Query gi|254780209|ref|YP_003064622.1| hypothetical protein CLIBASIA_00470 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 51
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 13730
Date Mon May 23 17:01:09 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780209.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1k1va_ a.37.1.1 (A:) Mafg {Mo 39.4 9.5 0.00069 18.0 2.6 24 27-50 18-41 (41)
2 d1gsua1 a.45.1.1 (A:85-217) Cl 24.9 26 0.0019 15.7 3.1 19 29-47 3-21 (133)
3 d1gsaa1 c.30.1.3 (A:1-122) Pro 18.3 20 0.0015 16.3 1.1 26 4-29 93-118 (122)
4 d2gsta1 a.45.1.1 (A:85-217) Cl 15.4 44 0.0032 14.6 3.0 19 29-47 3-21 (133)
5 d1bgva2 c.58.1.1 (A:1-194) Glu 15.0 45 0.0033 14.5 2.3 25 19-44 125-149 (194)
6 d2c4ja1 a.45.1.1 (A:86-218) Cl 14.3 47 0.0034 14.4 3.2 19 29-47 3-21 (133)
7 d1rr7a_ a.4.1.14 (A:) Middle o 12.0 52 0.0038 14.2 1.9 30 16-45 35-64 (94)
8 d2fhea1 a.45.1.1 (A:81-216) Cl 10.5 63 0.0046 13.8 3.1 19 29-47 2-20 (136)
9 d1oe8a1 a.45.1.1 (A:85-207) Cl 8.5 76 0.0055 13.4 3.0 17 29-45 2-18 (123)
10 d1duga1 a.45.1.1 (A:81-220) Cl 8.0 80 0.0058 13.2 3.1 17 29-45 2-18 (140)
No 1
>d1k1va_ a.37.1.1 (A:) Mafg {Mouse (Mus musculus) [TaxId: 10090]}
Probab=39.42 E-value=9.5 Score=17.99 Aligned_cols=24 Identities=38% Similarity=0.533 Sum_probs=19.9
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 899987899899999999986304
Q gi|254780209|r 27 PKGPSKEEQARIEQIRAEARERRY 50 (51)
Q Consensus 27 pkgpskeeqarieqiraearerry 50 (51)
-+|-||||..++.|.|-.-..|-|
T Consensus 18 Lrgl~keev~~lKqrRRTLKNRGY 41 (41)
T d1k1va_ 18 LRGLSKEEIIQLKQRRRTLKNRGY 41 (41)
T ss_dssp HTTSCHHHHHHHHHHHHHHTTSCC
T ss_pred HCCCCHHHHHHHHHHHHHHHCCCC
T ss_conf 718999999999999986611798
No 2
>d1gsua1 a.45.1.1 (A:85-217) Class mu GST {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=24.89 E-value=26 Score=15.73 Aligned_cols=19 Identities=16% Similarity=0.421 Sum_probs=13.3
Q ss_pred CCCHHHHHHHHHHHHHHHH
Q ss_conf 9987899899999999986
Q gi|254780209|r 29 GPSKEEQARIEQIRAEARE 47 (51)
Q Consensus 29 gpskeeqarieqiraeare 47 (51)
|.+.+|++|+++|.....+
T Consensus 3 Gkt~~E~~~vd~i~~~~~D 21 (133)
T d1gsua1 3 GETEVEKQRVDVLENHLMD 21 (133)
T ss_dssp CCSHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHH
T ss_conf 9699999999999999999
No 3
>d1gsaa1 c.30.1.3 (A:1-122) Prokaryotic glutathione synthetase, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=18.26 E-value=20 Score=16.33 Aligned_cols=26 Identities=23% Similarity=0.542 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHHHCCCEECCCCCC
Q ss_conf 78999999986655304201258899
Q gi|254780209|r 4 KSLLMVAYLLSSVAISGGLCFNRPKG 29 (51)
Q Consensus 4 ksllmvayllssvaisgglcfnrpkg 29 (51)
...+...|+|..+.-.|-+.+|.|.|
T Consensus 93 ~~Yl~~T~lL~~~~~~g~~ViN~P~~ 118 (122)
T d1gsaa1 93 TEFIYATYILERAEEKGTLIVNKPQS 118 (122)
T ss_dssp HHHHHHHHHHHHHHHTTCEEESCHHH
T ss_pred HHHHHHHHHHHHHHHCCCEEECCCHH
T ss_conf 79999999998650469789819277
No 4
>d2gsta1 a.45.1.1 (A:85-217) Class mu GST {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=15.38 E-value=44 Score=14.59 Aligned_cols=19 Identities=21% Similarity=0.482 Sum_probs=12.8
Q ss_pred CCCHHHHHHHHHHHHHHHH
Q ss_conf 9987899899999999986
Q gi|254780209|r 29 GPSKEEQARIEQIRAEARE 47 (51)
Q Consensus 29 gpskeeqarieqiraeare 47 (51)
|.+.+|+++++++..+..+
T Consensus 3 Gkt~~E~~~vd~l~~~~~D 21 (133)
T d2gsta1 3 GETEEERIRADIVENQVMD 21 (133)
T ss_dssp CSSHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHH
T ss_conf 9899999999999999999
No 5
>d1bgva2 c.58.1.1 (A:1-194) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}
Probab=14.96 E-value=45 Score=14.53 Aligned_cols=25 Identities=36% Similarity=0.490 Sum_probs=18.2
Q ss_pred CCCEECCCCCCCCHHHHHHHHHHHHH
Q ss_conf 04201258899987899899999999
Q gi|254780209|r 19 SGGLCFNRPKGPSKEEQARIEQIRAE 44 (51)
Q Consensus 19 sgglcfnrpkgpskeeqarieqirae 44 (51)
.||+++| |+..|.+|.-|+-+--..
T Consensus 125 Kggi~~d-P~~~s~~el~r~~r~~~~ 149 (194)
T d1bgva2 125 KGGSDFD-PNGKSDREVMRFCQAFMT 149 (194)
T ss_dssp EEEESCC-CTTCCHHHHHHHHHHHHH
T ss_pred CCEECCC-CCCCCHHHHHHHHHHHHH
T ss_conf 4312369-889999999999999999
No 6
>d2c4ja1 a.45.1.1 (A:86-218) Class mu GST {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.29 E-value=47 Score=14.43 Aligned_cols=19 Identities=26% Similarity=0.393 Sum_probs=12.5
Q ss_pred CCCHHHHHHHHHHHHHHHH
Q ss_conf 9987899899999999986
Q gi|254780209|r 29 GPSKEEQARIEQIRAEARE 47 (51)
Q Consensus 29 gpskeeqarieqiraeare 47 (51)
|.+.+|+++|+++.....+
T Consensus 3 G~t~~E~a~vD~~~~~v~D 21 (133)
T d2c4ja1 3 GESEKEQIREDILENQFMD 21 (133)
T ss_dssp CCSHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHH
T ss_conf 9799999999999999999
No 7
>d1rr7a_ a.4.1.14 (A:) Middle operon regulator, Mor {Bacteriophage Mu [TaxId: 10677]}
Probab=12.00 E-value=52 Score=14.21 Aligned_cols=30 Identities=20% Similarity=0.183 Sum_probs=24.7
Q ss_pred HHHCCCEECCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 553042012588999878998999999999
Q gi|254780209|r 16 VAISGGLCFNRPKGPSKEEQARIEQIRAEA 45 (51)
Q Consensus 16 vaisgglcfnrpkgpskeeqarieqiraea 45 (51)
..--||-.|.-|+|-+-..+.|-.+|+.+-
T Consensus 35 ~~~~gG~~lYiP~~~~~~~~~Rn~~I~~ef 64 (94)
T d1rr7a_ 35 CKHLGGGQVYIPRGQALDSLIRDLRIWNDF 64 (94)
T ss_dssp HHHHCSSCCCCCCSHHHHHHHHHHHHHHHC
T ss_pred HHHHCCEEEEEECCHHHHHHHHHHHHHHHH
T ss_conf 999799447630608889999999999990
No 8
>d2fhea1 a.45.1.1 (A:81-216) Class alpha GST {Fasciola hepatica [TaxId: 6192]}
Probab=10.51 E-value=63 Score=13.79 Aligned_cols=19 Identities=37% Similarity=0.604 Sum_probs=11.0
Q ss_pred CCCHHHHHHHHHHHHHHHH
Q ss_conf 9987899899999999986
Q gi|254780209|r 29 GPSKEEQARIEQIRAEARE 47 (51)
Q Consensus 29 gpskeeqarieqiraeare 47 (51)
|-+.+|++||+++.....+
T Consensus 2 G~t~~E~~~vD~i~~~~~D 20 (136)
T d2fhea1 2 GTTSEERARVSMIEGAAVD 20 (136)
T ss_dssp CSSHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHH
T ss_conf 8999999999999979999
No 9
>d1oe8a1 a.45.1.1 (A:85-207) Class alpha GST {Blood fluke (Schistosoma haematobium) [TaxId: 6185]}
Probab=8.51 E-value=76 Score=13.37 Aligned_cols=17 Identities=29% Similarity=0.481 Sum_probs=8.4
Q ss_pred CCCHHHHHHHHHHHHHH
Q ss_conf 99878998999999999
Q gi|254780209|r 29 GPSKEEQARIEQIRAEA 45 (51)
Q Consensus 29 gpskeeqarieqiraea 45 (51)
|-+.+|+++|++|-...
T Consensus 2 G~~~~E~~~vD~i~~~~ 18 (123)
T d1oe8a1 2 GGTEEEYYNVEKLIGQA 18 (123)
T ss_dssp CSSHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHH
T ss_conf 79999999999999599
No 10
>d1duga1 a.45.1.1 (A:81-220) Class alpha GST {Schistosoma japonicum [TaxId: 6182]}
Probab=7.99 E-value=80 Score=13.25 Aligned_cols=17 Identities=24% Similarity=0.405 Sum_probs=8.0
Q ss_pred CCCHHHHHHHHHHHHHH
Q ss_conf 99878998999999999
Q gi|254780209|r 29 GPSKEEQARIEQIRAEA 45 (51)
Q Consensus 29 gpskeeqarieqiraea 45 (51)
|-..+|+++|+++....
T Consensus 2 G~t~~E~a~id~i~~~v 18 (140)
T d1duga1 2 GGCPKERAEISMLEGAV 18 (140)
T ss_dssp CSSHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHH
T ss_conf 89999999999999999
Done!