RPS-BLAST 2.2.22 [Sep-27-2009] Database: CddB 21,608 sequences; 5,994,473 total letters Searching..................................................done Query= gi|254780210|ref|YP_003064623.1| hypothetical protein CLIBASIA_00475 [Candidatus Liberibacter asiaticus str. psy62] (57 letters) >gnl|CDD|181714 PRK09231, PRK09231, fumarate reductase flavoprotein subunit; Validated. Length = 582 Score = 25.0 bits (55), Expect = 4.3 Identities = 13/58 (22%), Positives = 22/58 (37%), Gaps = 10/58 (17%) Query: 5 RYGS-----LSDHGKVAGEEAPRKKSEQPKREPQPQQENRKFIRRSEISTRTHSLSDH 57 R GS L G+VAGE+A + + P + ++ R +L + Sbjct: 390 RLGSNSLAELVVFGRVAGEQAAERAATAG---PGNEAALDAQAA--DVEQRLKALVNQ 442 Database: CddB Posted date: Feb 4, 2011 9:54 PM Number of letters in database: 5,994,473 Number of sequences in database: 21,608 Lambda K H 0.308 0.124 0.342 Gapped Lambda K H 0.267 0.0529 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 21608 Number of Hits to DB: 844,813 Number of extensions: 34475 Number of successful extensions: 67 Number of sequences better than 10.0: 1 Number of HSP's gapped: 67 Number of HSP's successfully gapped: 7 Length of query: 57 Length of database: 5,994,473 Length adjustment: 29 Effective length of query: 28 Effective length of database: 5,367,841 Effective search space: 150299548 Effective search space used: 150299548 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits) S2: 50 (23.5 bits)