HHsearch alignment for GI: 254780206 and conserved domain: pfam03133
>pfam03133 TTL Tubulin-tyrosine ligase family. Tubulins and microtubules are subjected to several post-translational modifications of which the reversible detyrosination/tyrosination of the carboxy-terminal end of most alpha-tubulins has been extensively analysed. This modification cycle involves a specific carboxypeptidase and the activity of the tubulin-tyrosine ligase (TTL). The true physiological function of TTL has so far not been established. Tubulin-tyrosine ligase (TTL) catalyses the ATP-dependent post-translational addition of a tyrosine to the carboxy terminal end of detyrosinated alpha-tubulin. In normally cycling cells, the tyrosinated form of tubulin predominates. However, in breast cancer cells, the detyrosinated form frequently predominates, with a correlation to tumour aggressiveness. On the other hand, 3-nitrotyrosine has been shown to be incorporated, by TTL, into the carboxy terminal end of detyrosinated alpha-tubulin. This reaction is not reversible by the carboxypep
Probab=95.90 E-value=0.0098 Score=39.76 Aligned_cols=41 Identities=17% Similarity=0.472 Sum_probs=31.4
Q ss_pred CEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Q ss_conf 20256304653430002323567788878875144531777887752
Q gi|254780206|r 138 MPIVVKADGLCAGKGVVVAATVDEATSAIDRCFQQINSTVIIEEYLE 184 (424)
Q Consensus 138 ~PvVVKp~~~agGkGV~i~~~~~e~~~~~~~~~~~~~~~VliEefl~ 184 (424)
T Consensus 67 ~~wI~KP~~~~~G~GI~l~~~~~~i~~~~~------~~~~VvQkYI~ 107 (291)
T pfam03133 67 NTWIVKPSASARGRGIRITNDLSQILKQIQ------SRPLVVQKYIE 107 (291)
T ss_pred CEEEEEECCCCCCCCEEEECCHHHHHHHHC------CCCEEEEECCC
T ss_conf 769991177689899698379999766523------79889752057