RPS-BLAST 2.2.22 [Sep-27-2009] Database: mmdb70 33,805 sequences; 4,956,049 total letters Searching..................................................done Query= gi|254780209|ref|YP_003064622.1| hypothetical protein CLIBASIA_00470 [Candidatus Liberibacter asiaticus str. psy62] (51 letters) >2npn_A Putative cobalamin synthesis related protein; COBF, PSI-2, MAD, structural genomics, SAM, S-adenosylmethionine, MCSG; HET: MSE SAM; 1.60A {Corynebacterium diphtheriae} (A:143-251) Length = 109 Score = 27.3 bits (61), Expect = 0.82 Identities = 5/22 (22%), Positives = 11/22 (50%) Query: 28 KGPSKEEQARIEQIRAEARERR 49 KG E A++ +++ + R Sbjct: 75 KGYVHEIGAQVAELKQQLRTEH 96 Database: mmdb70 Posted date: Jun 20, 2010 3:12 AM Number of letters in database: 4,956,049 Number of sequences in database: 33,805 Lambda K H 0.319 0.132 0.361 Gapped Lambda K H 0.267 0.0606 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 33805 Number of Hits to DB: 332,953 Number of extensions: 9053 Number of successful extensions: 52 Number of sequences better than 10.0: 1 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 5 Length of query: 51 Length of database: 4,956,049 Length adjustment: 22 Effective length of query: 29 Effective length of database: 4,212,339 Effective search space: 122157831 Effective search space used: 122157831 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 50 (23.3 bits)