HHsearch alignment for GI: 254780206 and conserved domain: TIGR02712
>TIGR02712 urea_carbox urea carboxylase; InterPro: IPR014084 Members of this family are ATP-dependent urea carboxylases, including characterised members from Oleomonas sagaranensis (alpha class Proteobacterium) and yeasts such as Saccharomyces cerevisiae (Baker's yeast). The allophanate hydrolase domain of the yeast enzyme is not included in this entry and is represented by an adjacent gene in Oleomonas sagaranensis. The fusion of urea carboxylase and allophanate hydrolase is designated urea amidolyase. The enzyme from O. sagaranensis was shown to be highly active on acetamide and formamide as well as urea..
Probab=99.90 E-value=8.3e-22 Score=177.58 Aligned_cols=367 Identities=16% Similarity=0.232 Sum_probs=255.1
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCCEE--EEECCC--HHHHHCCEEEE-------CCCCCHHHHHHHHHHHCCCEEEEC-
Q ss_conf 589988658899999999858996789--995498--35751170551-------287898999999987189799997-
Q gi|254780206|r 2 RVLLIGSGGREHALAWKIAQSPLLSEL--WSIPGN--PGIAQHAQCVA-------IDIQNHSAIIHFCQEKHIDLVVVG- 69 (424)
Q Consensus 2 kILviGsGgrEhAl~~~l~~s~~~~~v--~~~pgN--~g~~~~~~~~~-------i~~~d~~~i~~~a~~~~iDlvivg- 69 (424)
T Consensus 3 ~vLiANRGEIA~RiirTL~~l-gi~sVAvYS~aD~~s~HV~~AD~A~~Lg~~~A~esYL~~dkil~~Ak~tGA~AI~PGY 81 (1226)
T TIGR02712 3 TVLIANRGEIAVRIIRTLRKL-GIRSVAVYSDADRASQHVLDADEAVCLGGATAAESYLDIDKILAIAKKTGAQAIHPGY 81 (1226)
T ss_pred EEEEECCHHHHHHHHHHHHHC-CCCEEEEECCCCCCCCCHHHCCCEECCCCCCHHHHHCCHHHHHHHHHHCCCCEEECCC
T ss_conf 567764437999999998771-8637986321002157823605026058954132221478999999755893874588
Q ss_pred ---CCHHHHHHHHHHHHHCCCCEEECCHHHHHHHHCCHHHHHHHHHHHHH-CCCCCCCCCCHHHHHHHHCCCCEEEEEEC
Q ss_conf ---95578748998986058806701066655520102357888765310-11112234401111121012420256304
Q gi|254780206|r 70 ---PELPLVNGISDALNAAGFKVFGPSQRAAKLESSKSFAKKFCTKYGIP-TATYQHFSDPMKAKQYVQNKSMPIVVKAD 145 (424)
Q Consensus 70 ---pE~pL~~gi~d~l~~~gi~v~Gp~~~aa~le~sK~~~K~~l~~~gIP-t~~~~~~~~~~ea~~~~~~~g~PvVVKp~ 145 (424)
T Consensus 82 GFLSEN---A~FA~~C~~aGI~FvGPtpe~ir~fGLKHtAR~lA~~aGVPL~PGTgLL~sl~eA~~~A~~IGYPVMlKST 158 (1226)
T TIGR02712 82 GFLSEN---AAFAEACEAAGIVFVGPTPEQIRKFGLKHTARELAEAAGVPLLPGTGLLESLDEALEAAKEIGYPVMLKST 158 (1226)
T ss_pred CCCCCC---HHHHHHHHHCCCEEECCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 723578---77998998479578778706674438325689999966889888515587799999998646995479870
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHC--C---CCHHHHHHHHHH-CCCCCEEEECCCC-CCCCCCC------CCCCCCCC
Q ss_conf 65343000232356778887887514--4---531777887752-0575234421577-6310352------00011135
Q gi|254780206|r 146 GLCAGKGVVVAATVDEATSAIDRCFQ--Q---INSTVIIEEYLE-GFEVSFFALCDGK-TAIPFTT------ARDHKRIH 212 (424)
Q Consensus 146 ~~agGkGV~i~~~~~e~~~~~~~~~~--~---~~~~VliEefl~-G~E~Sv~~i~dG~-~~~~l~~------~~dyKr~~ 212 (424)
T Consensus 159 AGGGGIGl~~c~~~~eL~~aFe~Vkrlg~~~F~daGVFlErfv~~ARHvEVQifGDG~G~v~aLGeRDCSLQRRNQKVvE 238 (1226)
T TIGR02712 159 AGGGGIGLQKCDNAAELAEAFETVKRLGESFFGDAGVFLERFVENARHVEVQIFGDGKGKVVALGERDCSLQRRNQKVVE 238 (1226)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCEEE
T ss_conf 78765245111898999999999899886323635143403203784289987526973369971167544445665587
Q ss_pred CCCCCCCCCCCCEEECCCCCCCCCCEEEECCHHHHHHHHHHHCCCEEEEEEEEEEEEECC--EEEEEEEEEEE--CCCCC
Q ss_conf 665444443443000012344322201000008999998620462356644544898557--04899988651--47751
Q gi|254780206|r 213 DGDIGPNTGGMGACSPALGMSQELYSTVIQKIILPTIEGMQKEQNPFQGVLFAGLMITEQ--GPYLIEYNVRF--GDPEC 288 (424)
Q Consensus 213 ~~d~GpnTGGMGa~~p~~~~~~~~~~~i~~~i~~~~~~~l~~~~~~y~G~l~~~~m~t~~--gp~viE~N~R~--GDPE~ 288 (424)
T Consensus 239 E-------------TPAP~LP~~~R~~L~~-----AA~~Lg~-~V~YrSAGTVEFiYD~~~d~FYFLEVNTRLQVEHPvT 299 (1226)
T TIGR02712 239 E-------------TPAPNLPEETRAALLA-----AAEKLGE-AVNYRSAGTVEFIYDEARDEFYFLEVNTRLQVEHPVT 299 (1226)
T ss_pred E-------------CCCCCCCHHHHHHHHH-----HHHHHHH-HHCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCE
T ss_conf 2-------------7746864899999999-----9999999-7187637604774022108712113234111335730
Q ss_pred EEEEECCCCCCHHHHHHHHHCCCCCC-CCCC---C----CCCEEEEEECCCCCCCCCCCCCCC-CCCCCCCCCCEEEEEE
Q ss_conf 04433265441156665420133332-1234---4----442067542254466877579762-4876668986899833
Q gi|254780206|r 289 QAMMMRLESDILEILNSCVHGNLHNT-HINW---K----AEYALTVVVATKGYPEEYPHGTII-SKIPQNTGTTQLFHAG 359 (424)
Q Consensus 289 q~ilp~L~~dl~~il~~~~~g~L~~~-~~~~---~----~~~~v~Vvlas~GYP~~~~kg~~I-~~l~~~~~~~~ifhag 359 (424)
T Consensus 300 E~V---tGlDLVEWM~r~AAg~~p~~~~~~~~~~~~l~p~G~aiEa----RvYAEnP~k~F~PSpG~Lt---~-V~FP~~ 368 (1226)
T TIGR02712 300 EMV---TGLDLVEWMVRIAAGELPDFDSLNIEIFDNLTPRGAAIEA----RVYAENPAKNFQPSPGLLT---E-VQFPDD 368 (1226)
T ss_pred EEE---ECCHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCEEEEEE----EEEEECCCCCCCCCCCEEE---E-EECCCC
T ss_conf 178---4640898999971688888524430003578875038999----9844077677726986068---8-772788
Q ss_pred --E-EEECCEEEECCCCE--------EEEEEECCCHHHHHHHHHHHHHCCCCCCC
Q ss_conf --5-87788799818807--------99999628989999999999852589995
Q gi|254780206|r 360 --T-AIVNNNLTANGGRV--------LSATALGKTITESRELAYHMVENIDWKHG 403 (424)
Q Consensus 360 --t-~~~~g~l~t~GGRV--------L~vv~~g~~l~eA~~~ay~~i~~I~~~g~ 403 (424)
T Consensus 369 ~G~~~Rv-DTWV~~Gtevsp~YDPmlAKiIv~g~~R~~A~~kL~~AL~~T~v~Gi 422 (1226)
T TIGR02712 369 GGKAVRV-DTWVETGTEVSPEYDPMLAKIIVHGKDREDAIAKLSQALDETRVYGI 422 (1226)
T ss_pred CCCEEEE-ECEECCCCEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEE
T ss_conf 8953787-02112783567765874244664367978999999988730101235