R~~AI~rMKrAL~E~~I~G~--~T 419 (451) T TIGR00514 345 ---DPIKNFLPSPGRITSYLPPGGPGVRVDSHVYSGYTIPPYYDSMIAKLITYGKTREEAIARMKRALSEFIITGI--KT 419 (451) T ss_pred ---CCCCCCCCCCCCCCCCCCCCCCCEECCCEECCCCCCCCCCHHCCEEEEECCCCHHHHHHHHHHHHHHHEECCC--CC T ss_conf ---8787786888501554687975220100344878769840202012464058988999999887542220771--05 Q ss_pred HHHHHHH Q ss_conf 1789887 Q gi|254780206|r 408 DIGLQKK 414 (424) Q Consensus 408 DIG~~~~ 414 (424) T Consensus 420 tI~fH~~ 426 (451) T TIGR00514 420 TIPFHQR 426 (451) T ss_pred CHHHHHH T ss_conf 8468988

HHsearch alignment for GI: 254780206 and conserved domain: TIGR00514